Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.99VT9P Arachis hypogaea HOM05D000361 ORTHO05D004243 1.5e-110 402.9 205 100.0
arahy.Tifrunner.gnm1.ann1.Z1FAFN Arachis hypogaea HOM05D000361 ORTHO05D004243 5.1e-95 351.3 256 74.6
arahy.Tifrunner.gnm1.ann1.G7NAMC Arachis hypogaea HOM05D000361 ORTHO05D004243 2.0e-91 339.3 224 81.7
arahy.Tifrunner.gnm1.ann1.N0EKR1 Arachis hypogaea HOM05D000361 ORTHO05D004243 2.0e-91 339.3 224 81.7
arahy.Tifrunner.gnm1.ann1.3FW809 Arachis hypogaea HOM05D000361 ORTHO05D004243 3.8e-82 308.5 224 76.3
Glyma.10G013400 Glycine max HOM05D000361 ORTHO05D004243 7.9e-80 300.8 224 73.2
Ca_10285_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 1.8e-79 299.7 227 72.2
TPR.G19758 Trifolium pratense HOM05D000361 ORTHO05D004243 3.0e-79 298.9 225 72.4
Lj5g0013347 Lotus japonicus HOM05D000361 ORTHO05D004243 5.1e-79 298.1 224 73.2
Medtr1g087100 Medicago truncatula HOM05D000361 ORTHO05D004243 3.3e-78 295.4 226 71.7
Glyma.02G012800 Glycine max HOM05D000361 ORTHO05D004243 4.3e-78 295.0 224 72.8
Phvul.007G214400 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 4.3e-78 295.0 224 71.4
Lalb_Chr06g0166851 Lupinus albus HOM05D000361 ORTHO05D004243 5.6e-78 294.7 226 71.7
Psat6g161800 Pisum sativum HOM05D000361 ORTHO05D004243 9.6e-78 293.9 227 70.9
VMungo0720G0598 Vigna mungo HOM05D000361 ORTHO05D004243 8.1e-77 290.8 224 71.0
arahy.Tifrunner.gnm1.ann1.66RZQ8 Arachis hypogaea HOM05D000361 ORTHO05D004243 4.9e-74 281.6 226 68.6
arahy.Tifrunner.gnm1.ann1.KULZ0F Arachis hypogaea HOM05D000361 ORTHO05D004243 4.9e-74 281.6 226 68.6
Haze_05039 Corylus avellana HOM05D000361 ORTHO05D004243 1.1e-73 280.4 228 68.4
CiPaw.07G117400 Carya illinoinensis HOM05D000361 ORTHO05D004243 7.1e-73 277.7 227 68.3
RcHm_v2.0_Chr7g0241471 Rosa chinensis HOM05D000361 ORTHO05D004243 7.1e-73 277.7 226 68.1
TAR633G1939 Trochodendron aralioides HOM05D000361 ORTHO05D004243 7.1e-73 277.7 224 68.3
Eucgr.H00929 Eucalyptus grandis HOM05D000361 ORTHO05D004243 2.1e-72 276.2 225 68.9
FAN18G4464 Fragaria x ananassa HOM05D000361 ORTHO05D004243 2.7e-72 275.8 226 67.3
MD03G1295300 Malus domestica HOM05D000361 ORTHO05D004243 2.7e-72 275.8 226 68.1
CANSAT25G2078 Cannabis sativa HOM05D000361 ORTHO05D004243 4.6e-72 275.0 224 69.2
Thecc.01G313200 Theobroma cacao HOM05D000361 ORTHO05D004243 4.6e-72 275.0 224 68.8
FAN08G2818 Fragaria x ananassa HOM05D000361 ORTHO05D004243 6.0e-72 274.6 226 67.3
QL12p019966 Quercus lobata HOM05D000361 ORTHO05D004243 6.0e-72 274.6 228 67.5
FvH4_5g39210 Fragaria vesca HOM05D000361 ORTHO05D004243 7.9e-72 274.2 226 67.3
MELO3C023707.2 Cucumis melo HOM05D000361 ORTHO05D004243 1.0e-71 273.9 227 67.4
CsaV3_7G025080 Cucumis sativus L. HOM05D000361 ORTHO05D004243 1.0e-71 273.9 227 67.4
Prupe.5G007800 Prunus persica HOM05D000361 ORTHO05D004243 1.3e-71 273.5 226 67.3
Potri.002G196300 Populus trichocarpa HOM05D000361 ORTHO05D004243 3.9e-71 271.9 224 67.0
CSS0012467 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 5.1e-71 271.6 209 70.3
VMungo1383G3239 Vigna mungo HOM05D000361 ORTHO05D004243 5.1e-71 271.6 224 66.5
Hma1.2p1_0486F.1_g163260 Hydrangea macrophylla HOM05D000361 ORTHO05D004243 6.7e-71 271.2 232 65.1
Phvul.001G212700 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 6.7e-71 271.2 224 66.1
Manes.01G227700 Manihot esculenta HOM05D000361 ORTHO05D004243 8.7e-71 270.8 224 68.3
AUR62011807 Chenopodium quinoa HOM05D000361 ORTHO05D004243 1.9e-70 269.6 227 66.5
Duzib133G0716 Durio zibethinus HOM05D000361 ORTHO05D004243 1.9e-70 269.6 224 67.4
Ciclev10010795m.g Citrus clementina HOM05D000361 ORTHO05D004243 2.5e-70 269.2 224 67.4
THA.LOC104801306 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 3.3e-70 268.9 224 67.0
Aa31LG5G1680 Aethionema arabicum HOM05D000361 ORTHO05D004243 4.3e-70 268.5 224 68.3
Nn4g25601 Nelumbo nucifera HOM05D000361 ORTHO05D004243 4.3e-70 268.5 224 65.6
AL6G51220 Arabidopsis lyrata HOM05D000361 ORTHO05D004243 5.6e-70 268.1 224 67.9
CSS0010179 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 7.4e-70 267.7 226 67.3
CSS0030911 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 7.4e-70 267.7 226 67.3
Sp6g01910 Schrenkiella parvula HOM05D000361 ORTHO05D004243 7.4e-70 267.7 224 67.9
Duzib138G1700 Durio zibethinus HOM05D000361 ORTHO05D004243 9.6e-70 267.3 224 67.0
Thhalv10028443m.g Eutrema salsugineum HOM05D000361 ORTHO05D004243 9.6e-70 267.3 224 67.9
PGR119G2139 Punica granatum HOM05D000361 ORTHO05D004243 9.6e-70 267.3 224 67.4
vmacro15111 Vaccinium macrocarpon HOM05D000361 ORTHO05D004243 9.6e-70 267.3 226 67.3
CARHR249640 Cardamine hirsuta HOM05D000361 ORTHO05D004243 1.3e-69 266.9 224 67.9
Ah.10g031040 Amaranthus hybridus HOM05D000361 ORTHO05D004243 1.6e-69 266.5 226 65.9
AT4G02030 Arabidopsis thaliana HOM05D000361 ORTHO05D004243 2.1e-69 266.2 224 67.4
Gorai.008G139800 Gossypium raimondii HOM05D000361 ORTHO05D004243 2.1e-69 266.2 224 66.1
COL.COLO4_23233 Corchorus olitorius HOM05D000361 ORTHO05D004243 2.8e-69 265.8 224 67.0
Peaxi162Scf00691g00222 Petunia axillaris HOM05D000361 ORTHO05D004243 2.8e-69 265.8 227 65.2
Actinidia25847 Actinidia chinensis HOM05D000361 ORTHO05D004243 3.7e-69 265.4 225 66.2
Cfa005802 Carpinus fangiana HOM05D000361 ORTHO05D005006 4.8e-69 265.0 228 65.8
AUR62024653 Chenopodium quinoa HOM05D000361 ORTHO05D004243 4.8e-69 265.0 227 65.6
Gohir.A12G125100 Gossypium hirsutum HOM05D000361 ORTHO05D004243 4.8e-69 265.0 224 66.1
Sed0012026 Sechium edule HOM05D000361 ORTHO05D004243 4.8e-69 265.0 227 65.2
MSTRG.21685 Avicennia marina HOM05D000361 ORTHO05D004243 6.2e-69 264.6 226 65.0
Rhsim01G0290600 Rhododendron simsii HOM05D000361 ORTHO05D004243 6.2e-69 264.6 226 66.4
Gohir.D12G128800 Gossypium hirsutum HOM05D000361 ORTHO05D004243 8.1e-69 264.2 224 66.1
Nitab4.5_0006144g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 8.1e-69 264.2 228 64.5
Actinidia20995 Actinidia chinensis HOM05D000361 ORTHO05D004243 1.1e-68 263.8 225 66.2
Sc05g0000420 Simmondsia chinensis HOM05D000361 ORTHO05D004243 1.1e-68 263.8 226 65.5
Carub.0006s3520 Capsella rubella HOM05D000361 ORTHO05D004243 1.4e-68 263.5 224 67.0
Psat3g020160 Pisum sativum HOM05D000361 ORTHO05D004243 1.8e-68 263.1 226 63.3
Sopen06g004290 Solanum pennellii HOM05D000361 ORTHO05D004243 1.8e-68 263.1 226 64.6
THA.LOC104799236 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 1.8e-68 263.1 224 65.6
BcaC04g24028 Brassica carinata HOM05D000361 ORTHO05D004243 2.4e-68 262.7 224 67.0
TWI36G0074 Tripterygium wilfordii HOM05D000361 ORTHO05D004243 2.4e-68 262.7 228 66.2
GSVIVG01028119001 Vitis vinifera HOM05D000361 ORTHO05D004243 2.4e-68 262.7 223 65.5
Cc01_g21390 Coffea canephora HOM05D000361 ORTHO05D004243 3.1e-68 262.3 227 64.3
Nitab4.5_0000363g0270 Nicotiana tabacum HOM05D000361 ORTHO05D004243 3.1e-68 262.3 228 64.5
BcaB01g02087 Brassica carinata HOM05D000361 ORTHO05D004243 5.3e-68 261.5 224 66.5
ECA236G0422 Erigeron canadensis HOM05D000361 ORTHO05D005006 5.3e-68 261.5 226 64.6
Aqoxy3G02976 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 6.9e-68 261.2 227 64.8
Peaxi162Scf00058g02630 Petunia axillaris HOM05D000361 ORTHO05D004243 9.0e-68 260.8 210 68.1
Potri.014G120900 Populus trichocarpa HOM05D000361 ORTHO05D004243 9.0e-68 260.8 224 65.2
Lsat_1_v5_gn_1_35460 Lactuca sativa HOM05D000361 ORTHO05D004243 1.5e-67 260.0 226 64.6
Solyc01g079490.2 Solanum lycopersicum HOM05D000361 ORTHO05D004243 1.5e-67 260.0 226 64.6
Sopen01g031260 Solanum pennellii HOM05D000361 ORTHO05D004243 1.5e-67 260.0 226 64.6
PSO017G2448 Papaver somniferum HOM05D000361 ORTHO05D004243 2.0e-67 259.6 232 62.5
Zm00001eb215280 Zea mays HOM05D000361 ORTHO05D004243 3.4e-67 258.8 221 64.7
Solyc06g009650.3 Solanum lycopersicum HOM05D000361 ORTHO05D004243 4.5e-67 258.5 226 63.3
A09p01480 Brassica napus HOM05D000361 ORTHO05D004243 5.8e-67 258.1 225 66.7
C09p01600 Brassica napus HOM05D000361 ORTHO05D004243 5.8e-67 258.1 225 66.7
BraA09t35809Z Brassica rapa HOM05D000361 ORTHO05D004243 5.8e-67 258.1 225 66.7
Gorai.007G122900 Gossypium raimondii HOM05D000361 ORTHO05D004243 5.8e-67 258.1 224 66.1
HanXRQChr15g0464131 Helianthus annuus HOM05D000361 ORTHO05D004243 7.6e-67 257.7 227 63.0
PSO063G6259 Papaver somniferum HOM05D000361 ORTHO05D004243 7.6e-67 257.7 231 62.8
CAN.G1280.26 Capsicum annuum HOM05D000361 ORTHO05D004243 1.3e-66 256.9 226 63.3
Sabra14G0089600 Salix brachista HOM05D000361 ORTHO05D005006 1.3e-66 256.9 237 62.4
Migut.N00925 Erythranthe guttata HOM05D000361 ORTHO05D004243 1.7e-66 256.5 236 61.0
Gohir.A11G109900 Gossypium hirsutum HOM05D000361 ORTHO05D004243 2.2e-66 256.1 224 65.6
Dinv10097 Davidia involucrata HOM05D000361 ORTHO05D004243 8.4e-66 254.2 226 64.2
ATR0796G177 Amborella trichopoda HOM05D000361 ORTHO05D004243 3.2e-65 252.3 224 64.3
Ciclev10018936m.g Citrus clementina HOM05D000361 ORTHO05D004243 5.5e-65 251.5 224 63.8
Os03g0737800 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D004243 1.2e-64 250.4 204 67.6
Aqoxy3G01218 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 1.6e-64 250.0 225 61.8
EL10As5g23529 Beta vulgaris HOM05D000361 ORTHO05D004243 2.1e-64 249.6 226 63.3
FAN04G1824 Fragaria x ananassa HOM05D000361 ORTHO05D004243 3.5e-64 248.8 203 67.5
Nitab4.5_0001301g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 1.3e-63 246.9 197 67.0
Atru.chr5.1002 Acer truncatum HOM05D000361 ORTHO05D004243 1.8e-63 246.5 170 77.1
BolC9t53093H Brassica oleracea HOM05D000361 ORTHO05D004243 3.0e-63 245.7 247 61.1
DCAR_012354 Daucus carota HOM05D000361 ORTHO05D004243 3.9e-63 245.4 230 60.0
Oeu008471.2 Olea europaea HOM05D000361 ORTHO05D004243 6.7e-63 244.6 265 55.1
TPR.G4118 Trifolium pratense HOM05D000361 ORTHO05D004243 6.7e-63 244.6 224 61.2
SGA_v2.0_scaffold36G14324 Striga asiatica HOM05D000361 ORTHO05D004243 8.7e-63 244.2 258 56.2
Dinv33114 Davidia involucrata HOM05D000361 ORTHO05D004243 1.1e-62 243.8 207 66.2
CDE11G0331 Ceratophyllum demersum HOM05D000361 ORTHO05D004243 1.9e-62 243.0 226 59.3
Sabra02G0160700 Salix brachista HOM05D000361 ORTHO05D004243 5.7e-62 241.5 206 63.6
HPP92_004593 Vanilla planifolia HOM05D000361 ORTHO05D004243 5.7e-62 241.5 226 61.5
SalBow2G3626 Salvia bowleyana HOM05D000361 ORTHO05D004243 1.3e-61 240.4 197 65.5
CAN.G777.12 Capsicum annuum HOM05D000361 ORTHO05D004243 2.8e-61 239.2 241 58.5
ClCG07G000710 Citrullus lanatus HOM05D000361 ORTHO05D004243 8.5e-58 227.6 227 59.5
Lj1g0012423 Lotus japonicus HOM05D000361 ORTHO05D004243 1.9e-57 226.5 198 64.1
Hund09630 Selenicereus undatus HOM05D000361 ORTHO05D004243 2.1e-56 223.0 226 58.4
Aqoxy328s001 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 6.1e-56 221.5 188 63.8
SEGI_20894 Sequoiadendron giganteum HOM05D000361 ORTHO05D004243 1.0e-55 220.7 224 55.4
arahy.Tifrunner.gnm1.ann1.1JN5P4 Arachis hypogaea HOM05D000361 ORTHO05D004243 3.0e-55 219.2 141 80.9
unitig_736.g22937 Utricularia gibba HOM05D000361 ORTHO05D004243 2.5e-49 199.5 229 51.5
SMO195G0031 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 5.5e-49 198.4 224 47.8
SMO116G0335 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 4.6e-48 195.3 213 48.4
Oeu049914.1 Olea europaea HOM05D000361 ORTHO05D004243 7.9e-48 194.5 232 50.9
Pp3c12_23510 Physcomitrium patens HOM05D000361 ORTHO05D004243 6.7e-47 191.4 227 48.5
Mapoly0167s0022 Marchantia polymorpha HOM05D000361 ORTHO05D004243 2.2e-45 186.4 224 46.9
DCAR_005759 Daucus carota HOM05D000361 ORTHO05D004243 1.3e-42 177.2 210 50.0
CBR_g48220 Chara braunii HOM05D000361 ORTHO05D004243 2.7e-40 169.5 202 45.5
Pp3c3_36800 Physcomitrium patens HOM05D000361 ORTHO05D004243 7.4e-38 161.4 205 44.9
Manes.05G003200 Manihot esculenta HOM05D000361 ORTHO05D004243 2.4e-36 156.4 140 62.9
Lalb_Chr15g0078151 Lupinus albus HOM05D000361 ORTHO05D004243 3.6e-32 142.5 106 70.8
arahy.Tifrunner.gnm1.ann1.3YE891 Arachis hypogaea HOM05D000361 ORTHO05D004243 2.2e-29 133.3 74 87.8
PRCOL_00004542 Prasinoderma coloniale HOM05D000361 ORTHO05D004243 3.1e-28 129.4 193 38.3
Ca_09209_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 5.3e-28 128.6 246 37.4
MD11G1314200 Malus domestica HOM05D000361 ORTHO05D004243 1.1e-25 120.9 110 62.7
MCO10G287 Micromonas commoda HOM05D000361 ORTHO05D004243 1.1e-25 120.9 174 39.1
Cre09.g404650 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D004243 2.7e-24 116.3 172 37.8
Lj2A1205T44 Lonicera japonica HOM05D000361 ORTHO05D004243 3.0e-23 112.8 110 58.2
Gorai.008G140000 Gossypium raimondii HOM05D000361 ORTHO05D004243 1.1e-20 104.4 85 61.2
Oeu049910.1 Olea europaea HOM05D000361 ORTHO05D004243 1.0e-18 97.8 112 50.9
Lj2A1205T45 Lonicera japonica HOM05D000361 ORTHO05D004243 1.8e-15 87.0 49 87.8
CAN.G1393.2 Capsicum annuum HOM05D005033 ORTHO05D005387 5.2e-15 85.5 72 63.9
arahy.Tifrunner.gnm1.ann1.F7DSY0 Arachis hypogaea HOM05D000361 ORTHO05D004243 2.6e-14 83.2 62 74.2
arahy.Tifrunner.gnm1.ann1.DXQ6L2 Arachis hypogaea HOM05D001795 ORTHO05D001741 1.3e-13 80.9 53 81.1
arahy.Tifrunner.gnm1.ann1.WB4NLC Arachis hypogaea HOM05D001795 ORTHO05D001741 2.2e-13 80.1 43 95.3
Lalb_Chr15g0078161 Lupinus albus HOM05D000361 ORTHO05D004243 1.4e-12 77.4 85 51.8
Glyma.14G155300 Glycine max HOM05D000361 ORTHO05D004243 1.7e-10 70.5 86 48.8
arahy.Tifrunner.gnm1.ann1.FUJ1Q4 Arachis hypogaea HOM05D001795 ORTHO05D006205 6.6e-10 68.6 35 94.3
Migut.H00631 Erythranthe guttata HOM05D000361 ORTHO05D004243 3.3e-09 66.2 71 50.7
Medtr1g087050 Medicago truncatula HOM05D000361 ORTHO05D004243 1.2e-08 64.3 35 88.6
Pp3c11_13110 Physcomitrium patens HOM05D003652 ORTHO05D004190 5.7e-06 55.5 145 26.2
AagrBONN_evm.TU.Sc2ySwM_228.3730 Anthoceros agrestis HOM05D000361 ORTHO05D004243 9.8e-06 54.7 85 32.9


User provided reference genes

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