Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 1.4e-82 309.7 166 100.0
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 5.8e-81 304.3 166 98.8
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 8.4e-48 194.1 170 67.6
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 1.9e-44 183.0 164 65.9
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 4.3e-44 181.8 167 64.1
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 9.6e-44 180.6 167 66.5
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 4.8e-43 178.3 164 68.9
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 6.2e-43 177.9 176 61.9
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 5.3e-42 174.9 96 91.7
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 5.3e-42 174.9 178 61.8
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 3.4e-41 172.2 103 83.5
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 7.6e-41 171.0 164 63.4
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 1.7e-40 169.9 161 62.7
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 3.8e-40 168.7 99 88.9
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 4.9e-40 168.3 99 84.8
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 6.4e-40 167.9 158 61.4
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 8.4e-40 167.5 104 81.7
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 1.1e-39 167.2 104 79.8
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 1.4e-39 166.8 103 81.6
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 1.4e-39 166.8 121 76.0
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 1.4e-39 166.8 104 80.8
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 1.4e-39 166.8 103 82.5
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.9e-39 166.4 102 81.4
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.9e-39 166.4 102 81.4
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 2.4e-39 166.0 121 75.2
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 3.2e-39 165.6 162 64.8
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 4.2e-39 165.2 103 82.5
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 5.4e-39 164.9 172 59.3
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 7.1e-39 164.5 137 66.4
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 1.2e-38 163.7 126 69.0
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 1.6e-38 163.3 100 82.0
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 1.6e-38 163.3 171 60.2
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 1.6e-38 163.3 106 81.1
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 2.7e-38 162.5 121 72.7
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 4.6e-38 161.8 125 72.8
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 7.9e-38 161.0 165 60.0
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 1.3e-37 160.2 170 60.0
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 1.3e-37 160.2 97 85.6
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 1.8e-37 159.8 101 80.2
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 2.3e-37 159.5 117 74.4
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 5.1e-37 158.3 89 88.8
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 6.7e-37 157.9 119 75.6
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 6.7e-37 157.9 101 79.2
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 8.7e-37 157.5 91 85.7
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 8.7e-37 157.5 101 79.2
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 1.1e-36 157.1 161 59.6
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 1.1e-36 157.1 157 63.1
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.9e-36 156.4 91 85.7
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 1.9e-36 156.4 143 63.6
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 2.5e-36 156.0 100 81.0
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 2.5e-36 156.0 144 63.9
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 3.3e-36 155.6 96 81.2
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 3.3e-36 155.6 143 63.6
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 4.3e-36 155.2 123 71.5
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 4.3e-36 155.2 95 77.9
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 5.6e-36 154.8 90 84.4
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 2.1e-35 152.9 166 57.8
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 2.1e-35 152.9 159 61.0
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 6.2e-35 151.4 163 55.8
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 1.1e-34 150.6 104 75.0
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 1.4e-34 150.2 103 72.8
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 1.8e-34 149.8 131 67.2
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 2.4e-34 149.4 99 75.8
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 3.1e-34 149.1 100 77.0
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 3.1e-34 149.1 103 71.8
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 5.3e-34 148.3 96 78.1
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 5.3e-34 148.3 129 65.9
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 5.3e-34 148.3 100 75.0
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 6.9e-34 147.9 96 77.1
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 9.0e-34 147.5 96 76.0
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 9.0e-34 147.5 96 76.0
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 1.2e-33 147.1 99 77.8
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 1.2e-33 147.1 102 76.5
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 1.5e-33 146.7 117 67.5
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 1.5e-33 146.7 117 67.5
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 2.0e-33 146.4 147 59.2
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 2.0e-33 146.4 172 54.7
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 2.6e-33 146.0 94 75.5
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 2.6e-33 146.0 164 54.9
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 2.6e-33 146.0 162 56.2
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 4.5e-33 145.2 97 79.4
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 5.8e-33 144.8 88 81.8
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 5.8e-33 144.8 124 66.1
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 1.3e-32 143.7 173 52.0
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 1.7e-32 143.3 179 51.4
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 1.7e-32 143.3 147 62.6
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 3.8e-32 142.1 172 53.5
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 4.9e-32 141.7 171 53.8
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 8.4e-32 141.0 169 53.3
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 8.4e-32 141.0 174 52.9
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 8.4e-32 141.0 141 61.0
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 1.1e-31 140.6 79 88.6
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 2.5e-31 139.4 99 71.7
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 4.2e-31 138.7 169 52.7
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 5.5e-31 138.3 171 53.2
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 5.5e-31 138.3 171 53.2
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 7.1e-31 137.9 162 53.1
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 4.6e-30 135.2 100 70.0
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 1.0e-29 134.0 86 77.9
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 1.8e-29 133.3 77 85.7
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 1.1e-28 130.6 74 87.8
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 4.8e-27 125.2 124 58.1
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.1e-26 124.0 90 71.1
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 1.8e-26 123.2 147 51.0
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 4.0e-26 122.1 85 71.8
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 6.5e-24 114.8 122 56.6
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 5.1e-21 105.1 130 47.7
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 8.7e-21 104.4 82 59.8
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 1.0e-16 90.9 85 45.9
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 1.7e-16 90.1 83 57.8
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 2.2e-16 89.7 49 89.8
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 2.9e-16 89.4 50 90.0
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 3.8e-16 89.0 181 36.5
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 3.8e-16 89.0 181 36.5
Cpa.g.sc2589.1 Carica papaya HOM05D006461 ORTHO05D008199 6.1e-14 81.6 64 70.3
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 5.7e-12 75.1 137 44.5
Actinidia28897 Actinidia chinensis HOM05D006461 ORTHO05D008199 9.7e-12 74.3 44 79.5
AT5G17560 Arabidopsis thaliana HOM05D006461 ORTHO05D008199 6.5e-08 61.6 121 39.7
Mapoly0051s0029 Marchantia polymorpha HOM05D002854 ORTHO05D003051 7.2e-07 58.2 97 40.2
Thhalv10002241m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 6.1e-06 55.1 44 65.9


User provided reference genes

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