Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8V97K8 Arachis hypogaea HOM05D004600 ORTHO05D005471 1.1e-54 216.5 114 100.0
arahy.Tifrunner.gnm1.ann1.FL4BP3 Arachis hypogaea HOM05D004600 ORTHO05D005471 5.4e-54 214.2 114 99.1
Lalb_Chr10g0107261 Lupinus albus HOM05D004600 ORTHO05D005471 1.7e-47 192.6 114 86.8
Gohir.D11G317800 Gossypium hirsutum HOM05D004600 ORTHO05D005471 2.9e-47 191.8 114 86.8
Gorai.007G347600 Gossypium raimondii HOM05D004600 ORTHO05D005471 2.9e-47 191.8 114 86.8
Thecc.05G234100 Theobroma cacao HOM05D004600 ORTHO05D005471 6.4e-47 190.7 114 86.8
CSS0000756 Camellia sinensis var. sinensis HOM05D004600 ORTHO05D005471 1.1e-46 189.9 114 86.8
Duzib177G1065 Durio zibethinus HOM05D004600 ORTHO05D005471 2.4e-46 188.7 114 86.8
Ca_06414_v3 Cicer arietinum L. HOM05D004600 ORTHO05D005471 5.4e-46 187.6 115 88.7
DCAR_002257 Daucus carota HOM05D004600 ORTHO05D005471 9.2e-46 186.8 112 84.8
Gohir.A11G302200 Gossypium hirsutum HOM05D004600 ORTHO05D005471 9.2e-46 186.8 114 85.1
Cfa003694 Carpinus fangiana HOM05D004600 ORTHO05D005471 1.2e-45 186.4 114 84.2
Hma1.2p1_2581F.1_g324750 Hydrangea macrophylla HOM05D004600 ORTHO05D005471 1.2e-45 186.4 112 87.5
THA.LOC104805733 Tarenaya hassleriana HOM05D004600 ORTHO05D005471 1.2e-45 186.4 114 84.2
TPR.G31719 Trifolium pratense HOM05D004600 ORTHO05D005471 2.0e-45 185.7 115 87.8
GSVIVG01018312001 Vitis vinifera HOM05D004600 ORTHO05D005471 2.0e-45 185.7 114 84.2
CSS0047927 Camellia sinensis var. sinensis HOM05D004600 ORTHO05D005471 2.7e-45 185.3 114 84.2
QL02p099100 Quercus lobata HOM05D004600 ORTHO05D005471 3.5e-45 184.9 113 85.0
Carub.0004s1157 Capsella rubella HOM05D004600 ORTHO05D005471 4.6e-45 184.5 114 83.3
THA.LOC104821611 Tarenaya hassleriana HOM05D004600 ORTHO05D005471 4.6e-45 184.5 114 83.3
Glyma.12G219600 Glycine max HOM05D004600 ORTHO05D005471 6.0e-45 184.1 110 88.2
AT2G30410 Arabidopsis thaliana HOM05D004600 ORTHO05D005471 1.0e-44 183.3 114 82.5
ECA234G0066 Erigeron canadensis HOM05D004600 ORTHO05D005471 1.7e-44 182.6 114 80.7
Manes.08G156800 Manihot esculenta HOM05D004600 ORTHO05D005471 1.7e-44 182.6 114 82.5
Sed0013640 Sechium edule HOM05D004600 ORTHO05D005471 1.7e-44 182.6 112 82.1
ClCG06G000640 Citrullus lanatus HOM05D004600 ORTHO05D005471 2.3e-44 182.2 112 81.2
Actinidia30941 Actinidia chinensis HOM05D004600 ORTHO05D005471 3.0e-44 181.8 112 85.7
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 3.0e-44 181.8 110 85.5
Phvul.008G274500 Phaseolus vulgaris HOM05D004600 ORTHO05D005471 3.0e-44 181.8 114 84.2
EL10Ac2g03665 Beta vulgaris HOM05D004600 ORTHO05D005471 3.9e-44 181.4 114 83.3
Sed0004677 Sechium edule HOM05D004600 ORTHO05D005471 8.6e-44 180.3 112 81.2
TWI34G1465 Tripterygium wilfordii HOM05D004600 ORTHO05D005471 8.6e-44 180.3 112 83.9
CiPaw.11G057300 Carya illinoinensis HOM05D004600 ORTHO05D005471 1.5e-43 179.5 114 81.6
FvH4_7g07840 Fragaria vesca HOM05D004600 ORTHO05D005471 1.9e-43 179.1 115 82.6
FvH4_7g08250 Fragaria vesca HOM05D004600 ORTHO05D005471 1.9e-43 179.1 115 82.6
FAN01G2185 Fragaria x ananassa HOM05D004600 ORTHO05D005471 1.9e-43 179.1 115 82.6
FAN06G4779 Fragaria x ananassa HOM05D004600 ORTHO05D005471 1.9e-43 179.1 115 82.6
SalBow5G2739 Salvia bowleyana HOM05D004600 ORTHO05D005471 1.9e-43 179.1 114 81.6
SalBow5G4978 Salvia bowleyana HOM05D004600 ORTHO05D005471 1.9e-43 179.1 114 81.6
VMungo0647G0484 Vigna mungo HOM05D004600 ORTHO05D005471 1.9e-43 179.1 114 82.5
Cpa.g.sc73.56 Carica papaya HOM05D004600 ORTHO05D005471 2.5e-43 178.7 114 82.5
Eucgr.E01748 Eucalyptus grandis HOM05D004600 ORTHO05D005471 2.5e-43 178.7 114 80.7
Thhalv10017954m.g Eutrema salsugineum HOM05D004600 ORTHO05D005471 2.5e-43 178.7 114 80.7
Manes.09G132900 Manihot esculenta HOM05D004600 ORTHO05D005471 2.5e-43 178.7 112 81.2
Rhsim07G0038000 Rhododendron simsii HOM05D004600 ORTHO05D005471 2.5e-43 178.7 114 83.3
TWI32G0106 Tripterygium wilfordii HOM05D004600 ORTHO05D005471 2.5e-43 178.7 112 82.1
Glyma.13G281700 Glycine max HOM05D004600 ORTHO05D005471 3.3e-43 178.3 112 84.8
Prupe.2G105900 Prunus persica HOM05D004600 ORTHO05D005471 3.3e-43 178.3 115 82.6
CARHR123850 Cardamine hirsuta HOM05D004600 ORTHO05D005471 4.3e-43 177.9 112 81.2
HanXRQChr06g0175191 Helianthus annuus HOM05D004600 ORTHO05D005471 4.3e-43 177.9 114 78.1
Sopen01g030360 Solanum pennellii HOM05D004600 ORTHO05D005471 4.3e-43 177.9 114 79.8
Actinidia05778 Actinidia chinensis HOM05D000441 ORTHO05D005471 5.6e-43 177.6 104 90.4
Solyc01g068400.3 Solanum lycopersicum HOM05D004600 ORTHO05D005471 5.6e-43 177.6 114 79.8
MD07G1080900 Malus domestica HOM05D004600 ORTHO05D005471 7.3e-43 177.2 115 82.6
Oeu011239.1 Olea europaea HOM05D004600 ORTHO05D005471 7.3e-43 177.2 114 80.7
SpUn0968_0010 Schrenkiella parvula HOM05D004600 ORTHO05D005471 7.3e-43 177.2 115 80.9
HanXRQChr17g0540501 Helianthus annuus HOM05D004600 ORTHO05D005471 9.5e-43 176.8 114 78.1
Ciclev10033122m.g Citrus clementina HOM05D004600 ORTHO05D005471 1.2e-42 176.4 114 82.5
Migut.N01726 Erythranthe guttata HOM05D004600 ORTHO05D005471 1.2e-42 176.4 114 80.7
MD02G1232800 Malus domestica HOM05D004600 ORTHO05D005471 1.2e-42 176.4 115 80.9
PGSC0003DMG400017954 Solanum tuberosum HOM05D004600 ORTHO05D005471 1.2e-42 176.4 114 78.9
AUR62010214 Chenopodium quinoa HOM05D004600 ORTHO05D005471 2.8e-42 175.3 114 80.7
AUR62023888 Chenopodium quinoa HOM05D004600 ORTHO05D005471 2.8e-42 175.3 114 80.7
Potri.013G071100 Populus trichocarpa HOM05D004600 ORTHO05D005471 2.8e-42 175.3 113 80.5
AL136U10020 Arabidopsis lyrata HOM05D004600 ORTHO05D005471 3.6e-42 174.9 114 79.8
AL4G25280 Arabidopsis lyrata HOM05D004600 ORTHO05D005471 3.6e-42 174.9 114 79.8
MSTRG.28140 Avicennia marina HOM05D004600 ORTHO05D005471 3.6e-42 174.9 105 87.6
LjContig00272g0018481 Lotus japonicus HOM05D004600 ORTHO05D005471 3.6e-42 174.9 114 79.8
DCAR_002240 Daucus carota HOM05D000064 ORTHO05D001307 4.7e-42 174.5 106 83.0
Nitab4.5_0006200g0020 Nicotiana tabacum HOM05D004600 ORTHO05D005471 4.7e-42 174.5 114 77.2
Nn6g33746 Nelumbo nucifera HOM05D004600 ORTHO05D005471 8.1e-42 173.7 114 82.5
RcHm_v2.0_Chr1g0341631 Rosa chinensis HOM05D004600 ORTHO05D005471 8.1e-42 173.7 115 80.0
Hund03244 Selenicereus undatus HOM05D004600 ORTHO05D005471 8.1e-42 173.7 114 79.8
TAR374G1537 Trochodendron aralioides HOM05D004600 ORTHO05D005471 1.1e-41 173.3 114 81.6
MBI04_g38566_MAGBIO Magnolia biondii HOM05D004600 ORTHO05D005471 1.4e-41 172.9 114 78.9
Medtr5g094290 Medicago truncatula HOM05D004600 ORTHO05D005471 1.4e-41 172.9 115 81.7
PGR042G2124 Punica granatum HOM05D004600 ORTHO05D005471 1.4e-41 172.9 114 79.8
Sabra13G0062000 Salix brachista HOM05D004600 ORTHO05D005471 3.1e-41 171.8 113 80.5
Ciclev10017245m.g Citrus clementina HOM05D004600 ORTHO05D005471 5.2e-41 171.0 114 80.7
CAN.G179.37 Capsicum annuum HOM05D004600 ORTHO05D005471 6.8e-41 170.6 114 77.2
Lsat_1_v5_gn_3_31540 Lactuca sativa HOM05D004600 ORTHO05D005471 6.8e-41 170.6 114 76.3
MELO3C022478.2 Cucumis melo HOM05D004600 ORTHO05D005471 8.9e-41 170.2 112 76.8
PSO782G3599 Papaver somniferum HOM05D004600 ORTHO05D005471 8.9e-41 170.2 114 76.3
SalBow2G1105 Salvia bowleyana HOM05D004600 ORTHO05D005471 1.5e-40 169.5 114 77.2
Aqoxy3G02625 Aquilegia oxysepala HOM05D004600 ORTHO05D005471 2.0e-40 169.1 114 79.8
Aqoxy4G01604 Aquilegia oxysepala HOM05D004600 ORTHO05D005471 2.0e-40 169.1 114 79.8
CsaV3_6G006410 Cucumis sativus L. HOM05D004600 ORTHO05D005471 2.0e-40 169.1 112 77.7
Medtr5g094860 Medicago truncatula HOM05D004600 ORTHO05D005471 2.0e-40 169.1 115 80.0
Cc10_g08750 Coffea canephora HOM05D004600 ORTHO05D005471 2.6e-40 168.7 106 80.2
Peaxi162Scf00309g00111 Petunia axillaris HOM05D004600 ORTHO05D005471 2.6e-40 168.7 114 77.2
PSO063G0817 Papaver somniferum HOM05D004600 ORTHO05D005471 3.4e-40 168.3 114 75.4
CANSAT56G0524 Cannabis sativa HOM05D004600 ORTHO05D005471 5.8e-40 167.5 111 78.4
Carub.0004s0600 Capsella rubella HOM05D004600 ORTHO05D005471 7.5e-40 167.2 112 79.5
A05p15020 Brassica napus HOM05D004600 ORTHO05D005471 2.2e-39 165.6 114 76.3
BolC4t23549H Brassica oleracea HOM05D004600 ORTHO05D005471 2.2e-39 165.6 114 76.3
BraA05t20428Z Brassica rapa HOM05D004600 ORTHO05D005471 2.2e-39 165.6 114 76.3
BcaB02g10324 Brassica carinata HOM05D004600 ORTHO05D005471 4.9e-39 164.5 114 76.3
C04p20100 Brassica napus HOM05D004600 ORTHO05D005471 4.9e-39 164.5 114 75.4
vmacro13519 Vaccinium macrocarpon HOM05D004600 ORTHO05D005471 6.4e-39 164.1 142 66.2
BcaB01g04106 Brassica carinata HOM05D004600 ORTHO05D005471 1.1e-38 163.3 114 76.3
BcaC02g11135 Brassica carinata HOM05D004600 ORTHO05D005471 1.1e-38 163.3 114 75.4
FAN10G3323 Fragaria x ananassa HOM05D004600 ORTHO05D005471 1.4e-38 162.9 146 65.1
MBI14_g39049_MAGBIO Magnolia biondii HOM05D004600 ORTHO05D005471 1.4e-38 162.9 114 75.4
CANSAT80G0198 Cannabis sativa HOM05D004600 ORTHO05D005471 1.9e-38 162.5 111 75.7
Aa31LG2G2070 Aethionema arabicum HOM05D004600 ORTHO05D005471 4.1e-38 161.4 107 80.4
arahy.Tifrunner.gnm1.ann1.AN2C62 Arachis hypogaea HOM05D004600 ORTHO05D005471 4.1e-38 161.4 94 92.6
Nitab4.5_0002801g0010 Nicotiana tabacum HOM05D004600 ORTHO05D005471 5.4e-38 161.0 145 62.1
Peaxi162Scf00519g00014 Petunia axillaris HOM05D004600 ORTHO05D005471 5.4e-38 161.0 104 79.8
ATR0594G180 Amborella trichopoda HOM05D004600 ORTHO05D005471 2.1e-37 159.1 114 72.8
CDE02G3136 Ceratophyllum demersum HOM05D004600 ORTHO05D005471 4.3e-35 151.4 114 71.1
HPP92_003331 Vanilla planifolia HOM05D004600 ORTHO05D005471 4.7e-34 147.9 105 73.3
SEGI_02498 Sequoiadendron giganteum HOM05D004600 ORTHO05D005471 1.8e-33 146.0 114 68.4
Os02g0816500 Oryza sativa ssp. japonica HOM05D004600 ORTHO05D005471 1.5e-32 142.9 84 86.9
Atru.chr2.1648 Acer truncatum HOM05D004600 ORTHO05D005471 2.0e-32 142.5 80 90.0
COL.COLO4_33093 Corchorus olitorius HOM05D004600 ORTHO05D005471 5.8e-32 141.0 91 79.1
Haze_15791 Corylus avellana HOM05D004600 ORTHO05D005471 5.8e-32 141.0 80 90.0
Aa31LG5G6310 Aethionema arabicum HOM05D004600 ORTHO05D005471 1.3e-31 139.8 77 92.2
BcaNung06780 Brassica carinata HOM05D004600 ORTHO05D005471 1.7e-31 139.4 100 74.0
Zm00001eb258870 Zea mays HOM05D004600 ORTHO05D005471 2.9e-31 138.7 77 90.9
arahy.Tifrunner.gnm1.ann1.TEM6YH Arachis hypogaea HOM05D004600 ORTHO05D005471 8.4e-31 137.1 77 93.5
Duzib106G0868 Durio zibethinus HOM05D004600 ORTHO05D005471 1.4e-30 136.3 77 90.9
unitig_22.g5795 Utricularia gibba HOM05D004600 ORTHO05D005471 2.4e-30 135.6 111 63.1
SEGI_10368 Sequoiadendron giganteum HOM05D004600 ORTHO05D005471 5.4e-30 134.4 105 67.6
Psat2g010800 Pisum sativum HOM05D004600 ORTHO05D005471 6.0e-29 131.0 83 80.7
Psat6g223560 Pisum sativum HOM05D004600 ORTHO05D005471 6.0e-29 131.0 83 80.7
arahy.Tifrunner.gnm1.ann1.M3PSJH Arachis hypogaea HOM05D004254 ORTHO05D005184 5.6e-27 124.4 71 91.5
COL.COLO4_34174 Corchorus olitorius HOM05D004600 ORTHO05D005471 1.1e-25 120.2 72 83.3
RcHm_v2.0_Chr1g0341741 Rosa chinensis HOM05D004600 ORTHO05D005471 4.0e-25 118.2 65 90.8
RhsimUnG0214300 Rhododendron simsii HOM05D004600 ORTHO05D005471 2.6e-24 115.5 112 56.2
SMO140G0024 Selaginella moellendorffii HOM05D004600 ORTHO05D005471 1.7e-23 112.8 77 72.7
PSO017G3083 Papaver somniferum HOM05D004600 ORTHO05D005471 2.4e-22 109.0 114 56.1
Mapoly0038s0031 Marchantia polymorpha HOM05D004600 ORTHO05D005471 3.2e-22 108.6 105 53.3
BcaNung05668 Brassica carinata HOM05D004600 ORTHO05D005471 9.3e-22 107.1 77 71.4
CBR_g52286 Chara braunii HOM05D004600 ORTHO05D005471 2.7e-21 105.5 104 57.7
AagrBONN_evm.TU.Sc2ySwM_368.563 Anthoceros agrestis HOM05D001974 ORTHO05D001995 1.3e-20 103.2 102 55.9
BcaNung05666 Brassica carinata HOM05D004600 ORTHO05D005471 1.7e-20 102.8 77 68.8
COL.COLO4_33692 Corchorus olitorius HOM05D004600 ORTHO05D005471 3.3e-19 98.6 100 57.0
AUR62013210 Chenopodium quinoa HOM05D004600 ORTHO05D005471 1.3e-18 96.7 63 77.8
Pp3c8_15900 Physcomitrium patens HOM05D004600 ORTHO05D005471 2.8e-18 95.5 106 48.1
arahy.Tifrunner.gnm1.ann1.3LH6CZ Arachis hypogaea HOM05D004600 ORTHO05D021519 1.4e-17 93.2 92 59.8
Sc01g0008330 Simmondsia chinensis HOM05D004600 ORTHO05D005471 5.3e-17 91.3 60 75.0
Pp3c5_8620 Physcomitrium patens HOM05D004600 ORTHO05D005471 1.3e-15 86.7 79 54.4
FAN01G1805 Fragaria x ananassa HOM05D004600 ORTHO05D005471 1.7e-15 86.3 57 78.9
SGA_v2.0_scaffold77G25264 Striga asiatica HOM05D000763 ORTHO05D000599 2.2e-15 85.9 95 54.7
MBI18_g40062_MAGBIO Magnolia biondii HOM05D004600 ORTHO05D005471 1.1e-14 83.6 45 93.3
RcHm_v2.0_Chr1g0341961 Rosa chinensis HOM05D004600 ORTHO05D005471 2.4e-14 82.4 51 84.3
Cre16.g670800 Chlamydomonas reinhardtii HOM05D004600 ORTHO05D005471 5.4e-14 81.3 104 46.2
Pp3c15_6440 Physcomitrium patens HOM05D004600 ORTHO05D005471 3.5e-13 78.6 100 48.0
HanXRQChr10g0286821 Helianthus annuus HOM05D004600 ORTHO05D005471 4.6e-13 78.2 43 88.4
RcHm_v2.0_Chr4g0446751 Rosa chinensis HOM05D004600 ORTHO05D005471 4.6e-13 78.2 50 80.0
MCO15G208 Micromonas commoda HOM05D004600 ORTHO05D005471 6.0e-13 77.8 103 48.5
C03p20070 Brassica napus HOM05D004600 ORTHO05D005471 1.3e-12 76.6 99 52.5
HanXRQChr02g0044381 Helianthus annuus HOM05D004600 ORTHO05D005471 3.9e-12 75.1 43 83.7
A03p17010 Brassica napus HOM05D004600 ORTHO05D005471 5.1e-12 74.7 60 66.7
RcHm_v2.0_Chr3g0457191 Rosa chinensis HOM05D004600 ORTHO05D005471 5.1e-12 74.7 51 76.5
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 6.7e-12 74.3 65 60.0
Oeu019263.1 Olea europaea HOM05D004600 ORTHO05D005471 1.5e-11 73.2 55 70.9
COL.COLO4_33704 Corchorus olitorius HOM05D004600 ORTHO05D005471 2.5e-11 72.4 89 52.8
RcHm_v2.0_Chr1g0342531 Rosa chinensis HOM05D004600 ORTHO05D005471 3.3e-11 72.0 43 81.4
PRCOL_00002235 Prasinoderma coloniale HOM05D004600 ORTHO05D005471 4.3e-11 71.6 106 39.6
BcaC01g05996 Brassica carinata HOM05D004600 ORTHO05D005471 5.6e-11 71.2 97 50.5
Pp3c12_22810 Physcomitrium patens HOM05D004600 ORTHO05D005471 2.6e-08 62.4 59 49.2


User provided reference genes

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