Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8I3UM6 Arachis hypogaea HOM05D003993 ORTHO05D005336 7.6e-58 226.9 108 100.0
arahy.Tifrunner.gnm1.ann1.M0TH05 Arachis hypogaea HOM05D003993 ORTHO05D005336 3.2e-48 194.9 108 87.0
Glyma.12G214500 Glycine max HOM05D003993 ORTHO05D005336 3.1e-35 151.8 106 69.8
VMungo1080G1710 Vigna mungo HOM05D003993 ORTHO05D005336 5.3e-35 151.0 106 68.9
arahy.Tifrunner.gnm1.ann1.C7DQ5B Arachis hypogaea HOM05D003993 ORTHO05D005336 1.5e-34 149.4 106 68.9
arahy.Tifrunner.gnm1.ann1.P0I1SB Arachis hypogaea HOM05D003993 ORTHO05D005336 1.5e-34 149.4 106 68.9
arahy.Tifrunner.gnm1.ann1.YETR49 Arachis hypogaea HOM05D003993 ORTHO05D005336 1.5e-34 149.4 106 68.9
Lalb_Chr19g0134741 Lupinus albus HOM05D003993 ORTHO05D005336 2.0e-34 149.1 107 67.3
Glyma.13G287100 Glycine max HOM05D003993 ORTHO05D005336 2.9e-33 145.2 106 67.9
Medtr2g082910 Medicago truncatula HOM05D003993 ORTHO05D005336 4.2e-32 141.4 105 66.7
Phvul.005G091400 Phaseolus vulgaris HOM05D003993 ORTHO05D005336 5.5e-32 141.0 106 64.2
Ca_01754_v3 Cicer arietinum L. HOM05D003993 ORTHO05D005336 9.3e-32 140.2 106 65.1
TPR.G36724 Trifolium pratense HOM05D003993 ORTHO05D005336 1.6e-31 139.4 105 63.8
Lj3g0021702 Lotus japonicus HOM05D003993 ORTHO05D005336 2.7e-31 138.7 108 65.7
arahy.Tifrunner.gnm1.ann1.D8T6NU Arachis hypogaea HOM05D003993 ORTHO05D005336 7.9e-31 137.1 83 77.1
Psat5g251760 Pisum sativum HOM05D003993 ORTHO05D005336 7.9e-31 137.1 105 63.8
Lalb_Chr14g0366101 Lupinus albus HOM05D003993 ORTHO05D005336 2.3e-30 135.6 107 61.7
Lj3g0011163 Lotus japonicus HOM05D003993 ORTHO05D005336 6.7e-30 134.0 106 64.2
Phvul.011G140701 Phaseolus vulgaris HOM05D003993 ORTHO05D005336 6.7e-30 134.0 106 64.2
VMungo1127G1901 Vigna mungo HOM05D003993 ORTHO05D005336 1.5e-29 132.9 106 61.3
arahy.Tifrunner.gnm1.ann1.BQ4HID Arachis hypogaea HOM05D003993 ORTHO05D005336 4.3e-29 131.3 78 84.6
CiPaw.11G183500 Carya illinoinensis HOM05D003993 ORTHO05D005336 5.7e-29 131.0 106 61.3
Medtr4g081300 Medicago truncatula HOM05D003993 ORTHO05D005336 5.7e-29 131.0 106 65.1
QL08p013350 Quercus lobata HOM05D003993 ORTHO05D005336 7.4e-29 130.6 105 61.9
Psat7g122440 Pisum sativum HOM05D003993 ORTHO05D005336 1.7e-28 129.4 108 61.1
Prupe.4G202100 Prunus persica HOM05D003993 ORTHO05D005336 6.3e-28 127.5 106 62.3
Cfa020417 Carpinus fangiana HOM05D003993 ORTHO05D005336 1.1e-27 126.7 106 61.3
Haze_09608 Corylus avellana HOM05D003993 ORTHO05D005336 1.1e-27 126.7 106 60.4
MD11G1227200 Malus domestica HOM05D003993 ORTHO05D005336 3.1e-27 125.2 106 61.3
Glyma.12G135700 Glycine max HOM05D003993 ORTHO05D005336 5.3e-27 124.4 106 57.5
MD03G1211800 Malus domestica HOM05D003993 ORTHO05D005336 9.1e-27 123.6 106 62.3
MELO3C025431.2 Cucumis melo HOM05D003993 ORTHO05D005336 2.6e-26 122.1 107 58.9
CsaV3_3G005470 Cucumis sativus L. HOM05D003993 ORTHO05D005336 2.6e-26 122.1 106 58.5
CANSAT11G1844 Cannabis sativa HOM05D003993 ORTHO05D005336 5.9e-26 120.9 104 61.5
RcHm_v2.0_Chr5g0037331 Rosa chinensis HOM05D003993 ORTHO05D005336 5.9e-26 120.9 104 61.5
Cpa.g.sc97.71 Carica papaya HOM05D003993 ORTHO05D005336 1.0e-25 120.2 105 60.0
GSVIVG01014604001 Vitis vinifera HOM05D003993 ORTHO05D005336 1.0e-25 120.2 106 56.6
ClCG10G005790 Citrullus lanatus HOM05D003993 ORTHO05D005336 1.3e-25 119.8 107 57.9
Sed0012816 Sechium edule HOM05D003993 ORTHO05D005336 1.3e-25 119.8 107 57.0
Dinv22306 Davidia involucrata HOM05D003993 ORTHO05D005336 1.7e-25 119.4 105 55.2
TWI38G0109 Tripterygium wilfordii HOM05D003993 ORTHO05D005336 5.0e-25 117.9 99 57.6
Atru.chr2.3206 Acer truncatum HOM05D003993 ORTHO05D005336 1.1e-24 116.7 80 67.5
Manes.15G076600 Manihot esculenta HOM05D003993 ORTHO05D005336 1.1e-24 116.7 106 55.7
Nitab4.5_0000397g0110 Nicotiana tabacum HOM05D003993 ORTHO05D005336 1.1e-24 116.7 83 63.9
Nitab4.5_0009192g0040 Nicotiana tabacum HOM05D003993 ORTHO05D005336 1.1e-24 116.7 83 63.9
Potri.001G417200 Populus trichocarpa HOM05D003993 ORTHO05D005336 1.1e-24 116.7 97 59.8
SGA_v2.0_scaffold320G48573 Striga asiatica HOM05D003993 ORTHO05D005336 1.4e-24 116.3 106 54.7
Sc16g0006470 Simmondsia chinensis HOM05D003993 ORTHO05D005336 1.9e-24 115.9 104 54.8
TWI39G1096 Tripterygium wilfordii HOM05D003993 ORTHO05D005336 3.2e-24 115.2 107 56.1
Potri.011G132800 Populus trichocarpa HOM05D003993 ORTHO05D005336 4.2e-24 114.8 83 63.9
Ciclev10007272m.g Citrus clementina HOM05D003993 ORTHO05D005336 5.5e-24 114.4 80 65.0
CAN.G337.149 Capsicum annuum HOM05D003993 ORTHO05D005336 7.2e-24 114.0 90 60.0
Cc05_g13220 Coffea canephora HOM05D003993 ORTHO05D005336 7.2e-24 114.0 75 68.0
Oeu032440.1 Olea europaea HOM05D003993 ORTHO05D005336 7.2e-24 114.0 105 53.3
Actinidia09963 Actinidia chinensis HOM05D003993 ORTHO05D005336 1.2e-23 113.2 83 60.2
FAN21G2881 Fragaria x ananassa HOM05D003993 ORTHO05D005336 1.6e-23 112.8 99 58.6
Solyc07g064080.4 Solanum lycopersicum HOM05D003993 ORTHO05D005336 1.6e-23 112.8 83 62.7
Migut.H01858 Erythranthe guttata HOM05D003993 ORTHO05D005336 2.1e-23 112.5 75 68.0
FvH4_3g21780 Fragaria vesca HOM05D003993 ORTHO05D005336 2.1e-23 112.5 99 58.6
FAN11G2565 Fragaria x ananassa HOM05D003993 ORTHO05D005336 2.1e-23 112.5 99 58.6
Sabra11G0119600 Salix brachista HOM05D003993 ORTHO05D005336 2.1e-23 112.5 83 62.7
PGR031G1242 Punica granatum HOM05D003993 ORTHO05D005336 3.6e-23 111.7 78 67.9
SalBow7G3755 Salvia bowleyana HOM05D003993 ORTHO05D005336 3.6e-23 111.7 85 63.5
Sopen07g032220 Solanum pennellii HOM05D003993 ORTHO05D005336 3.6e-23 111.7 83 61.4
Eucgr.F03424 Eucalyptus grandis HOM05D003993 ORTHO05D005336 4.7e-23 111.3 99 53.5
FAN25G1663 Fragaria x ananassa HOM05D003993 ORTHO05D005336 6.1e-23 110.9 99 57.6
CSS0014856 Camellia sinensis var. sinensis HOM05D003993 ORTHO05D005336 1.0e-22 110.2 106 51.9
TAR624G0674 Trochodendron aralioides HOM05D003993 ORTHO05D005336 1.4e-22 109.8 106 50.9
DCAR_010016 Daucus carota HOM05D003993 ORTHO05D005336 1.8e-22 109.4 75 62.7
FAN16G1112 Fragaria x ananassa HOM05D003993 ORTHO05D005336 1.8e-22 109.4 99 57.6
Peaxi162Scf01086g00149 Petunia axillaris HOM05D003993 ORTHO05D005336 1.8e-22 109.4 83 60.2
AUR62020558 Chenopodium quinoa HOM05D003993 ORTHO05D005336 2.3e-22 109.0 106 51.9
HanXRQChr11g0332991 Helianthus annuus HOM05D003993 ORTHO05D005336 3.0e-22 108.6 75 64.0
TAR626G1606 Trochodendron aralioides HOM05D003993 ORTHO05D005336 3.0e-22 108.6 106 50.0
Aa31LG8G7470 Aethionema arabicum HOM05D003993 ORTHO05D005336 3.9e-22 108.2 106 51.9
AUR62015640 Chenopodium quinoa HOM05D003993 ORTHO05D005336 5.1e-22 107.8 106 50.9
ECA236G0263 Erigeron canadensis HOM05D003993 ORTHO05D005336 6.7e-22 107.5 82 61.0
Lj8C165T11 Lonicera japonica HOM05D003993 ORTHO05D005336 8.8e-22 107.1 82 58.5
Aqoxy4G02086 Aquilegia oxysepala HOM05D003993 ORTHO05D005336 1.5e-21 106.3 105 49.5
Duzib213G0987 Durio zibethinus HOM05D003993 ORTHO05D005336 1.5e-21 106.3 106 52.8
Gohir.A01G074400 Gossypium hirsutum HOM05D003993 ORTHO05D005336 1.5e-21 106.3 106 52.8
Lsat_1_v5_gn_7_108360 Lactuca sativa HOM05D003993 ORTHO05D005336 2.6e-21 105.5 91 50.5
MBI18_g30688_MAGBIO Magnolia biondii HOM05D003993 ORTHO05D005336 2.6e-21 105.5 92 53.3
Nn1g03663 Nelumbo nucifera HOM05D003993 ORTHO05D005336 3.3e-21 105.1 101 50.5
CARHR096540 Cardamine hirsuta HOM05D003993 ORTHO05D005336 5.7e-21 104.4 106 50.9
unitig_26.g9969 Utricularia gibba HOM05D003993 ORTHO05D005336 5.7e-21 104.4 81 58.0
Gohir.D01G060900 Gossypium hirsutum HOM05D003993 ORTHO05D005336 7.4e-21 104.0 106 51.9
Gorai.002G082300 Gossypium raimondii HOM05D003993 ORTHO05D005336 7.4e-21 104.0 106 51.9
Zm00001eb431410 Zea mays HOM05D003993 ORTHO05D005336 7.4e-21 104.0 74 60.8
THA.LOC104817894 Tarenaya hassleriana HOM05D003993 ORTHO05D005336 9.7e-21 103.6 74 62.2
Carub.0003s2068 Capsella rubella HOM05D003993 ORTHO05D005336 1.7e-20 102.8 106 50.0
PSO675G0751 Papaver somniferum HOM05D003993 ORTHO05D005336 2.2e-20 102.4 83 54.2
Sp3g18740 Schrenkiella parvula HOM05D003993 ORTHO05D005336 2.2e-20 102.4 83 59.0
Thhalv10019934m.g Eutrema salsugineum HOM05D003993 ORTHO05D005336 3.7e-20 101.7 106 49.1
AT3G20720 Arabidopsis thaliana HOM05D003993 ORTHO05D005336 4.8e-20 101.3 106 48.1
COL.COLO4_09564 Corchorus olitorius HOM05D003993 ORTHO05D005336 4.8e-20 101.3 106 50.9
PSO541G2178 Papaver somniferum HOM05D003993 ORTHO05D005336 4.8e-20 101.3 83 54.2
SEGI_25073 Sequoiadendron giganteum HOM05D003993 ORTHO05D005336 4.8e-20 101.3 75 57.3
AL3G34640 Arabidopsis lyrata HOM05D003993 ORTHO05D005336 1.1e-19 100.1 106 49.1
BcaC09g49013 Brassica carinata HOM05D003993 ORTHO05D005336 1.4e-19 99.8 106 48.1
C01p43520 Brassica napus HOM05D003993 ORTHO05D005336 1.4e-19 99.8 106 48.1
BolC1t04312H Brassica oleracea HOM05D003993 ORTHO05D005336 1.4e-19 99.8 106 48.1
Thecc.07G054200 Theobroma cacao HOM05D003993 ORTHO05D005336 1.4e-19 99.8 72 62.5
SHI31871 Sapria himalayana HOM05D003993 ORTHO05D005336 1.8e-19 99.4 84 53.6
BraA01t03515Z Brassica rapa HOM05D003993 ORTHO05D005336 2.4e-19 99.0 106 49.1
CSS0003157 Camellia sinensis var. sinensis HOM05D003993 ORTHO05D005336 2.4e-19 99.0 72 62.5
A01p34110 Brassica napus HOM05D003993 ORTHO05D005336 4.1e-19 98.2 106 48.1
Duzib170G0292 Durio zibethinus HOM05D003993 ORTHO05D005336 4.1e-19 98.2 72 62.5
Os04g0628600 Oryza sativa ssp. japonica HOM05D003993 ORTHO05D005336 4.1e-19 98.2 83 54.2
HPP92_011131 Vanilla planifolia HOM05D003993 ORTHO05D005336 6.9e-19 97.4 82 53.7
EL10Ac4g07982 Beta vulgaris HOM05D003993 ORTHO05D005336 9.1e-19 97.1 83 53.0
BcaB04g20636 Brassica carinata HOM05D003993 ORTHO05D005336 2.0e-18 95.9 83 54.2
Gohir.A04G022400 Gossypium hirsutum HOM05D003993 ORTHO05D005336 3.4e-18 95.1 105 48.6
Gohir.D05G365000 Gossypium hirsutum HOM05D003993 ORTHO05D005336 3.4e-18 95.1 105 48.6
Gorai.009G427300 Gossypium raimondii HOM05D003993 ORTHO05D005336 4.5e-18 94.7 105 48.6
ATR0073G006 Amborella trichopoda HOM05D003993 ORTHO05D005336 5.9e-18 94.4 91 48.4
Hund02131 Selenicereus undatus HOM05D003993 ORTHO05D005336 1.0e-17 93.6 78 56.4
Rhsim07G0149200 Rhododendron simsii HOM05D003993 ORTHO05D005336 5.0e-17 91.3 75 57.3
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 6.5e-17 90.9 104 42.3
Hund02134 Selenicereus undatus HOM05D003993 ORTHO05D005336 8.5e-17 90.5 66 63.6
AagrBONN_evm.TU.Sc2ySwM_344.1679 Anthoceros agrestis HOM05D003993 ORTHO05D005336 1.9e-16 89.4 74 55.4
Pp3c10_1850 Physcomitrium patens HOM05D003993 ORTHO05D005336 3.2e-16 88.6 73 53.4
SMO143G0035 Selaginella moellendorffii HOM05D003993 ORTHO05D005336 7.2e-16 87.4 72 51.4
Mapoly0007s0002 Marchantia polymorpha HOM05D003993 ORTHO05D005336 1.6e-15 86.3 101 43.6
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 2.1e-15 85.9 82 45.1
Ah.06g183050 Amaranthus hybridus HOM05D003993 ORTHO05D005336 4.8e-12 74.7 49 69.4
Rhsim07G0135200 Rhododendron simsii HOM05D000810 ORTHO05D001064 1.6e-10 69.7 75 46.7
CBR_g39891 Chara braunii HOM05D003993 ORTHO05D005336 1.9e-08 62.8 55 49.1
vmacro11768 Vaccinium macrocarpon HOM05D003993 ORTHO05D005336 3.0e-06 55.5 34 70.6


User provided reference genes

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