Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8FT8UW Arachis hypogaea HOM05D003898 ORTHO05D000721 1.0e-82 310.1 160 100.0
arahy.Tifrunner.gnm1.ann1.JWT6XR Arachis hypogaea HOM05D003898 ORTHO05D004642 3.2e-28 129.0 160 53.8
arahy.Tifrunner.gnm1.ann1.U326PE Arachis hypogaea HOM05D001128 ORTHO05D000721 1.0e-26 124.0 72 86.1
arahy.Tifrunner.gnm1.ann1.1NAQ44 Arachis hypogaea HOM05D001128 ORTHO05D000721 2.1e-24 116.3 72 81.9
arahy.Tifrunner.gnm1.ann1.K1QIEY Arachis hypogaea HOM05D003898 ORTHO05D004642 1.0e-18 97.4 51 92.2
Psat5g107440 Pisum sativum HOM05D003898 ORTHO05D004642 2.7e-11 72.8 49 73.5
Ca_02530_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 3.3e-09 65.9 50 62.0
TPR.G26798 Trifolium pratense HOM05D003898 ORTHO05D004642 2.2e-08 63.2 49 65.3
Lj1g0002951 Lotus japonicus HOM05D003898 ORTHO05D004642 8.2e-08 61.2 46 63.0
Prupe.1G507900 Prunus persica HOM05D003898 ORTHO05D004642 2.4e-07 59.7 50 54.0
TAR625G0437 Trochodendron aralioides HOM05D003898 ORTHO05D004642 3.1e-07 59.3 50 54.0
Dinv44720 Davidia involucrata HOM05D003898 ORTHO05D004642 4.1e-07 58.9 94 40.4
Glyma.04G254600 Glycine max HOM05D003898 ORTHO05D004642 5.3e-07 58.5 46 60.9
QL12p035494 Quercus lobata HOM05D003898 ORTHO05D004642 6.9e-07 58.2 50 54.0
CiPaw.06G023700 Carya illinoinensis HOM05D003898 ORTHO05D004642 9.0e-07 57.8 50 52.0
ClCG08G010840 Citrullus lanatus HOM05D003898 ORTHO05D004642 9.0e-07 57.8 51 51.0
Medtr4g112080 Medicago truncatula HOM05D003898 ORTHO05D004642 1.2e-06 57.4 43 62.8
Phvul.009G026700 Phaseolus vulgaris HOM05D003898 ORTHO05D004642 1.5e-06 57.0 49 57.1
ClCG08G002640 Citrullus lanatus HOM05D003898 ORTHO05D004642 2.0e-06 56.6 51 51.0
Lalb_Chr11g0065591 Lupinus albus HOM05D003898 ORTHO05D004642 2.6e-06 56.2 46 67.4
Medtr3g073550 Medicago truncatula HOM05D003898 ORTHO05D004642 2.6e-06 56.2 48 60.4
FAN13G1941 Fragaria x ananassa HOM05D003898 ORTHO05D004642 7.7e-06 54.7 50 48.0
VMungo1309G1855 Vigna mungo HOM05D003898 ORTHO05D004642 7.7e-06 54.7 49 55.1
Lalb_Chr08g0241771 Lupinus albus HOM05D003898 ORTHO05D004642 1.0e-05 54.3 49 59.2
Potri.002G090500 Populus trichocarpa HOM05D003898 ORTHO05D004642 1.0e-05 54.3 51 52.9
RcHm_v2.0_Chr1g0340891 Rosa chinensis HOM05D003898 ORTHO05D004642 1.0e-05 54.3 50 46.0


User provided reference genes

Program Settings