Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 5.5e-78 294.3 154 100.0
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 1.8e-76 289.3 154 98.7
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 7.1e-41 171.0 153 66.0
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 5.1e-39 164.9 151 64.9
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 1.9e-38 162.9 154 65.6
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 2.1e-37 159.5 152 62.5
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 2.8e-37 159.1 153 64.1
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 4.7e-37 158.3 157 61.1
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 6.2e-37 157.9 156 64.7
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 8.9e-36 154.1 154 62.3
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 2.6e-35 152.5 154 61.7
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.7e-34 149.8 151 62.3
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 6.4e-34 147.9 173 57.2
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 2.4e-33 146.0 122 68.0
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 2.4e-33 146.0 122 68.0
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 5.4e-33 144.8 101 79.2
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 6.0e-32 141.4 122 66.4
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 1.0e-31 140.6 130 65.4
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 2.3e-31 139.4 99 77.8
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 3.0e-31 139.0 160 55.0
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 5.1e-31 138.3 162 54.9
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 8.6e-31 137.5 99 74.7
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 1.1e-30 137.1 100 77.0
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 1.1e-30 137.1 179 52.5
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.5e-30 136.7 169 54.4
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.5e-30 136.7 184 52.2
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 2.5e-30 136.0 160 54.4
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 2.5e-30 136.0 100 76.0
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 2.5e-30 136.0 169 54.4
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 4.3e-30 135.2 133 61.7
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 4.3e-30 135.2 168 52.4
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 4.3e-30 135.2 111 68.5
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 4.3e-30 135.2 97 74.2
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 5.6e-30 134.8 106 71.7
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 5.6e-30 134.8 133 61.7
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 5.6e-30 134.8 133 61.7
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 5.6e-30 134.8 184 50.5
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 5.6e-30 134.8 92 78.3
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 5.6e-30 134.8 169 52.7
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 9.6e-30 134.0 132 62.1
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 9.6e-30 134.0 152 56.6
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 1.2e-29 133.7 170 54.1
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.6e-29 133.3 86 82.6
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 1.6e-29 133.3 97 75.3
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 1.6e-29 133.3 149 59.7
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 1.6e-29 133.3 147 57.1
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 1.6e-29 133.3 103 72.8
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 2.1e-29 132.9 134 59.7
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 2.1e-29 132.9 154 55.2
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 2.1e-29 132.9 141 58.9
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 2.1e-29 132.9 103 73.8
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 4.7e-29 131.7 183 49.2
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 6.2e-29 131.3 145 57.9
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 6.2e-29 131.3 164 53.0
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 6.2e-29 131.3 90 77.8
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 8.1e-29 131.0 97 73.2
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 1.1e-28 130.6 162 52.5
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 1.4e-28 130.2 163 54.6
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 1.4e-28 130.2 130 63.1
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 1.8e-28 129.8 100 71.0
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 1.8e-28 129.8 99 70.7
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.4e-28 129.4 86 80.2
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.4e-28 129.4 86 80.2
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 2.4e-28 129.4 101 72.3
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 3.1e-28 129.0 125 60.0
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 4.0e-28 128.6 96 75.0
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 4.0e-28 128.6 169 52.7
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 4.0e-28 128.6 92 77.2
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 4.0e-28 128.6 92 77.2
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 5.2e-28 128.3 94 75.5
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 8.9e-28 127.5 141 56.7
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 8.9e-28 127.5 86 82.6
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 8.9e-28 127.5 164 51.8
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 1.2e-27 127.1 102 70.6
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 1.2e-27 127.1 127 59.8
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 1.5e-27 126.7 89 75.3
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 2.0e-27 126.3 164 51.8
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 2.0e-27 126.3 154 50.0
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 2.0e-27 126.3 140 57.1
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 4.4e-27 125.2 99 71.7
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 4.4e-27 125.2 90 73.3
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 5.8e-27 124.8 93 69.9
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 5.8e-27 124.8 87 74.7
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 7.6e-27 124.4 157 54.1
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 7.6e-27 124.4 157 54.1
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 7.6e-27 124.4 120 60.0
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 7.6e-27 124.4 120 60.0
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 9.9e-27 124.0 100 70.0
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.3e-26 123.6 89 75.3
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.3e-26 123.6 89 75.3
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.3e-26 123.6 89 75.3
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 1.7e-26 123.2 81 80.2
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 1.7e-26 123.2 84 76.2
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 3.8e-26 122.1 102 66.7
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 8.4e-26 120.9 161 50.9
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 8.4e-26 120.9 161 50.9
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 8.4e-26 120.9 146 52.7
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 1.4e-25 120.2 101 63.4
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 1.9e-25 119.8 96 69.8
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 2.4e-25 119.4 161 50.3
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 3.2e-25 119.0 161 50.9
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 3.2e-25 119.0 155 51.0
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 2.1e-24 116.3 102 64.7
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 2.7e-24 115.9 96 65.6
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.7e-23 113.2 84 70.2
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 7.3e-22 107.8 81 70.4
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 9.6e-22 107.5 96 62.5
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 9.6e-22 107.5 83 69.9
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 2.8e-21 105.9 83 69.9
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 3.6e-21 105.5 91 63.7
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 1.5e-19 100.1 64 82.8
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 4.6e-16 88.6 82 58.5
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.9e-15 85.5 87 57.5
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 5.1e-15 85.1 87 57.5
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 8.7e-15 84.3 81 55.6
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 1.4e-12 77.0 84 53.6
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 4.5e-11 72.0 58 65.5


User provided reference genes

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