Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8H8UTP Arachis hypogaea HOM05D006423 ORTHO05D008233 0.0e+00 1552.3 782 100.0
arahy.Tifrunner.gnm1.ann1.B7BMME Arachis hypogaea HOM05D006423 ORTHO05D008233 5.5e-142 509.2 374 76.7
arahy.Tifrunner.gnm1.ann1.WK2353 Arachis hypogaea HOM05D006423 ORTHO05D008233 4.7e-141 506.1 374 76.2
arahy.Tifrunner.gnm1.ann1.G8Z8HQ Arachis hypogaea HOM05D006423 ORTHO05D008233 1.4e-140 504.6 367 76.8
arahy.Tifrunner.gnm1.ann1.K9W603 Arachis hypogaea HOM05D006423 ORTHO05D008233 8.3e-138 495.4 366 75.7
arahy.Tifrunner.gnm1.ann1.QX3XL1 Arachis hypogaea HOM05D006423 ORTHO05D008233 3.7e-130 469.9 773 45.8
Ca_24452_v3 Cicer arietinum L. HOM05D006423 ORTHO05D008233 2.5e-110 404.1 367 62.9
VMungo1215G0185 Vigna mungo HOM05D006423 ORTHO05D008233 2.1e-109 401.0 368 63.6
LjContig00222g0011935 Lotus japonicus HOM05D006423 ORTHO05D008233 3.1e-108 397.1 366 63.9
Lalb_Chr05g0211301 Lupinus albus HOM05D006423 ORTHO05D008233 4.4e-107 393.3 369 61.2
Psat0s769g0120 Pisum sativum HOM05D006423 ORTHO05D008233 4.4e-107 393.3 368 60.9
Phvul.002G038000 Phaseolus vulgaris HOM05D006423 ORTHO05D008233 1.9e-105 387.9 368 60.6
Glyma.12G035900 Glycine max HOM05D006423 ORTHO05D008233 1.0e-103 382.1 368 60.3
Medtr5g007970 Medicago truncatula HOM05D006423 ORTHO05D008233 5.1e-103 379.8 368 60.1
arahy.Tifrunner.gnm1.ann1.5N158K Arachis hypogaea HOM05D006423 ORTHO05D008233 1.9e-102 377.9 539 47.5
Glyma.09G222400 Glycine max HOM05D006423 ORTHO05D008233 2.8e-101 374.0 370 59.5
Gohir.D02G231700 Gossypium hirsutum HOM05D006423 ORTHO05D008233 1.3e-98 365.2 362 59.1
Gorai.005G259400 Gossypium raimondii HOM05D006423 ORTHO05D008233 1.3e-98 365.2 362 59.1
Potri.019G041300 Populus trichocarpa HOM05D006423 ORTHO05D008233 4.9e-98 363.2 370 58.1
Sabra19G0051500 Salix brachista HOM05D006423 ORTHO05D008233 6.4e-98 362.8 370 58.1
ClCG09G013540 Citrullus lanatus HOM05D006423 ORTHO05D008233 1.4e-97 361.7 365 58.4
Gohir.A03G210100 Gossypium hirsutum HOM05D006423 ORTHO05D008233 3.2e-97 360.5 362 58.8
MELO3C018682.2 Cucumis melo HOM05D006423 ORTHO05D008233 2.1e-96 357.8 365 57.8
THA.LOC104798941 Tarenaya hassleriana HOM05D006423 ORTHO05D008233 2.7e-96 357.5 362 56.1
Eucgr.G00648 Eucalyptus grandis HOM05D006423 ORTHO05D008233 7.8e-96 355.9 362 57.7
CsaV3_7G006110 Cucumis sativus L. HOM05D006423 ORTHO05D008233 1.3e-95 355.1 365 58.1
Carub.0008s2271 Capsella rubella HOM05D006423 ORTHO05D008233 5.1e-95 353.2 355 56.9
Thecc.02G043600 Theobroma cacao HOM05D006423 ORTHO05D008233 5.1e-95 353.2 361 56.0
AT5G62030 Arabidopsis thaliana HOM05D006423 ORTHO05D008233 6.6e-95 352.8 355 56.9
BcaB02g09615 Brassica carinata HOM05D006423 ORTHO05D008233 8.7e-95 352.4 359 56.0
Sp2g25200 Schrenkiella parvula HOM05D006423 ORTHO05D008233 1.5e-94 351.7 357 56.3
BraA06t25814Z Brassica rapa HOM05D006423 ORTHO05D008233 1.9e-94 351.3 350 57.1
Duzib132G0113 Durio zibethinus HOM05D006423 ORTHO05D008233 1.9e-94 351.3 350 56.9
A06p28730 Brassica napus HOM05D006423 ORTHO05D008233 3.3e-94 350.5 350 57.1
COL.COLO4_17915 Corchorus olitorius HOM05D006423 ORTHO05D008233 4.3e-94 350.1 358 56.7
Manes.14G151100 Manihot esculenta HOM05D006423 ORTHO05D008233 4.3e-94 350.1 366 55.7
Rhsim11G0029000 Rhododendron simsii HOM05D006423 ORTHO05D008233 7.3e-94 349.4 367 55.3
TWI14G0718 Tripterygium wilfordii HOM05D006423 ORTHO05D008233 7.3e-94 349.4 363 56.7
C03p65030 Brassica napus HOM05D006423 ORTHO05D008233 9.6e-94 349.0 351 57.0
Dinv06913 Davidia involucrata HOM05D006423 ORTHO05D008233 1.3e-93 348.6 363 56.2
Thhalv10004160m.g Eutrema salsugineum HOM05D006423 ORTHO05D008233 1.6e-93 348.2 360 55.6
BolC3t18761H Brassica oleracea HOM05D006423 ORTHO05D008233 2.8e-93 347.4 351 56.7
CARHR275820 Cardamine hirsuta HOM05D006423 ORTHO05D008233 2.8e-93 347.4 361 55.7
FAN08G0633 Fragaria x ananassa HOM05D006423 ORTHO05D008233 2.8e-93 347.4 361 56.5
AL8G38790 Arabidopsis lyrata HOM05D006423 ORTHO05D008233 4.8e-93 346.7 359 55.2
MD04G1037900 Malus domestica HOM05D006423 ORTHO05D008233 6.2e-93 346.3 367 55.6
CSS0010106 Camellia sinensis var. sinensis HOM05D006423 ORTHO05D008233 8.1e-93 345.9 365 56.2
FvH4_5g30480 Fragaria vesca HOM05D006423 ORTHO05D008233 8.1e-93 345.9 361 56.2
FAN13G0653 Fragaria x ananassa HOM05D006423 ORTHO05D008233 8.1e-93 345.9 360 56.4
Lj8A319T61 Lonicera japonica HOM05D006423 ORTHO05D008233 8.1e-93 345.9 385 55.3
FAN18G4202 Fragaria x ananassa HOM05D006423 ORTHO05D008233 1.4e-92 345.1 362 55.8
CAN.G474.25 Capsicum annuum HOM05D006423 ORTHO05D008233 1.8e-92 344.7 365 55.9
Haze_10785 Corylus avellana HOM05D006423 ORTHO05D008233 2.4e-92 344.4 362 56.9
CSS0049051 Camellia sinensis var. sinensis HOM05D006423 ORTHO05D008233 4.0e-92 343.6 364 54.4
Ciclev10001185m.g Citrus clementina HOM05D006423 ORTHO05D008233 4.0e-92 343.6 344 56.1
Lsat_1_v5_gn_6_73261 Lactuca sativa HOM05D006423 ORTHO05D008233 6.9e-92 342.8 356 56.7
Atru.chr6.948 Acer truncatum HOM05D006423 ORTHO05D008233 1.2e-91 342.0 361 54.3
Nitab4.5_0001632g0060 Nicotiana tabacum HOM05D006423 ORTHO05D008233 1.2e-91 342.0 372 55.1
RcHm_v2.0_Chr7g0225141 Rosa chinensis HOM05D006423 ORTHO05D008233 1.5e-91 341.7 367 55.3
Nitab4.5_0002429g0030 Nicotiana tabacum HOM05D003584 ORTHO05D008233 2.6e-91 340.9 366 54.9
PGR042G0678 Punica granatum HOM05D006423 ORTHO05D008233 7.6e-91 339.3 356 53.9
Prupe.1G561000 Prunus persica HOM05D006423 ORTHO05D008233 2.2e-90 337.8 367 53.7
Peaxi162Scf00185g01125 Petunia axillaris HOM05D006423 ORTHO05D008233 2.9e-90 337.4 362 55.2
Sed0023404 Sechium edule HOM05D006423 ORTHO05D008233 2.9e-90 337.4 345 56.5
Aa31LG11G1500 Aethionema arabicum HOM05D006423 ORTHO05D008233 4.9e-90 336.7 368 53.8
Cfa005566 Carpinus fangiana HOM05D006423 ORTHO05D008233 4.9e-90 336.7 358 57.0
CiPaw.05G040800 Carya illinoinensis HOM05D006423 ORTHO05D008233 1.4e-89 335.1 360 55.3
Ah.04g162870 Amaranthus hybridus HOM05D006423 ORTHO05D008233 1.9e-89 334.7 360 55.3
vmacro00241 Vaccinium macrocarpon HOM05D006423 ORTHO05D008233 2.4e-89 334.3 357 55.2
ECA240G4319 Erigeron canadensis HOM05D006423 ORTHO05D008233 3.2e-89 334.0 377 53.3
PGSC0003DMG400016779 Solanum tuberosum HOM05D006423 ORTHO05D008233 5.4e-89 333.2 374 52.7
EL10Ac4g08897 Beta vulgaris HOM05D006423 ORTHO05D008233 9.3e-89 332.4 366 53.6
Sopen06g021720 Solanum pennellii HOM05D006423 ORTHO05D008233 2.1e-88 331.3 374 52.4
Sc20g0000910 Simmondsia chinensis HOM05D006423 ORTHO05D008233 4.6e-88 330.1 353 55.5
Cc08_g03820 Coffea canephora HOM05D006423 ORTHO05D008233 1.0e-87 328.9 360 52.2
Solyc06g066300.1 Solanum lycopersicum HOM05D006423 ORTHO05D008233 1.0e-87 328.9 368 51.6
TAR623G1045 Trochodendron aralioides HOM05D006423 ORTHO05D008233 1.0e-87 328.9 364 53.0
Aqoxy4G02654 Aquilegia oxysepala HOM05D006423 ORTHO05D008233 1.8e-87 328.2 353 54.4
MBI10_g26061_MAGBIO Magnolia biondii HOM05D006423 ORTHO05D008233 1.8e-87 328.2 349 55.0
DCAR_004588 Daucus carota HOM05D006423 ORTHO05D008233 1.5e-86 325.1 404 49.5
QL02p073223 Quercus lobata HOM05D006423 ORTHO05D008233 1.5e-86 325.1 351 55.6
Actinidia01333 Actinidia chinensis HOM05D006423 ORTHO05D008233 2.5e-86 324.3 336 55.7
Nn2g14478 Nelumbo nucifera HOM05D006423 ORTHO05D008233 2.5e-86 324.3 353 52.1
PSO170G0343 Papaver somniferum HOM05D006423 ORTHO05D008233 3.3e-86 323.9 371 50.9
PSO782G4910 Papaver somniferum HOM05D006423 ORTHO05D008233 4.8e-85 320.1 358 51.4
SHI26338 Sapria himalayana HOM05D006423 ORTHO05D008233 8.1e-85 319.3 347 54.5
CDE05G2804 Ceratophyllum demersum HOM05D006423 ORTHO05D008233 1.6e-80 305.1 352 50.3
SGA_v2.0_scaffold96G29045 Striga asiatica HOM05D006423 ORTHO05D008233 4.6e-80 303.5 353 49.3
Migut.A00614 Erythranthe guttata HOM05D006423 ORTHO05D008233 1.8e-79 301.6 351 49.9
SalBow1G0435 Salvia bowleyana HOM05D006423 ORTHO05D008233 1.8e-79 301.6 347 51.0
SalBow1G8647 Salvia bowleyana HOM05D006423 ORTHO05D008233 1.8e-79 301.6 347 51.0
unitig_748.g8133 Utricularia gibba HOM05D006423 ORTHO05D008233 3.0e-79 300.8 349 49.9
MSTRG.11901 Avicennia marina HOM05D006423 ORTHO05D008233 1.5e-78 298.5 348 48.6
HanXRQChr03g0082011 Helianthus annuus HOM05D006423 ORTHO05D008233 5.7e-78 296.6 374 50.5
arahy.Tifrunner.gnm1.ann1.Z7R28B Arachis hypogaea HOM05D006423 ORTHO05D008233 1.3e-77 295.4 215 74.0
FAN04G1985 Fragaria x ananassa HOM05D006423 ORTHO05D008233 2.8e-77 294.3 328 54.6
HPP92_012832 Vanilla planifolia HOM05D006423 ORTHO05D008233 1.0e-74 285.8 349 49.0
AagrBONN_evm.TU.Sc2ySwM_344.2159 Anthoceros agrestis HOM05D006423 ORTHO05D008233 1.2e-72 278.9 376 46.8
SMO165G0082 Selaginella moellendorffii HOM05D006423 ORTHO05D008233 3.5e-72 277.3 346 45.7
SEGI_34782 Sequoiadendron giganteum HOM05D006423 ORTHO05D008233 1.0e-71 275.8 373 45.6
Os02g0815600 Oryza sativa ssp. japonica HOM05D006423 ORTHO05D008233 3.3e-70 270.8 372 43.5
Zm00001eb258780 Zea mays HOM05D006423 ORTHO05D008233 3.1e-68 264.2 348 43.4
CBR_g39210 Chara braunii HOM05D006423 ORTHO05D008233 5.3e-68 263.5 313 46.3
Pp3c15_23540 Physcomitrium patens HOM05D006423 ORTHO05D008233 2.5e-65 254.6 364 44.2
Mapoly0002s0072 Marchantia polymorpha HOM05D006423 ORTHO05D008233 3.0e-63 247.7 384 42.7
AUR62004741 Chenopodium quinoa HOM05D006423 ORTHO05D008233 3.7e-61 240.7 368 42.9
ATR0564G315 Amborella trichopoda HOM05D006423 ORTHO05D008233 1.1e-60 239.2 353 43.6
AUR62037510 Chenopodium quinoa HOM05D006423 ORTHO05D008233 1.5e-59 235.3 322 46.6
Cre09.g408500 Chlamydomonas reinhardtii HOM05D006423 ORTHO05D008233 2.0e-59 235.0 345 41.7
PRCOL_00005581 Prasinoderma coloniale HOM05D006423 ORTHO05D008233 1.3e-58 232.3 399 39.1
arahy.Tifrunner.gnm1.ann1.VBI12C Arachis hypogaea HOM05D006423 ORTHO05D008233 3.6e-56 224.2 158 77.8
arahy.Tifrunner.gnm1.ann1.F1VCW7 Arachis hypogaea HOM05D006423 ORTHO05D008233 1.1e-52 212.6 177 65.0
RcHm_v2.0_Chr7g0225101 Rosa chinensis HOM05D006423 ORTHO05D008233 3.7e-45 187.6 164 64.0
GSVIVG01005261001 Vitis vinifera HOM05D006423 ORTHO05D008233 8.5e-42 176.4 339 38.9
arahy.Tifrunner.gnm1.ann1.X0DKS7 Arachis hypogaea HOM05D006423 ORTHO05D008233 1.5e-41 175.6 133 70.7
TAR622G0998 Trochodendron aralioides HOM05D006423 ORTHO05D008233 9.4e-41 172.9 200 53.0
Haze_26324 Corylus avellana HOM05D006423 ORTHO05D008233 3.5e-35 154.5 266 36.1
Actinidia29280 Actinidia chinensis HOM05D006423 ORTHO05D008233 6.4e-21 107.1 324 30.9
Atru.chr6.949 Acer truncatum HOM05D006423 ORTHO05D008233 1.1e-17 96.3 106 49.1
AUR62027084 Chenopodium quinoa HOM05D005578 ORTHO05D006969 1.2e-06 59.7 101 31.7
AUR62030923 Chenopodium quinoa HOM05D005578 ORTHO05D006969 1.2e-06 59.7 101 30.7
Rhsim09G0010700 Rhododendron simsii HOM05D005578 ORTHO05D006969 2.6e-06 58.5 109 31.2
Eucgr.A00019 Eucalyptus grandis HOM05D005578 ORTHO05D006969 3.4e-06 58.2 101 32.7
Manes.04G036900 Manihot esculenta HOM05D005578 ORTHO05D006969 4.4e-06 57.8 109 32.1
Hma1.2p1_0150F.1_g066670 Hydrangea macrophylla HOM05D005578 ORTHO05D006969 5.8e-06 57.4 101 30.7
Ciclev10020255m.g Citrus clementina HOM05D005578 ORTHO05D006969 7.5e-06 57.0 352 19.9
MD04G1048400 Malus domestica HOM05D005578 ORTHO05D006969 7.5e-06 57.0 310 22.9


User provided reference genes

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