Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 3.2e-164 581.6 288 100.0
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 6.3e-160 567.4 288 98.3
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 6.0e-118 427.9 290 73.4
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 3.6e-115 418.7 280 73.9
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 4.7e-115 418.3 283 75.6
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 8.1e-115 417.5 289 73.4
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 1.5e-113 413.3 283 73.1
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 5.8e-113 411.4 277 75.1
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 3.8e-112 408.7 280 72.9
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 4.2e-111 405.2 285 71.2
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 5.1e-109 398.3 277 71.8
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 2.7e-102 375.9 278 68.3
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 1.7e-101 373.2 280 65.4
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.5e-100 370.2 280 67.5
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 2.5e-100 369.4 284 66.5
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 7.4e-100 367.9 275 66.2
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 7.4e-100 367.9 287 65.2
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 2.1e-99 366.3 271 67.9
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 8.1e-99 364.4 272 66.2
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 8.1e-99 364.4 279 63.8
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 1.8e-98 363.2 280 64.6
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 1.8e-98 363.2 280 64.6
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 2.4e-98 362.8 273 67.4
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 2.4e-98 362.8 283 65.4
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 2.4e-98 362.8 271 67.5
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 3.1e-98 362.5 288 65.3
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 5.3e-98 361.7 276 67.0
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 6.9e-98 361.3 291 64.3
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.2e-97 360.5 283 64.3
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.2e-97 360.5 283 64.3
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 1.2e-97 360.5 276 65.9
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 2.0e-97 359.8 277 66.1
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 2.6e-97 359.4 277 66.1
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 3.4e-97 359.0 268 66.8
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 3.4e-97 359.0 278 66.9
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 5.8e-97 358.2 290 63.4
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 5.8e-97 358.2 283 64.7
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 7.6e-97 357.8 275 64.7
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 2.2e-96 356.3 281 64.1
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 2.2e-96 356.3 281 64.1
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 2.2e-96 356.3 291 62.2
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 3.8e-96 355.5 281 64.1
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 4.9e-96 355.1 280 64.6
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 4.9e-96 355.1 285 64.2
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 4.9e-96 355.1 268 67.9
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 6.4e-96 354.8 268 66.8
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 8.4e-96 354.4 268 67.2
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 8.4e-96 354.4 280 63.9
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 8.4e-96 354.4 279 63.4
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 1.1e-95 354.0 263 68.4
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 1.1e-95 354.0 274 62.8
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 2.4e-95 352.8 275 65.5
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 3.2e-95 352.4 269 67.3
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 3.2e-95 352.4 269 67.3
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.6e-94 350.1 274 64.2
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 1.6e-94 350.1 281 59.8
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 2.1e-94 349.7 277 64.3
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 2.7e-94 349.4 300 59.7
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 3.5e-94 349.0 269 66.9
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 4.6e-94 348.6 285 62.5
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 2.3e-93 346.3 286 59.8
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 2.3e-93 346.3 347 54.8
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 6.7e-93 344.7 290 61.0
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 6.7e-93 344.7 290 61.0
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 1.1e-92 344.0 283 61.5
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 2.5e-92 342.8 267 64.4
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 4.3e-92 342.0 274 63.5
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 5.6e-92 341.7 268 66.0
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 7.4e-92 341.3 267 64.0
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 9.6e-92 340.9 274 63.5
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 9.6e-92 340.9 293 62.8
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 1.3e-91 340.5 292 59.9
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.3e-91 340.5 274 63.1
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 2.8e-91 339.3 290 60.0
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 6.2e-91 338.2 259 65.3
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 2.0e-89 333.2 290 59.3
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 5.8e-89 331.6 288 60.4
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 3.8e-88 328.9 268 63.4
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 1.4e-87 327.0 269 61.3
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 1.9e-87 326.6 279 61.6
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 7.1e-87 324.7 273 60.8
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.8e-85 320.1 276 60.5
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 2.3e-85 319.7 282 60.3
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 1.8e-82 310.1 278 61.9
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 3.1e-82 309.3 294 59.9
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 1.0e-80 304.3 267 60.3
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 4.2e-79 298.9 259 56.4
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 4.2e-79 298.9 279 54.5
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 7.9e-78 294.7 277 54.2
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 5.9e-73 278.5 198 66.7
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 2.1e-70 270.0 170 74.1
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 2.8e-67 259.6 182 72.5
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 4.1e-66 255.8 178 67.4
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 5.3e-66 255.4 175 72.0
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 1.7e-59 233.8 176 65.9
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 2.2e-59 233.4 182 64.8
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 2.0e-57 226.9 265 47.5
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 2.6e-57 226.5 193 60.6
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 1.7e-56 223.8 270 45.9
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.5e-55 220.7 135 75.6
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 4.4e-52 209.1 273 45.1
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 1.2e-49 201.1 274 42.3
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 7.2e-47 191.8 156 64.7
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.0e-45 188.0 260 46.5
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 6.3e-43 178.7 215 46.5
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 9.8e-36 154.8 282 36.9
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 4.1e-34 149.4 279 36.9
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.3e-32 144.4 146 51.4
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 4.1e-26 122.9 78 73.1
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 3.9e-24 116.3 90 57.8
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 3.3e-23 113.2 145 43.4
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.9e-18 97.4 172 40.1
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 2.0e-17 94.0 273 28.9
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 3.0e-16 90.1 65 63.1
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 7.3e-15 85.5 75 57.3
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 9.5e-15 85.1 83 55.4
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.0e-13 79.7 173 35.3
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 3.9e-08 63.2 74 45.9
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 8.6e-08 62.0 76 43.4


User provided reference genes

Program Settings