Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.92987I Arachis hypogaea HOM05D002427 ORTHO05D087754 2.0e-69 265.8 147 100.0
arahy.Tifrunner.gnm1.ann1.7V0FWY Arachis hypogaea HOM05D002427 ORTHO05D023732 8.9e-09 64.3 30 100.0
arahy.Tifrunner.gnm1.ann1.GBNN5P Arachis hypogaea HOM05D002427 ORTHO05D023732 8.9e-09 64.3 30 100.0
arahy.Tifrunner.gnm1.ann1.A2RU10 Arachis hypogaea HOM05D002427 ORTHO05D002818 3.4e-08 62.4 31 93.5
arahy.Tifrunner.gnm1.ann1.GNX9M7 Arachis hypogaea HOM05D002427 ORTHO05D002818 3.4e-08 62.4 31 93.5
CSS0011297 Camellia sinensis var. sinensis HOM05D002427 ORTHO05D023732 2.2e-07 59.7 31 87.1
Peaxi162Scf01286g00123 Petunia axillaris HOM05D002427 ORTHO05D002818 2.9e-07 59.3 47 63.8
Lalb_Chr08g0237811 Lupinus albus HOM05D002427 ORTHO05D002818 6.4e-07 58.2 47 61.7
Solyc04g015450.3 Solanum lycopersicum HOM05D002427 ORTHO05D002818 8.3e-07 57.8 47 61.7
Sopen04g007500 Solanum pennellii HOM05D002427 ORTHO05D002818 8.3e-07 57.8 47 61.7
PGSC0003DMG400027268 Solanum tuberosum HOM05D002427 ORTHO05D002818 8.3e-07 57.8 47 61.7
Sc09g0004380 Simmondsia chinensis HOM05D002427 ORTHO05D002818 1.1e-06 57.4 47 59.6
Manes.13G078601 Manihot esculenta HOM05D002427 ORTHO05D002818 1.4e-06 57.0 31 83.9
DCAR_012727 Daucus carota HOM05D002427 ORTHO05D002818 1.9e-06 56.6 47 59.6
QL10p040252 Quercus lobata HOM05D002427 ORTHO05D002818 1.9e-06 56.6 31 80.6
QL10p040373 Quercus lobata HOM05D002427 ORTHO05D002818 1.9e-06 56.6 31 80.6
Actinidia16534 Actinidia chinensis HOM05D002427 ORTHO05D002818 2.4e-06 56.2 47 59.6
Dinv05907 Davidia involucrata HOM05D002427 ORTHO05D002818 2.4e-06 56.2 47 57.4
Lj1g0013321 Lotus japonicus HOM05D002427 ORTHO05D002818 2.4e-06 56.2 31 80.6
Mapoly0067s0096 Marchantia polymorpha HOM05D002427 ORTHO05D002818 2.4e-06 56.2 47 57.4
Ah.06g191700 Amaranthus hybridus HOM05D002427 ORTHO05D002818 3.2e-06 55.8 47 55.3
CAN.G676.46 Capsicum annuum HOM05D002427 ORTHO05D002818 3.2e-06 55.8 47 59.6
Ciclev10025061m.g Citrus clementina HOM05D002427 ORTHO05D002818 3.2e-06 55.8 31 80.6
ECA248G0559 Erigeron canadensis HOM05D002427 ORTHO05D002818 3.2e-06 55.8 47 55.3
HanXRQChr11g0343541 Helianthus annuus HOM05D002427 ORTHO05D002818 3.2e-06 55.8 47 55.3
Nitab4.5_0000147g0070 Nicotiana tabacum HOM05D002427 ORTHO05D002818 3.2e-06 55.8 47 59.6
Nitab4.5_0001663g0160 Nicotiana tabacum HOM05D002427 ORTHO05D002818 3.2e-06 55.8 47 59.6
EL10Ac4g08949 Beta vulgaris HOM05D002427 ORTHO05D002818 4.1e-06 55.5 45 60.0
Cpa.g.sc37.74 Carica papaya HOM05D002427 ORTHO05D002818 4.1e-06 55.5 31 77.4
CBR_g41196 Chara braunii HOM05D002427 ORTHO05D002818 4.1e-06 55.5 47 55.3
AUR62004792 Chenopodium quinoa HOM05D002427 ORTHO05D002818 4.1e-06 55.5 31 77.4
AUR62039045 Chenopodium quinoa HOM05D002427 ORTHO05D002818 4.1e-06 55.5 31 77.4
Lsat_1_v5_gn_1_80721 Lactuca sativa HOM05D002427 ORTHO05D002818 4.1e-06 55.5 47 55.3
MBI03_g11148_MAGBIO Magnolia biondii HOM05D002427 ORTHO05D002818 4.1e-06 55.5 47 59.6
MBI03_g40054_MAGBIO Magnolia biondii HOM05D002427 ORTHO05D002818 4.1e-06 55.5 47 59.6
BcaB01g05651 Brassica carinata HOM05D005219 ORTHO05D006451 5.4e-06 55.1 31 80.6
C03p04490 Brassica napus HOM05D005219 ORTHO05D006451 5.4e-06 55.1 76 46.1
BolC3t12980H Brassica oleracea HOM05D002427 ORTHO05D002818 5.4e-06 55.1 76 46.1
Lj4A817G44 Lonicera japonica HOM05D002427 ORTHO05D002818 5.4e-06 55.1 47 57.4
RcHm_v2.0_Chr2g0098891 Rosa chinensis HOM05D002427 ORTHO05D002818 5.4e-06 55.1 47 57.4
TWI31G0626 Tripterygium wilfordii HOM05D002427 ORTHO05D002818 5.4e-06 55.1 31 77.4
Cfa002224 Carpinus fangiana HOM05D002427 ORTHO05D002818 7.0e-06 54.7 31 77.4
Eucgr.L00739 Eucalyptus grandis HOM05D002427 ORTHO05D002818 7.0e-06 54.7 47 57.4
Rhsim08G0000900 Rhododendron simsii HOM05D002427 ORTHO05D002818 7.0e-06 54.7 31 77.4
AL6G19380 Arabidopsis lyrata HOM05D002427 ORTHO05D002818 9.2e-06 54.3 47 57.4
AT5G08650 Arabidopsis thaliana HOM05D002427 ORTHO05D002818 9.2e-06 54.3 47 57.4
Carub.0006s0764 Capsella rubella HOM05D002427 ORTHO05D002818 9.2e-06 54.3 47 57.4
CiPaw.03G254700 Carya illinoinensis HOM05D002427 ORTHO05D002818 9.2e-06 54.3 47 55.3
Cc07_g20240 Coffea canephora HOM05D002427 ORTHO05D002818 9.2e-06 54.3 45 60.0
Nn1g08924 Nelumbo nucifera HOM05D002427 ORTHO05D002818 9.2e-06 54.3 47 57.4
PSO017G6250 Papaver somniferum HOM05D002427 ORTHO05D002818 9.2e-06 54.3 47 55.3
PSO170G1031 Papaver somniferum HOM05D002427 ORTHO05D002818 9.2e-06 54.3 47 55.3
SEGI_07522 Sequoiadendron giganteum HOM05D002427 ORTHO05D002818 9.2e-06 54.3 46 56.5
unitig_37.g12358 Utricularia gibba HOM05D002427 ORTHO05D002818 9.2e-06 54.3 47 55.3


User provided reference genes

Program Settings