Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 2.4e-58 228.8 128 100.0
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 3.9e-53 211.5 128 95.3
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 6.7e-29 131.0 99 64.6
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 6.7e-29 131.0 99 64.6
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 8.2e-27 124.0 99 62.6
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 1.4e-26 123.2 96 63.5
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 1.8e-26 122.9 112 58.0
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 5.3e-26 121.3 103 58.3
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 1.2e-25 120.2 103 57.3
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 1.5e-25 119.8 91 60.4
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 3.5e-25 118.6 102 56.9
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 4.5e-25 118.2 107 59.8
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 5.9e-25 117.9 78 69.2
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 5.9e-25 117.9 86 61.6
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 7.7e-25 117.5 99 53.5
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 7.7e-25 117.5 104 57.7
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 1.7e-24 116.3 102 55.9
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 2.2e-24 115.9 104 54.8
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 2.9e-24 115.5 99 54.5
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 3.8e-24 115.2 108 54.6
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 8.5e-24 114.0 91 62.6
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 1.1e-23 113.6 104 54.8
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 1.5e-23 113.2 99 56.6
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 2.5e-23 112.5 81 61.7
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 2.5e-23 112.5 73 68.5
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 3.2e-23 112.1 99 56.6
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 4.2e-23 111.7 99 54.5
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 4.2e-23 111.7 67 71.6
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 5.5e-23 111.3 87 59.8
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 7.2e-23 110.9 73 61.6
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 7.2e-23 110.9 101 55.4
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 7.2e-23 110.9 67 70.1
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 7.2e-23 110.9 98 55.1
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 9.4e-23 110.5 84 63.1
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 9.4e-23 110.5 100 53.0
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.6e-22 109.8 108 49.1
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 2.1e-22 109.4 92 57.6
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 2.7e-22 109.0 98 52.0
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 4.7e-22 108.2 102 50.0
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 6.1e-22 107.8 103 52.4
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 8.0e-22 107.5 98 52.0
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 8.0e-22 107.5 107 49.5
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 1.0e-21 107.1 78 60.3
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 1.0e-21 107.1 96 55.2
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 1.0e-21 107.1 95 56.8
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 1.4e-21 106.7 98 53.1
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 1.4e-21 106.7 100 52.0
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 1.8e-21 106.3 80 61.2
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 1.8e-21 106.3 65 67.7
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.8e-21 106.3 65 67.7
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 1.8e-21 106.3 55 78.2
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 1.8e-21 106.3 101 52.5
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 1.8e-21 106.3 89 56.2
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 1.8e-21 106.3 95 56.8
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 1.8e-21 106.3 95 56.8
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 2.3e-21 105.9 80 60.0
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 2.3e-21 105.9 101 51.5
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 2.3e-21 105.9 59 72.9
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 2.3e-21 105.9 89 57.3
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 4.0e-21 105.1 92 57.6
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 4.0e-21 105.1 105 49.5
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 4.0e-21 105.1 97 51.5
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 5.2e-21 104.8 89 56.2
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 5.2e-21 104.8 67 65.7
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 6.7e-21 104.4 97 53.6
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 6.7e-21 104.4 102 55.9
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 6.7e-21 104.4 71 64.8
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 6.7e-21 104.4 63 65.1
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 6.7e-21 104.4 63 65.1
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 8.8e-21 104.0 75 62.7
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 1.5e-20 103.2 89 55.1
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 1.5e-20 103.2 103 51.5
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 2.0e-20 102.8 94 54.3
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 2.0e-20 102.8 99 52.5
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 2.6e-20 102.4 100 50.0
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 2.6e-20 102.4 90 54.4
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 3.3e-20 102.1 94 58.5
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 3.3e-20 102.1 97 54.6
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 3.3e-20 102.1 93 53.8
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 4.4e-20 101.7 86 57.0
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 5.7e-20 101.3 95 51.6
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 5.7e-20 101.3 90 54.4
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 7.4e-20 100.9 82 56.1
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 7.4e-20 100.9 94 54.3
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 9.7e-20 100.5 63 66.7
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 1.3e-19 100.1 97 50.5
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 2.2e-19 99.4 99 48.5
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 2.8e-19 99.0 97 55.7
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 2.8e-19 99.0 89 53.9
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.8e-19 99.0 64 65.6
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 2.8e-19 99.0 97 55.7
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 4.8e-19 98.2 96 47.9
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 1.1e-18 97.1 89 51.7
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 2.4e-18 95.9 62 62.9
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 3.5e-17 92.0 55 65.5
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 5.9e-17 91.3 91 48.4
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 2.2e-16 89.4 103 43.7
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.9e-16 89.0 74 56.8
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 1.9e-15 86.3 85 48.2
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 7.2e-15 84.3 53 66.0
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 1.5e-12 76.6 79 48.1
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 4.4e-12 75.1 70 52.9
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 3.7e-11 72.0 57 56.1


User provided reference genes

Program Settings