Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.92IF5I Arachis hypogaea HOM05D012508 ORTHO05D011743 4.5e-61 237.7 112 100.0
arahy.Tifrunner.gnm1.ann1.HN7ZH9 Arachis hypogaea HOM05D012508 ORTHO05D011743 7.9e-58 226.9 112 97.3
arahy.Tifrunner.gnm1.ann1.TXQ6WE Arachis hypogaea HOM05D012508 ORTHO05D011743 7.9e-58 226.9 112 97.3
arahy.Tifrunner.gnm1.ann1.BEZ08J Arachis hypogaea HOM05D012508 ORTHO05D011743 5.1e-57 224.2 112 96.4
arahy.Tifrunner.gnm1.ann1.18Y7ZR Arachis hypogaea HOM05D012508 ORTHO05D011743 1.1e-56 223.0 112 96.4
CsaV3_6G024130 Cucumis sativus L. HOM05D012508 ORTHO05D011743 1.1e-38 163.3 81 92.6
Psat0s3560g0080 Pisum sativum HOM05D000533 ORTHO05D002807 3.6e-34 148.3 85 81.2
CDE02G2006 Ceratophyllum demersum HOM05D012508 ORTHO05D011743 2.1e-26 122.5 61 91.8
Dinv06689 Davidia involucrata HOM05D015183 ORTHO05D011743 1.8e-25 119.4 57 94.7
Lj2C1229T26 Lonicera japonica HOM05D012508 ORTHO05D011743 1.8e-25 119.4 57 94.7
Ca_17160_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 3.9e-25 118.2 55 96.4
BolSC28t60326H Brassica oleracea HOM05D007924 ORTHO05D011743 1.1e-24 116.7 57 93.0
BraSC54t46355Z Brassica rapa HOM05D015026 ORTHO05D011743 1.1e-24 116.7 57 93.0
Actinidia34823 Actinidia chinensis HOM05D012508 ORTHO05D011743 5.7e-24 114.4 59 91.5
Sopen10g026770 Solanum pennellii HOM05D000533 ORTHO05D001069 4.8e-23 111.3 60 90.0
Nitab4.5_0001919g0060 Nicotiana tabacum HOM05D012508 ORTHO05D011743 1.3e-20 103.2 59 83.1
Nitab4.5_0007578g0070 Nicotiana tabacum HOM05D012508 ORTHO05D011743 2.1e-18 95.9 61 78.7
Sopen12g017210 Solanum pennellii HOM05D000533 ORTHO05D001069 1.8e-17 92.8 59 81.4
BraSC159t45717Z Brassica rapa HOM05D007924 ORTHO05D010328 8.8e-17 90.5 47 89.4
Cfa023039 Carpinus fangiana HOM05D008731 ORTHO05D013062 4.4e-16 88.2 47 89.4
Sopen05g012860 Solanum pennellii HOM05D000533 ORTHO05D001069 1.1e-14 83.6 47 87.2
Sopen01g027220 Solanum pennellii HOM05D012508 ORTHO05D011743 4.2e-11 71.6 43 81.4
Phvul.011G124215 Phaseolus vulgaris HOM05D000533 ORTHO05D011488 8.8e-09 63.9 135 37.0
arahy.Tifrunner.gnm1.ann1.04CCAU Arachis hypogaea HOM05D021481 ORTHO05D021486 2.2e-07 59.3 28 100.0
arahy.Tifrunner.gnm1.ann1.20VADI Arachis hypogaea HOM05D000533 ORTHO05D011488 2.2e-07 59.3 28 100.0
arahy.Tifrunner.gnm1.ann1.2U5581 Arachis hypogaea HOM05D000533 ORTHO05D011488 2.2e-07 59.3 28 100.0
arahy.Tifrunner.gnm1.ann1.EH7RRY Arachis hypogaea HOM05D000533 ORTHO05D011488 2.2e-07 59.3 28 100.0
Lalb_Chr01g0010861 Lupinus albus HOM05D000533 ORTHO05D011488 4.8e-07 58.2 32 87.5
ATR0693G242 Amborella trichopoda HOM05D008843 ORTHO05D011743 4.1e-06 55.1 37 70.3
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 9.1e-06 53.9 27 96.3


User provided reference genes

Program Settings