Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.96AXQD Arachis hypogaea HOM05D004224 ORTHO05D006437 6.8e-78 293.9 145 100.0
arahy.Tifrunner.gnm1.ann1.V7950Q Arachis hypogaea HOM05D004224 ORTHO05D006437 1.6e-58 229.6 170 72.9
Ca_16340_v3 Cicer arietinum L. HOM05D004224 ORTHO05D006437 1.1e-46 190.3 153 65.4
CiPaw.03G282900 Carya illinoinensis HOM05D004224 ORTHO05D006437 1.4e-46 189.9 153 65.4
Dinv21312 Davidia involucrata HOM05D004224 ORTHO05D006437 1.8e-46 189.5 153 65.4
QL04p067662 Quercus lobata HOM05D004224 ORTHO05D006437 1.8e-46 189.5 153 66.0
Glyma.13G010500 Glycine max HOM05D004224 ORTHO05D006437 2.4e-46 189.1 173 62.4
Cfa014211 Carpinus fangiana HOM05D004224 ORTHO05D006437 5.2e-46 188.0 153 65.4
Haze_12602 Corylus avellana HOM05D004224 ORTHO05D006437 5.2e-46 188.0 153 64.7
Haze_12613 Corylus avellana HOM05D004224 ORTHO05D006437 5.2e-46 188.0 153 64.7
PSO675G8516 Papaver somniferum HOM05D004224 ORTHO05D006437 9.0e-46 187.2 153 65.4
Phvul.006G005700 Phaseolus vulgaris HOM05D004224 ORTHO05D006437 9.0e-46 187.2 144 68.1
Medtr3g082690 Medicago truncatula HOM05D004224 ORTHO05D006437 1.5e-45 186.4 153 65.4
TAR629G0565 Trochodendron aralioides HOM05D004224 ORTHO05D006437 1.5e-45 186.4 153 64.7
Actinidia09800 Actinidia chinensis HOM05D004224 ORTHO05D006437 2.0e-45 186.0 153 64.1
TPR.G16163 Trifolium pratense HOM05D004224 ORTHO05D006437 3.4e-45 185.3 153 64.1
vmacro12069 Vaccinium macrocarpon HOM05D004224 ORTHO05D006437 3.4e-45 185.3 153 62.7
CSS0035947 Camellia sinensis var. sinensis HOM05D004224 ORTHO05D006437 4.4e-45 184.9 153 64.1
Gohir.D07G171000 Gossypium hirsutum HOM05D004224 ORTHO05D006437 5.8e-45 184.5 153 64.1
Gorai.001G190900 Gossypium raimondii HOM05D004224 ORTHO05D006437 5.8e-45 184.5 153 64.1
Lj1A799T35 Lonicera japonica HOM05D004224 ORTHO05D006437 5.8e-45 184.5 156 61.5
Hma1.2p1_0629F.1_g192230 Hydrangea macrophylla HOM05D004224 ORTHO05D006437 7.6e-45 184.1 153 65.4
Nn1g07539 Nelumbo nucifera HOM05D004224 ORTHO05D006437 7.6e-45 184.1 153 65.4
Potri.014G169300 Populus trichocarpa HOM05D004224 ORTHO05D006437 7.6e-45 184.1 144 65.3
DCAR_019670 Daucus carota HOM05D004224 ORTHO05D006437 9.9e-45 183.7 153 64.7
Lsat_1_v5_gn_7_97380 Lactuca sativa HOM05D004224 ORTHO05D006437 1.3e-44 183.3 153 62.1
Migut.M00055 Erythranthe guttata HOM05D004224 ORTHO05D006437 1.7e-44 183.0 144 63.2
PSO541G4615 Papaver somniferum HOM05D004224 ORTHO05D006437 1.7e-44 183.0 153 64.7
Sabra14G0129100 Salix brachista HOM05D004224 ORTHO05D006437 1.7e-44 183.0 153 62.7
Sed0013057 Sechium edule HOM05D004224 ORTHO05D006437 1.7e-44 183.0 144 65.3
GSVIVG01030117001 Vitis vinifera HOM05D004224 ORTHO05D006437 1.7e-44 183.0 144 66.0
Nitab4.5_0006992g0010 Nicotiana tabacum HOM05D004224 ORTHO05D006437 2.2e-44 182.6 153 62.7
Lj6g0004652 Lotus japonicus HOM05D004224 ORTHO05D006437 2.9e-44 182.2 153 65.4
Oeu040454.1 Olea europaea HOM05D004224 ORTHO05D006437 2.9e-44 182.2 153 62.7
Peaxi162Scf00612g00137 Petunia axillaris HOM05D004224 ORTHO05D006437 2.9e-44 182.2 144 63.9
CsaV3_7G002430 Cucumis sativus L. HOM05D004224 ORTHO05D006437 3.8e-44 181.8 144 63.9
SGA_v2.0_scaffold73G24493 Striga asiatica HOM05D004224 ORTHO05D006437 3.8e-44 181.8 144 63.2
Thecc.01G198200 Theobroma cacao HOM05D004224 ORTHO05D006437 3.8e-44 181.8 153 64.1
ClCG02G002970 Citrullus lanatus HOM05D004224 ORTHO05D006437 4.9e-44 181.4 148 62.8
Nitab4.5_0004852g0010 Nicotiana tabacum HOM05D004224 ORTHO05D006437 4.9e-44 181.4 153 62.7
Aqoxy7G02030 Aquilegia oxysepala HOM05D004224 ORTHO05D006437 6.4e-44 181.0 144 66.7
MSTRG.14913 Avicennia marina HOM05D004224 ORTHO05D006437 8.4e-44 180.6 144 63.9
Cpa.g.sc136.38 Carica papaya HOM05D004224 ORTHO05D006437 8.4e-44 180.6 153 62.7
Ciclev10014974m.g Citrus clementina HOM05D004224 ORTHO05D006437 8.4e-44 180.6 153 63.4
Gohir.A07G163700 Gossypium hirsutum HOM05D004224 ORTHO05D006437 8.4e-44 180.6 153 62.7
Manes.13G060800 Manihot esculenta HOM05D004224 ORTHO05D006437 1.1e-43 180.3 144 63.9
Psat5g104720 Pisum sativum HOM05D004224 ORTHO05D006437 1.1e-43 180.3 153 63.4
BcaB04g21275 Brassica carinata HOM05D004224 ORTHO05D006437 1.4e-43 179.9 144 63.2
HanXRQChr11g0329421 Helianthus annuus HOM05D004224 ORTHO05D006437 1.4e-43 179.9 153 60.8
PGR031G1258 Punica granatum HOM05D004224 ORTHO05D006437 1.4e-43 179.9 153 63.4
MELO3C024188.2 Cucumis melo HOM05D004224 ORTHO05D006437 1.9e-43 179.5 144 63.2
MBI15_g41427_MAGBIO Magnolia biondii HOM05D004224 ORTHO05D006437 1.9e-43 179.5 153 63.4
MBI15_g45882_MAGBIO Magnolia biondii HOM05D004224 ORTHO05D006437 1.9e-43 179.5 153 63.4
CANSAT64G1501 Cannabis sativa HOM05D004224 ORTHO05D006437 3.2e-43 178.7 153 61.4
MD17G1118300 Malus domestica HOM05D004224 ORTHO05D006437 3.2e-43 178.7 164 60.4
Carub.0003s0725 Capsella rubella HOM05D004224 ORTHO05D006437 4.2e-43 178.3 144 62.5
RcHm_v2.0_Chr2g0155741 Rosa chinensis HOM05D004224 ORTHO05D006437 4.2e-43 178.3 144 62.5
AT3G07670 Arabidopsis thaliana HOM05D004224 ORTHO05D006437 5.4e-43 177.9 144 62.5
FvH4_6g40490 Fragaria vesca HOM05D004224 ORTHO05D006437 5.4e-43 177.9 144 63.9
FAN09G3658 Fragaria x ananassa HOM05D004224 ORTHO05D006437 5.4e-43 177.9 144 63.9
Aa31LG5G18250 Aethionema arabicum HOM05D004224 ORTHO05D006437 7.1e-43 177.6 144 62.5
BolC1t05538H Brassica oleracea HOM05D004224 ORTHO05D006437 7.1e-43 177.6 144 62.5
BraA01t04368Z Brassica rapa HOM05D004224 ORTHO05D006437 7.1e-43 177.6 144 62.5
AUR62029126 Chenopodium quinoa HOM05D004224 ORTHO05D006437 7.1e-43 177.6 143 62.2
FAN05G1563 Fragaria x ananassa HOM05D004224 ORTHO05D006437 7.1e-43 177.6 144 63.9
AL3G19030 Arabidopsis lyrata HOM05D004224 ORTHO05D006437 9.3e-43 177.2 144 62.5
ECA236G4771 Erigeron canadensis HOM05D004224 ORTHO05D006437 9.3e-43 177.2 153 60.1
Sc21g0000480 Simmondsia chinensis HOM05D004224 ORTHO05D006437 9.3e-43 177.2 164 58.5
FAN10G1506 Fragaria x ananassa HOM05D004224 ORTHO05D006437 1.2e-42 176.8 146 62.3
FAN14G2615 Fragaria x ananassa HOM05D004224 ORTHO05D006437 1.2e-42 176.8 146 62.3
THA.LOC104802631 Tarenaya hassleriana HOM05D004224 ORTHO05D006437 1.2e-42 176.8 144 63.2
Solyc07g045310.4 Solanum lycopersicum HOM05D004224 ORTHO05D006437 1.6e-42 176.4 153 60.1
Sopen07g023840 Solanum pennellii HOM05D004224 ORTHO05D006437 1.6e-42 176.4 153 60.1
CAN.G437.10 Capsicum annuum HOM05D004224 ORTHO05D006437 2.1e-42 176.0 153 60.1
PGSC0003DMG400017407 Solanum tuberosum HOM05D004224 ORTHO05D006437 2.1e-42 176.0 153 60.1
AUR62014995 Chenopodium quinoa HOM05D004224 ORTHO05D006437 2.7e-42 175.6 143 61.5
TWI75G0912 Tripterygium wilfordii HOM05D004224 ORTHO05D006437 7.8e-42 174.1 153 60.8
CDE05G3447 Ceratophyllum demersum HOM05D004224 ORTHO05D006437 1.0e-41 173.7 173 55.5
Thhalv10020552m.g Eutrema salsugineum HOM05D004224 ORTHO05D006437 1.3e-41 173.3 144 61.8
Sp3g06610 Schrenkiella parvula HOM05D004224 ORTHO05D006437 1.3e-41 173.3 144 61.8
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 3.9e-41 171.8 144 59.0
ATR0751G026 Amborella trichopoda HOM05D004224 ORTHO05D006437 8.7e-41 170.6 153 60.1
Eucgr.A01370 Eucalyptus grandis HOM05D004224 ORTHO05D006437 1.9e-40 169.5 178 53.4
arahy.Tifrunner.gnm1.ann1.GG41TB Arachis hypogaea HOM05D004224 ORTHO05D006437 5.6e-40 167.9 121 74.4
Gohir.A08G049300 Gossypium hirsutum HOM05D004224 ORTHO05D006437 9.6e-40 167.2 153 58.2
arahy.Tifrunner.gnm1.ann1.CZ6VEU Arachis hypogaea HOM05D004224 ORTHO05D006437 1.3e-39 166.8 119 72.3
arahy.Tifrunner.gnm1.ann1.ZYNV17 Arachis hypogaea HOM05D004224 ORTHO05D006437 1.3e-39 166.8 119 72.3
Os02g0725200 Oryza sativa ssp. japonica HOM05D004224 ORTHO05D006437 2.1e-39 166.0 153 58.8
Gorai.004G061300 Gossypium raimondii HOM05D004224 ORTHO05D006437 1.4e-38 163.3 153 58.2
arahy.Tifrunner.gnm1.ann1.BMUC0J Arachis hypogaea HOM05D004224 ORTHO05D006437 3.1e-38 162.2 84 94.0
Zm00001eb189210 Zea mays HOM05D004224 ORTHO05D006437 3.1e-38 162.2 153 56.2
arahy.Tifrunner.gnm1.ann1.1Z88ZW Arachis hypogaea HOM05D004224 ORTHO05D006437 9.0e-38 160.6 84 91.7
Hund08285 Selenicereus undatus HOM05D004224 ORTHO05D006437 9.0e-38 160.6 144 54.9
HPP92_018978 Vanilla planifolia HOM05D004224 ORTHO05D006437 2.0e-37 159.5 163 54.0
EL10Ac9g22662 Beta vulgaris HOM05D004224 ORTHO05D006437 2.4e-35 152.5 144 54.9
Rhsim06G0178000 Rhododendron simsii HOM05D004224 ORTHO05D006437 2.3e-33 146.0 127 62.2
Lalb_Chr04g0259121 Lupinus albus HOM05D004224 ORTHO05D006437 2.5e-32 142.5 127 64.6
Gohir.D08G059301 Gossypium hirsutum HOM05D004224 ORTHO05D006437 3.1e-30 135.6 125 56.0
AUR62035877 Chenopodium quinoa HOM05D004224 ORTHO05D006437 3.4e-29 132.1 116 57.8
arahy.Tifrunner.gnm1.ann1.DS9TRP Arachis hypogaea HOM05D004224 ORTHO05D006437 7.1e-27 124.4 60 95.0
arahy.Tifrunner.gnm1.ann1.M7VRPU Arachis hypogaea HOM05D004224 ORTHO05D006437 1.6e-26 123.2 61 93.4
arahy.Tifrunner.gnm1.ann1.NI6VNY Arachis hypogaea HOM05D004224 ORTHO05D006437 1.6e-26 123.2 61 93.4
SEGI_13327 Sequoiadendron giganteum HOM05D004224 ORTHO05D006437 1.6e-26 123.2 138 48.6
MD09G1129500 Malus domestica HOM05D004224 ORTHO05D006437 1.0e-25 120.6 163 47.2
Thecc.01G197400 Theobroma cacao HOM05D004224 ORTHO05D006437 5.1e-25 118.2 117 57.3
arahy.Tifrunner.gnm1.ann1.39WU8S Arachis hypogaea HOM05D004224 ORTHO05D006437 1.6e-23 113.2 62 90.3
arahy.Tifrunner.gnm1.ann1.DWYC5U Arachis hypogaea HOM05D004224 ORTHO05D006437 6.2e-23 111.3 62 90.3
Prupe.3G196100 Prunus persica HOM05D004224 ORTHO05D006437 7.6e-21 104.4 82 67.1
COL.COLO4_19641 Corchorus olitorius HOM05D004224 ORTHO05D006437 1.7e-20 103.2 60 76.7
arahy.Tifrunner.gnm1.ann1.5JAS6J Arachis hypogaea HOM05D004224 ORTHO05D006437 3.8e-20 102.1 56 91.1
arahy.Tifrunner.gnm1.ann1.YYI95N Arachis hypogaea HOM05D015477 ORTHO05D006437 8.4e-20 100.9 55 90.9
Thecc.01G197800 Theobroma cacao HOM05D003366 ORTHO05D006437 1.1e-19 100.5 71 74.6
SMO358G0584 Selaginella moellendorffii HOM05D004224 ORTHO05D006437 6.0e-18 94.7 127 40.9
Pp3c4_19510 Physcomitrium patens HOM05D004224 ORTHO05D006437 5.7e-16 88.2 134 41.0
AagrBONN_evm.TU.Sc2ySwM_228.1763 Anthoceros agrestis HOM05D004224 ORTHO05D006437 1.8e-14 83.2 154 35.7
arahy.Tifrunner.gnm1.ann1.W9BT88 Arachis hypogaea HOM05D004224 ORTHO05D006437 4.2e-11 72.0 49 73.5
MCO04G522 Micromonas commoda HOM05D004224 ORTHO05D006437 1.0e-09 67.4 104 32.7
Cre12.g503800 Chlamydomonas reinhardtii HOM05D004224 ORTHO05D006437 2.2e-07 59.7 47 57.4
arahy.Tifrunner.gnm1.ann1.09D7IH Arachis hypogaea HOM05D004224 ORTHO05D011012 4.8e-07 58.5 27 96.3
arahy.Tifrunner.gnm1.ann1.D5L463 Arachis hypogaea HOM05D004224 ORTHO05D086544 1.8e-06 56.6 28 92.9
Pp3c22_6390 Physcomitrium patens HOM05D004224 ORTHO05D006437 5.3e-06 55.1 103 31.1


User provided reference genes

Program Settings