Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8XA8G4 Arachis hypogaea HOM05D010482 ORTHO05D000385 9.8e-122 440.3 241 100.0
arahy.Tifrunner.gnm1.ann1.5MEJ54 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.5e-101 373.2 221 90.0
arahy.Tifrunner.gnm1.ann1.CXU7YK Arachis hypogaea HOM05D010482 ORTHO05D000385 3.3e-101 372.1 238 85.3
arahy.Tifrunner.gnm1.ann1.465ER6 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.8e-99 366.3 219 90.0
arahy.Tifrunner.gnm1.ann1.LQJ2G8 Arachis hypogaea HOM05D010482 ORTHO05D000385 3.4e-98 362.1 219 88.6
arahy.Tifrunner.gnm1.ann1.U7U33W Arachis hypogaea HOM05D010482 ORTHO05D000385 7.3e-85 317.8 219 81.7
arahy.Tifrunner.gnm1.ann1.SC3PTI Arachis hypogaea HOM05D010482 ORTHO05D000385 3.0e-78 295.8 230 76.1
arahy.Tifrunner.gnm1.ann1.HKAM97 Arachis hypogaea HOM05D010482 ORTHO05D000385 9.6e-77 290.8 230 74.3
arahy.Tifrunner.gnm1.ann1.PL7LDA Arachis hypogaea HOM05D010482 ORTHO05D000385 1.9e-72 276.6 219 74.0
arahy.Tifrunner.gnm1.ann1.B5ZI8V Arachis hypogaea HOM05D010482 ORTHO05D000385 1.1e-67 260.8 170 83.5
arahy.Tifrunner.gnm1.ann1.B5I3IH Arachis hypogaea HOM05D010482 ORTHO05D000385 6.2e-60 235.0 219 63.9
arahy.Tifrunner.gnm1.ann1.76LV04 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.0e-46 191.0 113 85.0
arahy.Tifrunner.gnm1.ann1.U4Z5MQ Arachis hypogaea HOM05D010482 ORTHO05D000385 2.9e-41 172.9 107 88.8
arahy.Tifrunner.gnm1.ann1.TBML09 Arachis hypogaea HOM05D010482 ORTHO05D000385 4.8e-36 155.6 88 86.4
Medtr3g037670 Medicago truncatula HOM05D029643 ORTHO05D020514 2.8e-20 103.2 156 39.7
arahy.Tifrunner.gnm1.ann1.P9GJ6G Arachis hypogaea HOM05D010482 ORTHO05D000385 2.6e-18 96.7 93 55.9
arahy.Tifrunner.gnm1.ann1.7PGW8X Arachis hypogaea HOM05D010482 ORTHO05D000385 1.5e-16 90.9 89 65.2
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 5.3e-11 72.4 133 31.6
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.0e-11 72.0 114 36.0
MBI17_g21607_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.5e-10 69.3 121 36.4
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.0e-09 68.2 113 35.4
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 2.2e-09 67.0 111 36.0
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 3.8e-09 66.2 98 35.7
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.8e-09 66.2 106 33.0
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 5.0e-09 65.9 114 35.1
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.0e-09 65.9 100 38.0
TAR365G0205 Trochodendron aralioides HOM05D000141 ORTHO05D000385 5.0e-09 65.9 100 38.0
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.0e-09 65.9 100 38.0
TAR375G0312 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.5e-09 65.5 100 38.0
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-08 64.7 133 27.8
TAR078G0002 Trochodendron aralioides HOM05D001440 ORTHO05D000385 1.1e-08 64.7 100 39.0
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.1e-08 64.7 99 38.4
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 1.1e-08 64.7 100 37.0
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 1.5e-08 64.3 113 34.5
TAR383G0561 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.5e-08 64.3 99 38.4
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.9e-08 63.9 100 38.0
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.5e-08 63.5 99 38.4
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 9.4e-08 61.6 103 36.9
COL.COLO4_15674 Corchorus olitorius HOM05D027546 ORTHO05D020514 1.6e-07 60.8 141 29.8
MBI02_g35833_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-07 60.8 187 26.2
MBI05_g40696_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D000385 2.1e-07 60.5 105 35.2
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 2.7e-07 60.1 113 31.9
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 3.6e-07 59.7 76 42.1
MBI10_g17725_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-06 57.8 77 36.4
TAR628G0437 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.4e-06 57.8 77 37.7
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.8e-06 57.4 87 35.6
TAR371G1187 Trochodendron aralioides HOM05D001982 ORTHO05D003938 1.8e-06 57.4 83 34.9
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 2.3e-06 57.0 113 31.9
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 4.0e-06 56.2 117 31.6
Cpa.g.sc113.47 Carica papaya HOM05D005763 ORTHO05D005970 5.2e-06 55.8 178 24.2
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 5.2e-06 55.8 139 26.6
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 5.2e-06 55.8 139 26.6
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 6.8e-06 55.5 113 29.2
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.8e-06 55.5 80 33.8
MBI15_g14066_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.8e-06 55.1 118 30.5
MBI19_g00150_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.8e-06 55.1 77 36.4


User provided reference genes

Program Settings