Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 2.3e-61 238.8 129 100.0
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 1.1e-58 229.9 128 97.7
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 5.5e-55 217.6 128 89.1
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 3.6e-54 214.9 128 87.5
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 7.9e-54 213.8 129 86.8
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 1.0e-53 213.4 128 87.5
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 2.3e-53 212.2 128 85.9
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 3.0e-53 211.8 129 86.0
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 5.2e-53 211.1 128 86.7
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 8.8e-53 210.3 129 85.3
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 2.8e-51 205.3 129 82.9
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 6.3e-51 204.1 128 84.4
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 1.4e-50 203.0 128 82.0
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.4e-50 203.0 129 82.9
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.8e-50 202.6 121 87.6
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 1.8e-50 202.6 128 83.6
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 2.4e-50 202.2 128 81.2
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 2.4e-50 202.2 129 82.2
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 4.1e-50 201.4 128 82.0
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 9.1e-50 200.3 128 82.8
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 1.6e-49 199.5 129 82.2
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 1.6e-49 199.5 126 82.5
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 1.6e-49 199.5 126 82.5
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 1.6e-49 199.5 129 80.6
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 2.0e-49 199.1 129 81.4
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 2.0e-49 199.1 128 82.0
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 2.0e-49 199.1 128 82.0
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 2.6e-49 198.7 128 79.7
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 2.6e-49 198.7 128 79.7
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 2.6e-49 198.7 129 82.9
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 3.5e-49 198.4 129 81.4
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 5.9e-49 197.6 128 79.7
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 1.0e-48 196.8 128 78.1
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 1.0e-48 196.8 128 80.5
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.0e-48 196.8 128 79.7
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.3e-48 196.4 129 80.6
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 1.3e-48 196.4 131 80.9
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 77.3
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.7e-48 196.1 122 83.6
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 80.5
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 79.7
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 78.9
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 2.2e-48 195.7 129 79.1
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 2.2e-48 195.7 128 79.7
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 5.0e-48 194.5 127 79.5
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 5.0e-48 194.5 128 79.7
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 1.1e-47 193.4 129 78.3
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 1.1e-47 193.4 129 79.1
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 1.1e-47 193.4 126 81.0
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 1.1e-47 193.4 129 77.5
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.5e-47 193.0 129 79.1
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.5e-47 193.0 129 79.1
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 1.9e-47 192.6 128 78.1
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 2.5e-47 192.2 129 76.7
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 3.2e-47 191.8 128 78.1
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 5.5e-47 191.0 128 77.3
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 7.2e-47 190.7 128 78.9
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 9.4e-47 190.3 128 78.1
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.7e-46 188.7 128 75.8
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 3.6e-46 188.3 128 75.0
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 1.0e-45 186.8 119 81.5
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 1.0e-45 186.8 128 79.7
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.4e-45 186.4 128 75.0
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 2.3e-45 185.7 128 75.0
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 2.3e-45 185.7 128 75.8
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.3e-45 185.7 127 74.8
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 3.0e-45 185.3 125 76.8
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 3.0e-45 185.3 128 75.0
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 3.0e-45 185.3 128 75.8
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 3.0e-45 185.3 126 77.0
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 4.0e-45 184.9 128 75.0
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 5.2e-45 184.5 129 73.6
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 6.7e-45 184.1 126 74.6
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 6.7e-45 184.1 135 74.8
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 6.7e-45 184.1 125 75.2
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 8.8e-45 183.7 128 71.1
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 3.3e-44 181.8 121 81.8
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 9.7e-44 180.3 128 73.4
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.1e-42 176.8 125 74.4
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 3.1e-42 175.3 129 73.6
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 4.1e-42 174.9 128 71.9
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 9.1e-42 173.7 119 77.3
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 9.1e-42 173.7 129 74.4
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 9.1e-42 173.7 130 71.5
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 9.1e-42 173.7 104 87.5
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 1.2e-41 173.3 113 81.4
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 2.0e-41 172.6 129 76.0
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 7.7e-41 170.6 137 67.9
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 2.2e-40 169.1 172 58.1
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 2.2e-40 169.1 120 75.8
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 1.5e-39 166.4 129 70.5
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 1.5e-39 166.4 129 71.3
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 1.5e-39 166.4 129 70.5
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 6.1e-38 161.0 125 72.8
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 5.7e-36 154.5 104 79.8
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 4.1e-34 148.3 128 58.6
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 5.4e-34 147.9 116 69.8
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 7.0e-34 147.5 186 50.5
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.0e-32 143.7 104 72.1
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 2.3e-32 142.5 99 73.7
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 2.3e-32 142.5 128 55.5
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 4.2e-31 138.3 96 74.0
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 2.1e-30 136.0 101 74.3
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 3.0e-29 132.1 92 76.1
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 9.2e-26 120.6 120 50.8
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 2.0e-25 119.4 92 69.6
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 1.1e-23 113.6 92 68.5
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 1.5e-23 113.2 99 53.5
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 3.3e-23 112.1 70 80.0
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 4.3e-23 111.7 110 60.0
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 2.8e-22 109.0 92 66.3
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 1.4e-21 106.7 93 64.5
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 5.7e-20 101.3 63 76.2
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 2.9e-19 99.0 62 80.6
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 1.1e-18 97.1 62 79.0
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 7.0e-18 94.4 62 75.8
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.6e-17 93.2 66 74.2
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 2.3e-16 89.4 62 71.0
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 3.9e-16 88.6 65 72.3
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 1.5e-15 86.7 64 70.3
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 1.5e-15 86.7 55 83.6
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 1.7e-11 73.2 117 32.5
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 4.1e-10 68.6 115 33.0
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 9.2e-10 67.4 40 85.0
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 1.3e-08 63.5 61 47.5
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 3.9e-08 62.0 37 81.1


User provided reference genes

Program Settings