Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 3.5e-157 558.1 266 100.0
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 9.8e-115 417.2 280 73.6
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 1.1e-113 413.7 279 72.0
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 7.0e-113 411.0 281 72.6
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 7.0e-113 411.0 282 71.3
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 1.5e-110 403.3 277 71.1
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 1.9e-110 402.9 285 70.2
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 1.0e-108 397.1 273 72.5
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 2.3e-108 396.0 280 72.1
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 3.1e-105 385.6 276 68.1
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 2.0e-104 382.9 283 67.5
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 2.3e-103 379.4 283 65.0
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 8.6e-103 377.5 287 65.2
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 1.1e-102 377.1 274 68.6
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 1.6e-101 373.2 282 66.0
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 1.4e-100 370.2 255 66.7
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 2.3e-100 369.4 285 64.9
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 3.0e-100 369.0 269 66.5
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 1.2e-99 367.1 274 67.2
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 1.2e-99 367.1 256 70.3
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 1.2e-99 367.1 280 63.9
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 1.5e-99 366.7 264 65.5
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 3.4e-99 365.5 249 69.9
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 4.4e-99 365.2 255 65.5
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 5.7e-99 364.8 283 63.3
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 9.8e-99 364.0 282 64.2
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 9.8e-99 364.0 276 64.9
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 1.3e-98 363.6 283 63.3
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.3e-98 363.6 289 63.3
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 1.3e-98 363.6 285 63.5
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 1.7e-98 363.2 255 67.1
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 2.2e-98 362.8 280 64.6
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 2.9e-98 362.5 306 60.5
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 3.7e-98 362.1 256 68.4
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 4.9e-98 361.7 284 64.1
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 4.9e-98 361.7 271 65.7
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 4.9e-98 361.7 282 63.5
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 1.8e-97 359.8 281 63.0
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 1.8e-97 359.8 283 62.9
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 5.4e-97 358.2 287 61.3
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 5.4e-97 358.2 279 62.7
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 5.4e-97 358.2 274 63.5
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 9.2e-97 357.5 284 62.0
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 2.7e-96 355.9 279 61.6
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 3.5e-96 355.5 277 62.5
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 4.6e-96 355.1 237 67.1
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 7.8e-96 354.4 278 63.7
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 1.0e-95 354.0 277 62.1
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 1.0e-95 354.0 277 62.1
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 1.3e-95 353.6 277 62.1
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 3.0e-95 352.4 277 62.1
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 5.0e-95 351.7 285 61.4
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 5.0e-95 351.7 278 62.9
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 5.0e-95 351.7 257 65.4
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 6.6e-95 351.3 278 61.5
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 8.6e-95 350.9 283 62.2
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 1.1e-94 350.5 277 62.1
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.1e-94 350.5 279 62.0
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 1.1e-94 350.5 242 67.8
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 1.5e-94 350.1 237 68.4
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 1.9e-94 349.7 284 62.3
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 2.5e-94 349.4 279 59.9
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 3.3e-94 349.0 232 69.8
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 4.3e-94 348.6 279 59.5
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 5.6e-94 348.2 230 71.3
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 5.6e-94 348.2 245 66.9
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 5.6e-94 348.2 280 61.8
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 7.3e-94 347.8 278 61.2
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 7.3e-94 347.8 239 68.2
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 7.3e-94 347.8 281 61.9
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 9.5e-94 347.4 287 62.7
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 1.2e-93 347.1 280 61.1
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 1.6e-93 346.7 281 59.8
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 2.1e-93 346.3 244 68.0
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 2.8e-93 345.9 278 60.8
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 8.0e-93 344.4 278 60.1
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 1.1e-92 344.0 283 59.0
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 1.4e-92 343.6 278 60.8
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 1.4e-92 343.6 280 61.4
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 1.8e-92 343.2 247 64.4
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 2.3e-92 342.8 272 62.5
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 2.3e-92 342.8 290 59.7
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 4.0e-92 342.0 289 63.0
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 1.2e-91 340.5 300 56.0
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 4.4e-91 338.6 236 65.7
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 1.9e-89 333.2 258 61.2
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 3.2e-89 332.4 257 63.0
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 4.1e-89 332.0 266 69.9
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 4.1e-89 332.0 276 62.3
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 9.2e-89 330.9 289 58.1
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 1.2e-88 330.5 252 62.3
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 6.0e-88 328.2 271 59.0
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 1.7e-87 326.6 293 57.7
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 3.0e-87 325.9 277 57.4
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 5.6e-86 321.6 205 70.7
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 2.1e-85 319.7 263 62.0
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 3.6e-85 318.9 269 57.6
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 6.2e-85 318.2 197 74.6
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 2.6e-83 312.8 279 54.5
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 2.2e-82 309.7 205 67.3
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 2.9e-82 309.3 263 58.2
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 5.8e-75 285.0 221 60.2
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 2.4e-73 279.6 203 62.1
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 1.2e-72 277.3 231 57.1
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 7.8e-72 274.6 261 56.3
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 4.4e-67 258.8 196 65.8
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 9.9e-67 257.7 196 64.8
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 1.3e-66 257.3 193 65.8
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 1.9e-65 253.4 209 53.1
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.0e-63 246.1 224 50.0
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 3.0e-63 246.1 173 69.9
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 5.1e-63 245.4 208 51.4
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 5.6e-62 241.9 248 46.8
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 7.3e-62 241.5 225 50.7
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 6.9e-60 235.0 204 52.5
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 1.6e-53 213.8 144 68.1
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 6.4e-50 201.8 238 42.0
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 2.4e-49 199.9 241 48.1
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 1.0e-47 194.5 159 54.1
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 3.0e-47 193.0 164 56.7
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 1.1e-41 174.5 152 59.9
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 1.3e-26 124.4 143 46.2
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 4.2e-25 119.4 70 74.3
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 1.5e-19 100.9 125 52.0
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 7.2e-09 65.5 62 54.8


User provided reference genes

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