Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8P9XRD Arachis hypogaea HOM05D008677 ORTHO05D002434 1.5e-63 246.1 137 100.0
arahy.Tifrunner.gnm1.ann1.W7920A Arachis hypogaea HOM05D008677 ORTHO05D002434 2.0e-42 176.0 130 84.6
Phvul.006G150100 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 6.5e-30 134.4 135 53.3
Glyma.15G107300 Glycine max HOM05D008677 ORTHO05D002434 1.4e-29 133.3 138 58.0
VMungo0540G1774 Vigna mungo HOM05D008677 ORTHO05D002434 7.2e-29 131.0 137 56.2
TPR.G9935 Trifolium pratense HOM05D008677 ORTHO05D002434 3.6e-28 128.6 135 58.5
Ca_00651_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 3.0e-27 125.6 138 57.2
Medtr2g023010 Medicago truncatula HOM05D008677 ORTHO05D002434 8.8e-27 124.0 136 56.6
Lj6g0026915 Lotus japonicus HOM05D008677 ORTHO05D002434 1.8e-24 116.3 140 52.9
Psat1g181240 Pisum sativum HOM05D008677 ORTHO05D002434 1.8e-24 116.3 137 54.7
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 2.2e-22 109.4 135 48.1
Glyma.17G014500 Glycine max HOM05D008677 ORTHO05D002434 9.4e-21 104.0 139 47.5
Glyma.07G259800 Glycine max HOM05D008677 ORTHO05D002434 8.0e-20 100.9 141 46.8
VMungo1215G2206 Vigna mungo HOM05D008677 ORTHO05D002434 8.8e-19 97.4 138 46.4
Glyma.07G259700 Glycine max HOM05D008677 ORTHO05D002434 1.2e-18 97.1 142 47.2
Lalb_Chr07g0177271 Lupinus albus HOM05D008677 ORTHO05D002434 1.2e-18 97.1 139 46.0
Glyma.17G014200 Glycine max HOM05D008677 ORTHO05D002434 3.4e-18 95.5 139 43.9
Glyma.17G014400 Glycine max HOM05D008677 ORTHO05D002434 4.4e-18 95.1 136 47.1
Lalb_Chr18g0056321 Lupinus albus HOM05D008677 ORTHO05D002434 7.5e-18 94.4 135 44.4
Glyma.07G259900 Glycine max HOM05D008677 ORTHO05D002434 9.7e-18 94.0 136 45.6
VMungo1215G0105 Vigna mungo HOM05D008677 ORTHO05D002434 9.7e-18 94.0 137 44.5
Glyma.17G014600 Glycine max HOM05D008677 ORTHO05D002434 6.3e-17 91.3 142 44.4
Ca_00640_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 8.3e-17 90.9 115 50.4
Ca_21088_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 1.1e-16 90.5 162 48.1
Ca_30196_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 1.1e-16 90.5 162 48.1
Glyma.13G205200 Glycine max HOM05D008677 ORTHO05D002434 2.4e-16 89.4 82 62.2
Medtr4g132000 Medicago truncatula HOM05D008677 ORTHO05D002434 1.6e-15 86.7 143 41.3
Lj4g0005888 Lotus japonicus HOM05D008677 ORTHO05D002434 2.0e-15 86.3 139 45.3
Glyma.17G014100 Glycine max HOM05D008677 ORTHO05D002434 5.9e-15 84.7 142 45.1
Phvul.003G078000 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 7.7e-15 84.3 173 41.0
Psat4g006720 Pisum sativum HOM05D008677 ORTHO05D002434 1.3e-14 83.6 145 49.0
Psat4g006760 Pisum sativum HOM05D008677 ORTHO05D002434 1.3e-14 83.6 145 48.3
Lalb_Chr07g0177261 Lupinus albus HOM05D008677 ORTHO05D002434 2.2e-14 82.8 147 41.5
Medtr4g132010 Medicago truncatula HOM05D008677 ORTHO05D002434 8.5e-14 80.9 145 44.1
Psat4g006840 Pisum sativum HOM05D008677 ORTHO05D002434 3.2e-13 79.0 139 48.2
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 9.4e-13 77.4 136 37.5
Lj4g0000389 Lotus japonicus HOM05D008677 ORTHO05D002434 1.6e-12 76.6 127 51.2
VMungo1215G0276 Vigna mungo HOM05D008677 ORTHO05D002434 2.1e-12 76.3 135 39.3
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 2.7e-12 75.9 152 38.8
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 2.7e-12 75.9 140 40.7
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 3.6e-12 75.5 148 39.9
Psat4g006800 Pisum sativum HOM05D008677 ORTHO05D002434 4.7e-12 75.1 143 39.2
TPR.G36987 Trifolium pratense HOM05D008677 ORTHO05D002434 4.7e-12 75.1 156 46.8
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 6.1e-12 74.7 147 38.8
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 6.1e-12 74.7 141 39.0
arahy.Tifrunner.gnm1.ann1.PG586I Arachis hypogaea HOM05D008677 ORTHO05D002434 8.0e-12 74.3 147 38.1
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 1.4e-11 73.6 141 40.4
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 1.8e-11 73.2 143 40.6
TPR.G37017 Trifolium pratense HOM05D008677 ORTHO05D002434 1.8e-11 73.2 150 43.3
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 2.3e-11 72.8 138 35.5
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 5.2e-11 71.6 141 39.0
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 6.8e-11 71.2 142 34.5
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 8.8e-11 70.9 139 37.4
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 1.2e-10 70.5 136 35.3
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 2.0e-10 69.7 140 34.3
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 2.0e-10 69.7 144 36.8
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 2.0e-10 69.7 135 36.3
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 2.6e-10 69.3 139 37.4
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 2.6e-10 69.3 140 36.4
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 3.4e-10 68.9 135 39.3
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 4.4e-10 68.6 135 34.8
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 5.7e-10 68.2 139 36.7
ClCG03G004770 Citrullus lanatus HOM05D003074 ORTHO05D002434 7.5e-10 67.8 137 35.8
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 7.5e-10 67.8 144 32.6
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 9.8e-10 67.4 138 34.8
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 9.8e-10 67.4 140 35.7
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 9.8e-10 67.4 137 35.8
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 1.3e-09 67.0 145 33.8
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 1.7e-09 66.6 135 34.8
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 1.7e-09 66.6 136 38.2
FvH4_3g22640 Fragaria vesca HOM05D003074 ORTHO05D002434 1.7e-09 66.6 149 34.9
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 1.7e-09 66.6 135 32.6
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.2e-09 66.2 144 33.3
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 2.2e-09 66.2 144 33.3
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 2.2e-09 66.2 136 36.8
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 2.2e-09 66.2 137 35.8
MELO3C002460.2 Cucumis melo HOM05D003074 ORTHO05D002434 2.8e-09 65.9 137 35.0
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 2.8e-09 65.9 137 39.4
Psat4g007000 Pisum sativum HOM05D008677 ORTHO05D002434 2.8e-09 65.9 152 34.9
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 2.8e-09 65.9 136 36.0
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 3.7e-09 65.5 144 33.3
FAN11G2929 Fragaria x ananassa HOM05D003074 ORTHO05D002434 4.8e-09 65.1 149 34.2
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 4.8e-09 65.1 149 34.2
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 4.8e-09 65.1 149 34.2
Phvul.003G077900 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 6.3e-09 64.7 135 35.6
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 6.3e-09 64.7 142 33.1
AUR62021958 Chenopodium quinoa HOM05D003074 ORTHO05D002434 8.3e-09 64.3 142 35.2
Eucgr.E04061 Eucalyptus grandis HOM05D003074 ORTHO05D002434 8.3e-09 64.3 147 37.4
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 8.3e-09 64.3 136 34.6
CiPaw.11G189000 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.8e-08 63.2 149 32.9
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 2.4e-08 62.8 135 33.3
Migut.H01829 Erythranthe guttata HOM05D003074 ORTHO05D002434 3.1e-08 62.4 141 35.5
Potri.011G003100 Populus trichocarpa HOM05D003074 ORTHO05D002434 3.1e-08 62.4 137 33.6
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 4.1e-08 62.0 142 33.8
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 5.4e-08 61.6 150 33.3
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 7.0e-08 61.2 139 33.8
CiPaw.10G070500 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.2e-07 60.5 142 35.2
Cc05_g13710 Coffea canephora HOM05D003074 ORTHO05D002434 1.6e-07 60.1 150 32.0
Eucgr.D01318 Eucalyptus grandis HOM05D003074 ORTHO05D002434 2.0e-07 59.7 143 35.0
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 2.7e-07 59.3 144 35.4
MD11G1218800 Malus domestica HOM05D003074 ORTHO05D002434 2.7e-07 59.3 138 35.5
Eucgr.E04063 Eucalyptus grandis HOM05D003074 ORTHO05D002434 3.5e-07 58.9 143 34.3
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 3.5e-07 58.9 140 30.7
AUR62012700 Chenopodium quinoa HOM05D003074 ORTHO05D002434 4.5e-07 58.5 142 34.5
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 4.5e-07 58.5 145 32.4
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 5.9e-07 58.2 135 32.6
Manes.17G038600 Manihot esculenta HOM05D003074 ORTHO05D002434 5.9e-07 58.2 145 32.4
THA.LOC104812967 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 5.9e-07 58.2 147 32.7
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 5.9e-07 58.2 139 35.3
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 1.0e-06 57.4 138 35.5
Sc17g0007340 Simmondsia chinensis HOM05D003074 ORTHO05D002434 1.0e-06 57.4 137 34.3
Atru.chr2.3400 Acer truncatum HOM05D003074 ORTHO05D002434 1.3e-06 57.0 153 34.0
Eucgr.E04066 Eucalyptus grandis HOM05D003074 ORTHO05D002434 2.3e-06 56.2 141 34.8
Thhalv10021814m.g Eutrema salsugineum HOM05D003074 ORTHO05D002434 2.3e-06 56.2 135 30.4
Psat4g006960 Pisum sativum HOM05D008677 ORTHO05D002434 2.3e-06 56.2 85 42.4
CDE05G3459 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 3.8e-06 55.5 135 32.6
ECA246G0494 Erigeron canadensis HOM05D003074 ORTHO05D002434 3.8e-06 55.5 135 33.3
TAR624G0488 Trochodendron aralioides HOM05D003074 ORTHO05D002434 3.8e-06 55.5 124 35.5
Eucgr.E04062 Eucalyptus grandis HOM05D003074 ORTHO05D002434 5.0e-06 55.1 150 33.3
RcHm_v2.0_Chr5g0003291 Rosa chinensis HOM05D003074 ORTHO05D002434 5.0e-06 55.1 137 32.1
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 6.6e-06 54.7 139 33.8
CsaV3_1G010810 Cucumis sativus L. HOM05D003074 ORTHO05D002434 8.6e-06 54.3 128 33.6
unitig_85.g27325 Utricularia gibba HOM05D003074 ORTHO05D002434 8.6e-06 54.3 135 31.9


User provided reference genes

Program Settings