Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.9BC44J Arachis hypogaea HOM05D005926 ORTHO05D007001 0.0e+00 1092.0 564 100.0
arahy.Tifrunner.gnm1.ann1.J9ASUV Arachis hypogaea HOM05D005926 ORTHO05D007001 1.4e-304 1048.9 564 96.6
Glyma.10G202600 Glycine max HOM05D005926 ORTHO05D007001 2.8e-119 433.3 596 49.7
Lalb_Chr03g0036371 Lupinus albus HOM05D005926 ORTHO05D007001 9.0e-118 428.3 591 50.1
Glyma.20G187800 Glycine max HOM05D005926 ORTHO05D007001 3.4e-117 426.4 586 49.3
Ca_10497_v3 Cicer arietinum L. HOM05D005926 ORTHO05D007001 7.9e-114 415.2 602 48.8
VMungo0720G0267 Vigna mungo HOM05D005926 ORTHO05D007001 4.0e-110 402.9 603 47.4
Medtr1g492840 Medicago truncatula HOM05D005926 ORTHO05D007001 4.5e-109 399.4 602 46.3
Phvul.007G104500 Phaseolus vulgaris HOM05D005926 ORTHO05D007001 3.2e-107 393.3 603 47.3
Lj5g0002236 Lotus japonicus HOM05D005926 ORTHO05D007001 2.7e-106 390.2 604 47.8
TPR.G2562 Trifolium pratense HOM05D005926 ORTHO05D007001 1.0e-100 371.7 578 45.2
Psat6g176680 Pisum sativum HOM05D005926 ORTHO05D007001 3.2e-99 366.7 523 49.1
Prupe.2G085400 Prunus persica HOM05D005926 ORTHO05D007001 8.0e-74 282.3 505 44.0
MD02G1248000 Malus domestica HOM05D005926 ORTHO05D007001 9.7e-72 275.4 523 41.7
MD07G1068100 Malus domestica HOM05D005926 ORTHO05D007001 8.5e-68 262.3 468 43.4
QL04p042256 Quercus lobata HOM05D005926 ORTHO05D007001 1.8e-65 254.6 607 37.7
FvH4_7g05860 Fragaria vesca HOM05D005926 ORTHO05D007001 8.8e-65 252.3 508 41.3
FAN10G2760 Fragaria x ananassa HOM05D005926 ORTHO05D007001 1.2e-64 251.9 508 42.1
Thecc.10G111000 Theobroma cacao HOM05D005926 ORTHO05D007001 4.8e-63 246.5 510 39.4
FAN03G1852 Fragaria x ananassa HOM05D005926 ORTHO05D007001 2.0e-61 241.1 547 39.5
RcHm_v2.0_Chr1g0333121 Rosa chinensis HOM05D005926 ORTHO05D007001 2.9e-60 237.3 477 41.5
TWI63G0673 Tripterygium wilfordii HOM05D005926 ORTHO05D007001 3.2e-59 233.8 618 36.9
COL.COLO4_06813 Corchorus olitorius HOM05D005926 ORTHO05D007001 7.2e-59 232.6 600 37.2
Atru.chr12.975 Acer truncatum HOM05D005926 ORTHO05D007001 2.7e-58 230.7 611 36.8
Manes.07G090100 Manihot esculenta HOM05D005926 ORTHO05D007001 6.1e-58 229.6 617 36.5
Ciclev10030805m.g Citrus clementina HOM05D005926 ORTHO05D007001 4.0e-57 226.9 568 37.1
Duzib128G1763 Durio zibethinus HOM05D005926 ORTHO05D007001 2.0e-56 224.6 582 36.3
ClCG08G008140 Citrullus lanatus HOM05D005926 ORTHO05D007001 2.8e-55 220.7 614 35.2
CsaV3_6G004110 Cucumis sativus L. HOM05D005926 ORTHO05D007001 3.7e-55 220.3 493 38.1
MELO3C019887.2 Cucumis melo HOM05D005926 ORTHO05D007001 3.1e-54 217.2 586 35.5
Duzib106G0448 Durio zibethinus HOM05D005926 ORTHO05D007001 2.0e-53 214.5 609 35.8
CiPaw.14G029200 Carya illinoinensis HOM05D005926 ORTHO05D007001 2.7e-53 214.2 640 33.8
Gohir.D04G017400 Gossypium hirsutum HOM05D005926 ORTHO05D007001 2.3e-52 211.1 559 35.8
Gohir.A05G398500 Gossypium hirsutum HOM05D005926 ORTHO05D007001 3.8e-52 210.3 563 35.9
Gorai.012G020100 Gossypium raimondii HOM05D005926 ORTHO05D007001 1.9e-51 208.0 559 36.0
Sed0000046 Sechium edule HOM05D005926 ORTHO05D007001 2.8e-50 204.1 615 33.7
vmacro07227 Vaccinium macrocarpon HOM05D005926 ORTHO05D007001 4.7e-50 203.4 536 35.1
CANSAT56G4130 Cannabis sativa HOM05D005926 ORTHO05D007001 5.2e-49 199.9 593 35.4
Potri.008G025000 Populus trichocarpa HOM05D005926 ORTHO05D007001 2.6e-48 197.6 477 38.4
PGR142G4330 Punica granatum HOM05D005926 ORTHO05D007001 2.6e-48 197.6 588 35.0
SalBow6G1645 Salvia bowleyana HOM05D005926 ORTHO05D007001 3.7e-47 193.7 473 37.4
Eucgr.G02709 Eucalyptus grandis HOM05D005926 ORTHO05D007001 4.1e-46 190.3 480 36.7
Rhsim03G0105700 Rhododendron simsii HOM05D005926 ORTHO05D007001 1.2e-45 188.7 568 34.7
Lj2C28T9 Lonicera japonica HOM05D005926 ORTHO05D007001 2.0e-45 188.0 486 36.2
Migut.F00893 Erythranthe guttata HOM05D005926 ORTHO05D007001 2.7e-45 187.6 465 37.8
Sabra08G0016800 Salix brachista HOM05D005926 ORTHO05D007001 5.9e-45 186.4 624 33.0
arahy.Tifrunner.gnm1.ann1.UA3HQT Arachis hypogaea HOM05D005926 ORTHO05D007001 7.8e-45 186.0 367 41.7
arahy.Tifrunner.gnm1.ann1.L8M84U Arachis hypogaea HOM05D005926 ORTHO05D007001 1.0e-44 185.7 367 41.7
CSS0031315 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 3.9e-44 183.7 644 31.4
GSVIVG01034734001 Vitis vinifera HOM05D005926 ORTHO05D007001 3.9e-44 183.7 668 31.7
TAR623G1319 Trochodendron aralioides HOM05D005926 ORTHO05D007001 2.5e-43 181.0 515 35.0
Sed0009709 Sechium edule HOM05D005926 ORTHO05D007001 5.6e-43 179.9 452 36.7
Dinv30648 Davidia involucrata HOM05D005926 ORTHO05D007001 6.1e-42 176.4 709 29.2
DCAR_014349 Daucus carota HOM05D005926 ORTHO05D007001 1.8e-41 174.9 467 34.7
CSS0031564 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 2.3e-41 174.5 501 33.5
Sabra10G0182600 Salix brachista HOM05D005926 ORTHO05D007001 3.1e-41 174.1 690 31.4
Haze_02593 Corylus avellana HOM05D005926 ORTHO05D007001 8.3e-39 166.0 247 49.4
TAR369G1114 Trochodendron aralioides HOM05D005926 ORTHO05D007001 8.3e-39 166.0 455 36.7
Cc02_g10060 Coffea canephora HOM05D005926 ORTHO05D007001 1.2e-37 162.2 535 31.6
SGA_v2.0_scaffold62G21348 Striga asiatica HOM05D005926 ORTHO05D007001 1.6e-37 161.8 452 34.5
TAR636G3019 Trochodendron aralioides HOM05D005926 ORTHO05D007001 2.7e-37 161.0 479 35.7
Nitab4.5_0003396g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 6.0e-37 159.8 542 32.1
Nitab4.5_0001027g0040 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.7e-36 158.3 583 30.9
PGSC0003DMG400023487 Solanum tuberosum HOM05D005926 ORTHO05D007001 1.7e-36 158.3 471 32.7
CSS0037332 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 2.3e-36 157.9 710 28.6
Nn6g35019 Nelumbo nucifera HOM05D005926 ORTHO05D007001 6.6e-36 156.4 458 34.5
ECA232G4290 Erigeron canadensis HOM05D005926 ORTHO05D007001 1.1e-35 155.6 566 30.4
Actinidia18581 Actinidia chinensis HOM05D005926 ORTHO05D007001 3.3e-35 154.1 488 31.8
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 4.3e-35 153.7 489 31.7
Peaxi162Scf00004g00119 Petunia axillaris HOM05D005926 ORTHO05D007001 7.3e-35 152.9 532 33.1
Sc06g0002210 Simmondsia chinensis HOM05D005926 ORTHO05D007001 9.5e-35 152.5 606 29.4
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 1.2e-34 152.1 710 29.2
Nn2g14047 Nelumbo nucifera HOM05D005926 ORTHO05D007001 1.6e-34 151.8 460 34.8
Hma1.2p1_0010F.1_g007030 Hydrangea macrophylla HOM05D005926 ORTHO05D007001 2.1e-34 151.4 424 37.0
Sopen05g033810 Solanum pennellii HOM05D005926 ORTHO05D007001 2.1e-34 151.4 471 32.3
Nitab4.5_0002878g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 2.3e-33 147.9 481 32.6
Nitab4.5_0012334g0010 Nicotiana tabacum HOM05D005926 ORTHO05D007001 2.3e-33 147.9 470 33.0
CSS0015422 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 8.9e-33 146.0 555 30.1
HanXRQChr05g0147041 Helianthus annuus HOM05D005926 ORTHO05D007001 8.9e-33 146.0 465 33.3
Solyc05g055360.4 Solanum lycopersicum HOM05D005926 ORTHO05D007001 3.4e-32 144.1 463 32.4
Aqoxy4G02869 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 1.2e-29 135.6 492 32.5
Lsat_1_v5_gn_6_90261 Lactuca sativa HOM05D005926 ORTHO05D007001 3.9e-28 130.6 507 32.7
PGSC0003DMG400027309 Solanum tuberosum HOM05D005926 ORTHO05D007001 2.5e-27 127.9 412 33.7
Solyc11g007510.2 Solanum lycopersicum HOM05D005926 ORTHO05D007001 8.1e-26 122.9 422 32.5
THA.LOC104814724 Tarenaya hassleriana HOM05D005926 ORTHO05D007001 2.0e-24 118.2 490 30.4
CARHR161990 Cardamine hirsuta HOM05D005926 ORTHO05D007001 3.4e-24 117.5 493 31.0
AUR62041545 Chenopodium quinoa HOM05D005926 ORTHO05D007001 4.4e-24 117.1 477 29.8
Dinv20819 Davidia involucrata HOM05D005926 ORTHO05D007001 4.4e-24 117.1 360 32.2
Sopen11g003350 Solanum pennellii HOM05D005926 ORTHO05D007001 2.9e-23 114.4 421 30.6
EL10Ac4g08669 Beta vulgaris HOM05D005926 ORTHO05D007001 3.7e-23 114.0 470 30.2
Actinidia28534 Actinidia chinensis HOM05D005926 ORTHO05D007001 6.4e-23 113.2 416 29.8
Thhalv10010215m.g Eutrema salsugineum HOM05D005926 ORTHO05D007001 1.1e-22 112.5 484 29.3
PSO339G4155 Papaver somniferum HOM05D005926 ORTHO05D007001 3.2e-22 110.9 477 31.4
CDE04G2986 Ceratophyllum demersum HOM05D005926 ORTHO05D007001 6.0e-21 106.7 491 32.0
PSO384G0761 Papaver somniferum HOM05D005926 ORTHO05D007001 6.0e-21 106.7 480 29.4
Aqoxy2G01361 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 7.8e-21 106.3 482 31.5
AL5G32830 Arabidopsis lyrata HOM05D005926 ORTHO05D007001 3.0e-20 104.4 615 28.3
Ah.04g163700 Amaranthus hybridus HOM05D005926 ORTHO05D007001 1.1e-19 102.4 477 28.9
Carub.0005s1860 Capsella rubella HOM05D005926 ORTHO05D007001 1.9e-19 101.7 499 29.5
BcaC07g39594 Brassica carinata HOM05D005926 ORTHO05D007001 2.5e-19 101.3 473 28.5
C08p27480 Brassica napus HOM05D005926 ORTHO05D007001 2.5e-19 101.3 473 28.5
BolC8t50365H Brassica oleracea HOM05D005926 ORTHO05D007001 2.5e-19 101.3 473 28.5
Os05g0445800 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 3.3e-19 100.9 629 27.2
BcaB02g08582 Brassica carinata HOM05D005926 ORTHO05D007001 1.2e-18 99.0 486 29.2
Sp5g10020 Schrenkiella parvula HOM05D005926 ORTHO05D007001 2.1e-18 98.2 498 27.1
Aa31LG10G7340 Aethionema arabicum HOM05D005926 ORTHO05D007001 2.8e-18 97.8 475 27.8
A09p45300 Brassica napus HOM05D005926 ORTHO05D007001 1.8e-17 95.1 475 28.2
BraA09t39993Z Brassica rapa HOM05D005926 ORTHO05D007001 5.2e-17 93.6 475 28.2
AT3G52240 Arabidopsis thaliana HOM05D005926 ORTHO05D007001 8.9e-17 92.8 615 27.5
C04p40700 Brassica napus HOM05D005926 ORTHO05D007001 7.6e-16 89.7 475 28.4
BcaC02g09269 Brassica carinata HOM05D005926 ORTHO05D007001 3.8e-15 87.4 474 28.5
BolC4t25653H Brassica oleracea HOM05D005926 ORTHO05D007001 4.9e-15 87.0 474 28.5
Haze_02594 Corylus avellana HOM05D005926 ORTHO05D007001 8.4e-15 86.3 389 27.5
A04p07120 Brassica napus HOM05D005926 ORTHO05D007001 4.6e-13 80.5 485 28.2
BraA04t16409Z Brassica rapa HOM05D005926 ORTHO05D007001 1.7e-12 78.6 487 28.1
PSO443G0029 Papaver somniferum HOM05D005926 ORTHO05D007001 8.7e-12 76.3 270 33.3
Os05g0446500 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 2.8e-10 71.2 627 25.5
unitig_0.g760 Utricularia gibba HOM05D005926 ORTHO05D007001 4.0e-09 67.4 455 28.6


User provided reference genes

Program Settings