Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 1.7e-128 462.6 222 100.0
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 4.9e-112 407.9 222 90.1
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 1.5e-92 343.2 222 77.0
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 7.4e-92 340.9 222 77.0
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 3.7e-91 338.6 222 76.1
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 6.3e-91 337.8 222 76.1
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 4.1e-90 335.1 222 76.1
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 2.9e-88 328.9 222 74.3
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 1.9e-87 326.2 219 74.4
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 2.5e-87 325.9 222 73.0
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 5.5e-87 324.7 223 74.9
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 6.7e-85 317.8 218 72.0
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 2.0e-84 316.2 226 72.6
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 3.7e-83 312.0 190 78.4
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 3.7e-83 312.0 222 70.7
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 4.8e-83 311.6 222 71.2
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 4.8e-83 311.6 222 71.2
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 6.3e-83 311.2 222 71.2
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 8.2e-83 310.8 213 71.4
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 8.2e-83 310.8 222 72.1
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 1.1e-82 310.5 222 72.1
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 1.1e-82 310.5 225 70.7
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 1.8e-82 309.7 222 68.0
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.8e-82 309.7 222 71.2
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 4.1e-82 308.5 230 68.3
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 7.0e-82 307.8 223 69.5
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 1.2e-81 307.0 226 68.1
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 1.6e-81 306.6 228 68.4
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 1.6e-81 306.6 211 70.6
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 2.0e-81 306.2 187 78.6
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 2.0e-81 306.2 233 70.0
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 2.6e-81 305.8 222 68.0
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 3.5e-81 305.4 193 74.1
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 3.5e-81 305.4 225 67.1
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 1.0e-80 303.9 191 74.9
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 1.0e-80 303.9 229 67.7
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 1.3e-80 303.5 224 67.4
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 1.3e-80 303.5 223 67.3
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 1.7e-80 303.1 187 76.5
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 1.7e-80 303.1 187 76.5
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 1.7e-80 303.1 187 76.5
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 1.7e-80 303.1 187 76.5
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 2.9e-80 302.4 190 75.3
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 3.8e-80 302.0 230 66.5
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 3.8e-80 302.0 222 68.9
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 5.0e-80 301.6 222 67.6
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 6.5e-80 301.2 223 68.6
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 1.1e-79 300.4 187 75.4
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 1.5e-79 300.1 191 73.8
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 2.5e-79 299.3 222 65.8
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 2.5e-79 299.3 223 66.8
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 5.5e-79 298.1 187 75.9
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 7.2e-79 297.7 223 67.7
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 9.4e-79 297.4 222 66.7
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 9.4e-79 297.4 222 66.2
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 1.2e-78 297.0 222 67.1
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 1.2e-78 297.0 222 66.2
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 4.7e-78 295.0 222 67.1
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 4.7e-78 295.0 189 75.1
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 1.8e-77 293.1 225 64.4
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 1.8e-77 293.1 190 73.7
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 4.0e-77 292.0 235 64.7
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 6.7e-77 291.2 199 71.4
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 6.7e-77 291.2 220 65.0
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 8.8e-77 290.8 222 67.1
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.5e-76 290.0 222 66.7
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 2.6e-76 289.3 226 63.7
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 2.6e-76 289.3 229 64.6
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 2.6e-76 289.3 218 64.2
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 4.4e-76 288.5 222 65.3
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 5.7e-76 288.1 212 65.1
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 9.7e-76 287.3 193 74.6
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 1.3e-75 287.0 218 65.1
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 3.7e-75 285.4 222 64.4
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 4.8e-75 285.0 222 64.4
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 4.8e-75 285.0 200 70.5
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 1.4e-74 283.5 238 61.8
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 1.2e-73 280.4 227 62.1
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.0e-72 277.3 174 75.9
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 1.9e-71 273.1 222 64.9
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 8.0e-70 267.7 174 73.6
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 1.0e-69 267.3 194 67.0
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 5.9e-65 251.5 161 76.4
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 5.9e-65 251.5 201 65.7
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 5.9e-65 251.5 200 62.5
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 2.9e-64 249.2 224 59.8
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 5.0e-64 248.4 161 72.7
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.9e-63 246.5 162 74.7
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 7.2e-63 244.6 162 71.0
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 5.2e-61 238.4 191 62.8
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 5.2e-61 238.4 161 73.3
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 7.5e-60 234.6 202 58.4
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 1.7e-59 233.4 158 71.5
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 4.7e-54 215.3 173 59.5
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 1.8e-53 213.4 182 59.9
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 3.0e-53 212.6 213 51.6
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 6.8e-53 211.5 173 60.1
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 4.4e-52 208.8 132 76.5
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 2.6e-44 183.0 213 49.3
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 3.4e-44 182.6 175 52.6
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 3.8e-27 125.9 155 42.6
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 2.9e-19 99.8 165 42.4
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 1.2e-09 67.8 37 78.4
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 7.4e-07 58.5 154 33.1


User provided reference genes

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