Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 7.4e-264 913.3 453 100.0
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 1.7e-236 822.4 431 95.4
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 1.4e-190 669.8 364 93.1
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 2.9e-127 459.5 443 58.2
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 6.5e-127 458.4 449 57.7
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 1.7e-122 443.7 407 60.4
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 1.0e-119 434.5 445 55.7
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 1.0e-108 397.9 448 53.8
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 1.6e-104 384.0 477 49.7
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 1.5e-99 367.5 446 50.2
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 2.5e-62 243.8 344 46.8
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 9.6e-54 215.3 456 36.6
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 1.2e-51 208.4 454 37.9
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 5.8e-51 206.1 453 36.9
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 7.6e-51 205.7 236 50.4
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 7.6e-51 205.7 521 34.5
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 4.6e-48 196.4 257 43.6
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 6.0e-48 196.1 435 33.8
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.0e-47 195.3 257 43.6
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 8.7e-47 192.2 547 32.4
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 1.1e-46 191.8 481 33.3
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 1.9e-46 191.0 318 42.5
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 2.5e-46 190.7 460 35.4
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 4.3e-46 189.9 408 36.8
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 8.1e-45 185.7 266 43.2
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 5.3e-44 183.0 462 34.8
Glyma.20G061700 Glycine max HOM05D007164 ORTHO05D008802 6.9e-44 182.6 278 47.5
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 1.5e-43 181.4 475 35.2
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 3.4e-43 180.3 501 30.7
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 7.6e-43 179.1 230 45.7
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 1.4e-41 174.9 425 33.9
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 1.4e-41 174.9 416 34.1
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 5.5e-41 172.9 270 40.7
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 1.2e-40 171.8 437 33.2
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 1.2e-40 171.8 332 34.0
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 1.6e-40 171.4 243 43.2
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 2.1e-40 171.0 439 32.6
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 2.3e-39 167.5 425 34.1
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 3.9e-39 166.8 412 33.0
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 1.9e-38 164.5 411 32.6
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 2.5e-38 164.1 252 41.3
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 3.3e-38 163.7 425 32.9
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 1.3e-37 161.8 434 33.9
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 1.8e-36 157.9 428 29.7
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 4.0e-36 156.8 253 38.3
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 5.3e-36 156.4 342 33.9
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 6.9e-36 156.0 376 33.2
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 9.0e-36 155.6 458 30.3
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 4.9e-34 149.8 220 41.4
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 1.9e-33 147.9 343 31.8
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 7.1e-33 146.0 449 31.6
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 7.9e-32 142.5 343 31.5
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 2.3e-31 141.0 343 31.2
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 2.3e-31 141.0 186 44.1
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 6.7e-31 139.4 194 43.3
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 1.1e-30 138.7 258 35.3
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 1.1e-30 138.7 421 31.1
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 5.7e-30 136.3 328 32.3
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 7.4e-30 136.0 350 32.6
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 7.4e-30 136.0 220 39.1
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 1.3e-29 135.2 344 30.8
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 1.6e-29 134.8 378 30.7
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 2.2e-29 134.4 329 32.8
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 4.8e-29 133.3 163 41.7
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 1.1e-28 132.1 177 44.6
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 1.1e-28 132.1 230 40.9
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 1.8e-28 131.3 349 30.7
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 6.9e-28 129.4 411 29.9
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 2.6e-27 127.5 208 38.9
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 7.7e-27 125.9 474 30.6
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 2.5e-25 120.9 171 42.1
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 3.2e-25 120.6 265 32.8
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 5.5e-25 119.8 197 37.6
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 1.2e-24 118.6 215 36.3
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 1.6e-24 118.2 315 31.1
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 3.6e-24 117.1 299 34.4
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 1.0e-23 115.5 210 36.2
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 1.0e-23 115.5 163 39.9
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 1.4e-23 115.2 143 44.1
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 5.1e-23 113.2 166 43.4
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 2.5e-22 110.9 178 42.1
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 9.7e-22 109.0 430 28.6
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 1.7e-21 108.2 164 39.6
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 2.2e-21 107.8 242 33.1
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 2.8e-21 107.5 168 37.5
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 2.4e-20 104.4 205 36.6
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 4.5e-19 100.1 95 54.7
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 1.9e-17 94.7 282 32.3
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 2.1e-16 91.3 252 32.5
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 8.8e-15 85.9 107 39.3
AagrBONN_evm.TU.Sc2ySwM_117.3923 Anthoceros agrestis HOM05D007164 ORTHO05D008802 6.3e-13 79.7 217 29.0
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 1.8e-12 78.2 261 32.2
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 3.1e-12 77.4 144 35.4
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 4.1e-12 77.0 182 32.4
Pp3c3_15490 Physcomitrium patens HOM05D007164 ORTHO05D008802 1.5e-11 75.1 170 26.5
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 2.6e-11 74.3 183 31.1
EL10Ac7g17490 Beta vulgaris HOM05D007164 ORTHO05D008802 1.3e-10 72.0 325 25.5
Mapoly0046s0035 Marchantia polymorpha HOM05D007164 ORTHO05D008802 1.7e-10 71.6 215 26.0
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 2.9e-10 70.9 198 30.3
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 4.2e-09 67.0 192 30.2
BcaB06g26239 Brassica carinata HOM05D007164 ORTHO05D008802 8.0e-08 62.8 107 37.4
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 4.4e-06 57.0 316 26.3


User provided reference genes

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