Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 6.1e-112 407.5 211 100.0
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 8.6e-98 360.5 223 86.5
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 7.3e-97 357.5 211 89.6
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 2.1e-96 355.9 211 89.1
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 1.6e-80 303.1 211 76.8
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 2.1e-80 302.8 211 77.3
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 2.8e-80 302.4 211 77.7
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 5.2e-79 298.1 211 75.8
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 3.4e-78 295.4 211 76.8
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 1.7e-77 293.1 211 77.3
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 3.2e-76 288.9 212 74.1
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 1.9e-73 279.6 211 73.9
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 2.2e-69 266.2 211 70.1
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 1.0e-66 257.3 212 69.8
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 1.1e-65 253.8 212 68.9
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 9.0e-63 244.2 208 66.3
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 3.4e-62 242.3 212 66.5
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 1.1e-60 237.3 214 65.0
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 2.1e-59 233.0 190 64.7
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.3e-58 230.3 213 62.9
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 3.0e-58 229.2 179 69.3
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 1.1e-57 227.3 145 80.0
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.5e-57 226.9 213 62.4
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 5.6e-57 224.9 212 61.8
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 1.3e-56 223.8 184 65.8
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 1.3e-56 223.8 185 67.6
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 1.3e-56 223.8 190 64.7
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 2.1e-56 223.0 188 67.6
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 6.2e-56 221.5 182 67.0
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 1.8e-55 219.9 213 62.0
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 3.1e-55 219.2 211 59.7
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 6.9e-55 218.0 217 60.4
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 9.0e-55 217.6 168 71.4
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 9.0e-55 217.6 215 57.7
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 1.2e-54 217.2 238 53.8
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 2.6e-54 216.1 212 59.9
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 1.0e-53 214.2 213 58.2
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 1.3e-53 213.8 211 57.8
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 1.7e-53 213.4 212 59.4
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 2.2e-53 213.0 182 65.4
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 2.2e-53 213.0 211 59.2
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 2.2e-53 213.0 184 64.7
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 2.2e-53 213.0 173 68.8
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 3.8e-53 212.2 184 65.2
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 4.9e-53 211.8 213 58.7
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 6.5e-53 211.5 185 63.2
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 1.1e-52 210.7 168 69.6
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 3.2e-52 209.1 209 58.9
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 3.2e-52 209.1 172 64.0
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 5.5e-52 208.4 211 58.8
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 7.1e-52 208.0 212 59.0
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.6e-51 206.8 180 65.0
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 1.6e-51 206.8 186 64.0
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 3.5e-51 205.7 197 60.9
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 3.5e-51 205.7 184 64.1
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 1.0e-50 204.1 184 62.0
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 2.3e-50 203.0 170 65.9
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 6.7e-50 201.4 170 64.7
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 6.7e-50 201.4 173 65.3
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 6.7e-50 201.4 209 57.9
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 1.5e-49 200.3 211 56.9
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 1.5e-49 200.3 173 64.7
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 2.5e-49 199.5 168 64.3
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 3.3e-49 199.1 190 60.0
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 5.7e-49 198.4 173 64.7
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 5.7e-49 198.4 178 62.9
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 7.4e-49 198.0 178 62.4
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 2.8e-48 196.1 187 59.9
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 3.7e-48 195.7 216 56.0
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 4.8e-48 195.3 178 63.5
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.8e-48 195.3 178 63.5
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 4.8e-48 195.3 157 66.2
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 6.2e-48 194.9 178 62.9
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 6.2e-48 194.9 184 60.3
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 1.4e-47 193.7 178 61.8
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 1.5e-46 190.3 170 61.8
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 7.6e-46 188.0 141 68.1
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 7.6e-46 188.0 197 57.4
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 1.3e-45 187.2 135 70.4
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 2.2e-45 186.4 176 60.2
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 2.9e-45 186.0 140 68.6
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 5.0e-45 185.3 137 69.3
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 8.4e-45 184.5 153 67.3
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 1.1e-44 184.1 196 55.1
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 1.4e-44 183.7 179 60.9
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 1.9e-44 183.3 140 68.6
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 7.1e-44 181.4 137 67.2
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 9.3e-44 181.0 155 65.8
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 9.3e-44 181.0 129 71.3
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 1.6e-43 180.3 129 71.3
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 2.1e-43 179.9 155 65.8
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 2.7e-43 179.5 129 73.6
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 6.1e-43 178.3 136 66.9
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 7.9e-43 177.9 129 70.5
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 3.9e-42 175.6 212 50.9
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 1.5e-41 173.7 135 68.1
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 1.6e-40 170.2 189 53.4
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 2.8e-40 169.5 208 50.5
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 3.1e-39 166.0 122 68.9
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 5.7e-33 145.2 101 75.2
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 2.2e-32 143.3 136 52.9
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.1e-31 141.0 137 59.1
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 4.2e-28 129.0 175 45.7
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 4.2e-28 129.0 135 49.6
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 7.9e-27 124.8 123 48.8
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 3.7e-24 115.9 139 46.0
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 2.0e-22 110.2 116 54.3
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 1.8e-18 97.1 70 72.9
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 3.1e-15 86.3 168 33.3


User provided reference genes

Program Settings