Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8NU3PL Arachis hypogaea HOM05D004238 ORTHO05D004934 2.4e-78 295.4 151 100.0
arahy.Tifrunner.gnm1.ann1.78LW43 Arachis hypogaea HOM05D004238 ORTHO05D004934 3.9e-76 288.1 151 97.4
arahy.Tifrunner.gnm1.ann1.K93WBA Arachis hypogaea HOM05D004238 ORTHO05D004934 4.9e-63 244.6 126 96.8
arahy.Tifrunner.gnm1.ann1.NC6GJT Arachis hypogaea HOM05D004238 ORTHO05D004934 4.5e-56 221.5 117 94.9
arahy.Tifrunner.gnm1.ann1.KCMD1F Arachis hypogaea HOM05D004238 ORTHO05D004934 7.6e-56 220.7 117 94.0
Glyma.08G094600 Glycine max HOM05D004238 ORTHO05D004934 1.9e-51 206.1 116 87.1
Lalb_Chr00c06g0404671 Lupinus albus HOM05D004238 ORTHO05D004934 4.3e-51 204.9 129 78.3
Glyma.05G139300 Glycine max HOM05D004238 ORTHO05D004934 9.6e-51 203.8 115 85.2
VMungo0251G1679 Vigna mungo HOM05D004238 ORTHO05D004934 3.7e-50 201.8 116 84.5
Phvul.002G182700 Phaseolus vulgaris HOM05D004238 ORTHO05D004934 2.4e-49 199.1 116 83.6
Lalb_Chr13g0293671 Lupinus albus HOM05D004238 ORTHO05D004934 2.6e-48 195.7 117 81.2
Lj4g0001453 Lotus japonicus HOM05D004238 ORTHO05D004934 7.6e-48 194.1 116 81.0
Ca_11587_v3 Cicer arietinum L. HOM05D004238 ORTHO05D004934 3.8e-47 191.8 116 80.2
Psat7g083560 Pisum sativum HOM05D004238 ORTHO05D004934 1.9e-46 189.5 117 79.5
TPR.G5108 Trifolium pratense HOM05D004238 ORTHO05D004934 1.9e-46 189.5 116 79.3
CSS0018341 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 7.9e-45 184.1 117 77.8
CSS0035838 Camellia sinensis var. sinensis HOM05D004238 ORTHO05D004934 7.9e-45 184.1 117 77.8
Dinv28139 Davidia involucrata HOM05D004238 ORTHO05D004934 1.8e-44 183.0 116 78.4
CANSAT80G2380 Cannabis sativa HOM05D004238 ORTHO05D004934 3.0e-44 182.2 120 74.2
TWI15G0256 Tripterygium wilfordii HOM05D004238 ORTHO05D004934 3.9e-44 181.8 119 73.9
Manes.01G014900 Manihot esculenta HOM05D004238 ORTHO05D004934 1.5e-43 179.9 114 77.2
Duzib084G0471 Durio zibethinus HOM05D004238 ORTHO05D004934 1.9e-43 179.5 116 75.9
Hma1.2p1_1283F.1_g272760 Hydrangea macrophylla HOM05D004238 ORTHO05D004934 1.9e-43 179.5 117 75.2
CiPaw.16G088800 Carya illinoinensis HOM05D004238 ORTHO05D004934 2.5e-43 179.1 116 75.0
Dinv12220 Davidia involucrata HOM05D004238 ORTHO05D004934 3.3e-43 178.7 116 75.9
Haze_18725 Corylus avellana HOM05D004238 ORTHO05D004934 4.3e-43 178.3 117 76.1
MD14G1229600 Malus domestica HOM05D004238 ORTHO05D004934 4.3e-43 178.3 120 73.3
Lj9C425T3 Lonicera japonica HOM05D004238 ORTHO05D004934 7.4e-43 177.6 117 76.1
GSVIVG01008335001 Vitis vinifera HOM05D004238 ORTHO05D004934 7.4e-43 177.6 119 74.8
MD06G1220000 Malus domestica HOM05D004238 ORTHO05D004934 9.6e-43 177.2 112 77.7
Prupe.5G224400 Prunus persica HOM05D004238 ORTHO05D004934 1.6e-42 176.4 120 71.7
Nitab4.5_0001986g0030 Nicotiana tabacum HOM05D004238 ORTHO05D004934 1.4e-41 173.3 111 75.7
Oeu000985.1 Olea europaea HOM05D004238 ORTHO05D004934 1.4e-41 173.3 126 67.5
Rhsim08G0130500 Rhododendron simsii HOM05D004238 ORTHO05D004934 3.1e-41 172.2 116 72.4
Rhsim08G0130600 Rhododendron simsii HOM05D004238 ORTHO05D004934 3.1e-41 172.2 116 72.4
CAN.G1129.11 Capsicum annuum HOM05D004238 ORTHO05D004934 5.3e-41 171.4 117 70.9
CsaV3_1G004010 Cucumis sativus L. HOM05D004238 ORTHO05D004934 9.0e-41 170.6 125 72.8
PGSC0003DMG400005732 Solanum tuberosum HOM05D004238 ORTHO05D004934 9.0e-41 170.6 117 70.9
Sed0011571 Sechium edule HOM05D004238 ORTHO05D004934 1.2e-40 170.2 124 71.8
Solyc03g119200.4 Solanum lycopersicum HOM05D004238 ORTHO05D004934 1.2e-40 170.2 117 70.9
FvH4_5g16670 Fragaria vesca HOM05D004238 ORTHO05D004934 1.5e-40 169.9 119 71.4
FAN18G3483 Fragaria x ananassa HOM05D004238 ORTHO05D004934 1.5e-40 169.9 119 71.4
Nitab4.5_0004028g0040 Nicotiana tabacum HOM05D004238 ORTHO05D004934 2.0e-40 169.5 117 70.9
MELO3C017324.2 Cucumis melo HOM05D004238 ORTHO05D004934 2.6e-40 169.1 136 67.6
FAN13G1096 Fragaria x ananassa HOM05D004238 ORTHO05D004934 2.6e-40 169.1 119 70.6
FAN08G0774 Fragaria x ananassa HOM05D004238 ORTHO05D004934 3.4e-40 168.7 118 71.2
ClCG06G014610 Citrullus lanatus HOM05D004238 ORTHO05D004934 4.5e-40 168.3 117 73.5
Atru.chr9.900 Acer truncatum HOM05D004238 ORTHO05D004934 5.9e-40 167.9 114 71.9
FAN04G1535 Fragaria x ananassa HOM05D004238 ORTHO05D004934 5.9e-40 167.9 119 70.6
Nn4g23948 Nelumbo nucifera HOM05D004238 ORTHO05D004934 5.9e-40 167.9 111 73.0
Thecc.03G040700 Theobroma cacao HOM05D004238 ORTHO05D004934 5.9e-40 167.9 131 64.9
RcHm_v2.0_Chr7g0179451 Rosa chinensis HOM05D004238 ORTHO05D004934 7.6e-40 167.5 117 71.8
DCAR_015154 Daucus carota HOM05D004238 ORTHO05D004934 1.0e-39 167.2 112 73.2
Lsat_1_v5_gn_8_143241 Lactuca sativa HOM05D004238 ORTHO05D004934 1.0e-39 167.2 117 69.2
Potri.012G054200 Populus trichocarpa HOM05D004238 ORTHO05D004934 1.7e-39 166.4 112 74.1
PGR083G1292 Punica granatum HOM05D004238 ORTHO05D004934 2.2e-39 166.0 132 65.9
TAR371G0763 Trochodendron aralioides HOM05D004238 ORTHO05D004934 2.2e-39 166.0 123 69.9
Gohir.A07G066800 Gossypium hirsutum HOM05D004238 ORTHO05D004934 3.8e-39 165.2 116 69.0
TAR371G0419 Trochodendron aralioides HOM05D004238 ORTHO05D004934 3.8e-39 165.2 123 69.9
TAR426G0005 Trochodendron aralioides HOM05D004238 ORTHO05D004934 3.8e-39 165.2 116 70.7
TAR535G0010 Trochodendron aralioides HOM05D004238 ORTHO05D004934 3.8e-39 165.2 116 70.7
Cc04_g06880 Coffea canephora HOM05D004238 ORTHO05D004934 6.5e-39 164.5 112 73.2
Gohir.D07G071400 Gossypium hirsutum HOM05D004238 ORTHO05D004934 6.5e-39 164.5 116 69.0
Gorai.001G075300 Gossypium raimondii HOM05D004238 ORTHO05D004934 6.5e-39 164.5 116 69.0
Aqoxy3G00204 Aquilegia oxysepala HOM05D004238 ORTHO05D004934 1.9e-38 162.9 113 69.9
ATR0807G117 Amborella trichopoda HOM05D004238 ORTHO05D004934 7.2e-38 161.0 112 67.9
Cpa.g.sc3.467 Carica papaya HOM05D004238 ORTHO05D004934 7.2e-38 161.0 120 67.5
Peaxi162Scf00683g00158 Petunia axillaris HOM05D004238 ORTHO05D004934 7.2e-38 161.0 122 65.6
COL.COLO4_20838 Corchorus olitorius HOM05D004238 ORTHO05D004934 9.3e-38 160.6 116 69.8
Sabra12G0038000 Salix brachista HOM05D004238 ORTHO05D004934 1.2e-37 160.2 107 74.8
MBI09_g25158_MAGBIO Magnolia biondii HOM05D004238 ORTHO05D004934 1.6e-37 159.8 115 68.7
Hund02354 Selenicereus undatus HOM05D004238 ORTHO05D004934 1.6e-37 159.8 111 70.3
MSTRG.11313 Avicennia marina HOM05D004238 ORTHO05D004934 6.1e-37 157.9 130 63.8
Duzib205G0622 Durio zibethinus HOM05D004238 ORTHO05D004934 6.1e-37 157.9 116 67.2
ECA233G1745 Erigeron canadensis HOM05D004238 ORTHO05D004934 7.9e-37 157.5 110 66.4
Migut.I00409 Erythranthe guttata HOM05D004238 ORTHO05D004934 7.9e-37 157.5 117 66.7
PSO017G2643 Papaver somniferum HOM05D004238 ORTHO05D004934 2.3e-36 156.0 132 59.1
C05p47680 Brassica napus HOM05D004238 ORTHO05D004934 3.0e-36 155.6 110 70.9
BolC5t33477H Brassica oleracea HOM05D004238 ORTHO05D004934 3.0e-36 155.6 110 70.9
PSO478G0260 Papaver somniferum HOM05D004238 ORTHO05D004934 3.0e-36 155.6 128 60.2
Carub.0003s1804 Capsella rubella HOM05D004238 ORTHO05D004934 8.7e-36 154.1 110 70.0
BraA05t21977Z Brassica rapa HOM05D004238 ORTHO05D004934 1.5e-35 153.3 110 70.0
A05p31380 Brassica napus HOM05D004238 ORTHO05D004934 7.4e-35 151.0 110 68.2
CDE08G0051 Ceratophyllum demersum HOM05D004238 ORTHO05D004934 2.8e-34 149.1 113 63.7
Eucgr.B00825 Eucalyptus grandis HOM05D004238 ORTHO05D004934 4.8e-34 148.3 115 65.2
Thhalv10022164m.g Eutrema salsugineum HOM05D004238 ORTHO05D004934 6.3e-34 147.9 110 66.4
Thhalv10020846m.g Eutrema salsugineum HOM05D004238 ORTHO05D004934 8.2e-34 147.5 110 66.4
Aa31LG8G5120 Aethionema arabicum HOM05D004238 ORTHO05D004934 1.8e-33 146.4 110 66.4
HPP92_008849 Vanilla planifolia HOM05D004238 ORTHO05D004934 2.4e-33 146.0 110 64.5
AL3G31500 Arabidopsis lyrata HOM05D004238 ORTHO05D004934 6.9e-33 144.4 112 66.1
THA.LOC104820382 Tarenaya hassleriana HOM05D004238 ORTHO05D004934 6.9e-33 144.4 109 66.1
Dinv34796 Davidia involucrata HOM05D004238 ORTHO05D004934 9.1e-33 144.1 114 62.3
Os01g0138900 Oryza sativa ssp. japonica HOM05D004238 ORTHO05D004934 2.0e-32 142.9 113 62.8
Sc04g0003400 Simmondsia chinensis HOM05D004238 ORTHO05D004934 5.9e-32 141.4 112 63.4
AT3G18270 Arabidopsis thaliana HOM05D004238 ORTHO05D004934 1.0e-31 140.6 112 64.3
HanXRQChr17g0559411 Helianthus annuus HOM05D004238 ORTHO05D004934 3.8e-31 138.7 107 62.6
HPP92_008863 Vanilla planifolia HOM05D004238 ORTHO05D004934 6.5e-31 137.9 110 62.7
DCAR_024088 Daucus carota HOM05D004238 ORTHO05D004934 1.1e-30 137.1 124 54.8
Manes.02G071200 Manihot esculenta HOM05D004238 ORTHO05D004934 9.4e-30 134.0 112 62.5
arahy.Tifrunner.gnm1.ann1.QA2PAR Arachis hypogaea HOM05D004238 ORTHO05D004934 3.6e-29 132.1 74 86.5
Atru.chr1.1618 Acer truncatum HOM05D004238 ORTHO05D004934 6.1e-29 131.3 111 63.1
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 1.8e-28 129.8 72 90.3
DCAR_011371 Daucus carota HOM05D004238 ORTHO05D004934 1.8e-28 129.8 108 60.2
DCAR_011373 Daucus carota HOM05D004238 ORTHO05D004934 3.0e-28 129.0 124 52.4
Ciclev10011789m.g Citrus clementina HOM05D004238 ORTHO05D004934 8.8e-28 127.5 112 58.0
Duzib138G0550 Durio zibethinus HOM05D004238 ORTHO05D004934 8.8e-28 127.5 111 62.2
DCAR_011370 Daucus carota HOM05D004238 ORTHO05D004934 1.7e-26 123.2 109 58.7
COL.COLO4_09370 Corchorus olitorius HOM05D004238 ORTHO05D004934 2.8e-26 122.5 114 57.9
Psat5g132800 Pisum sativum HOM05D004238 ORTHO05D004934 4.8e-26 121.7 77 77.9
Thecc.04G129000 Theobroma cacao HOM05D004238 ORTHO05D004934 4.8e-26 121.7 112 58.0
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 8.2e-26 120.9 77 77.9
MELO3C008155.2 Cucumis melo HOM05D004238 ORTHO05D004934 4.1e-25 118.6 113 49.6
Gohir.A11G165600 Gossypium hirsutum HOM05D004238 ORTHO05D004934 6.9e-25 117.9 112 55.4
Pp3c2_34370 Physcomitrium patens HOM05D004238 ORTHO05D004934 9.1e-25 117.5 106 55.7
CsaV3_2G033830 Cucumis sativus L. HOM05D004238 ORTHO05D004934 1.2e-24 117.1 113 49.6
ClCG11G007750 Citrullus lanatus HOM05D004238 ORTHO05D004934 1.5e-24 116.7 115 48.7
Mapoly0058s0107 Marchantia polymorpha HOM05D004238 ORTHO05D004934 2.0e-24 116.3 104 54.8
Gohir.D11G171700 Gossypium hirsutum HOM05D004238 ORTHO05D004934 5.9e-24 114.8 112 54.5
Sp3g16390 Schrenkiella parvula HOM05D004238 ORTHO05D004934 3.8e-23 112.1 110 56.4
AagrBONN_evm.TU.Sc2ySwM_117.3507 Anthoceros agrestis HOM05D004238 ORTHO05D004934 6.5e-23 111.3 99 57.6
Potri.015G044400 Populus trichocarpa HOM05D004238 ORTHO05D004934 4.7e-21 105.1 78 65.4
SEGI_36538 Sequoiadendron giganteum HOM05D004238 ORTHO05D004934 6.1e-21 104.8 110 52.7
Cpa.g.sc170.33 Carica papaya HOM05D004238 ORTHO05D004934 1.5e-19 100.1 117 50.4
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 3.3e-19 99.0 53 90.6
SMO146G0383 Selaginella moellendorffii HOM05D004238 ORTHO05D004934 5.7e-19 98.2 109 46.8
CANSAT78G0772 Cannabis sativa HOM05D004238 ORTHO05D004934 1.3e-18 97.1 114 49.1
DCAR_011366 Daucus carota HOM05D004238 ORTHO05D004934 1.8e-17 93.2 112 43.8
DCAR_011367 Daucus carota HOM05D004238 ORTHO05D004934 1.8e-17 93.2 106 46.2
Eucgr.B00826 Eucalyptus grandis HOM05D004238 ORTHO05D004934 2.0e-16 89.7 106 49.1
SMO146G0146 Selaginella moellendorffii HOM05D004238 ORTHO05D004934 3.8e-15 85.5 88 50.0
arahy.Tifrunner.gnm1.ann1.NZ4Q1A Arachis hypogaea HOM05D000129 ORTHO05D014893 1.5e-14 83.6 45 86.7
C08p35620 Brassica napus HOM05D004238 ORTHO05D004934 1.9e-14 83.2 67 65.7
arahy.Tifrunner.gnm1.ann1.DRRV3Z Arachis hypogaea HOM05D000129 ORTHO05D014893 4.2e-14 82.0 80 57.5
arahy.Tifrunner.gnm1.ann1.583R3C Arachis hypogaea HOM05D004238 ORTHO05D014893 5.5e-14 81.6 42 92.9
Zm00001eb312660 Zea mays HOM05D004238 ORTHO05D004934 5.2e-12 75.1 76 52.6
C05p38610 Brassica napus HOM05D004238 ORTHO05D004934 1.5e-11 73.6 100 47.0
BolC5t32601H Brassica oleracea HOM05D004238 ORTHO05D004934 1.5e-11 73.6 100 47.0
arahy.Tifrunner.gnm1.ann1.4RSR2L Arachis hypogaea HOM05D004238 ORTHO05D014893 4.4e-11 72.0 38 89.5
Psat0s1333g0160 Pisum sativum HOM05D004238 ORTHO05D004934 1.1e-06 57.4 38 73.7
BcaC05g27863 Brassica carinata HOM05D002270 ORTHO05D002866 2.5e-06 56.2 66 48.5
Zm00001eb184180 Zea mays HOM05D005051 ORTHO05D005945 4.2e-06 55.5 46 60.9


User provided reference genes

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