Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8FQY9T Arachis hypogaea HOM05D003837 ORTHO05D004751 5.2e-156 554.3 273 100.0
arahy.Tifrunner.gnm1.ann1.LGM3J9 Arachis hypogaea HOM05D003837 ORTHO05D004751 1.7e-154 549.3 273 98.9
arahy.Tifrunner.gnm1.ann1.50MGD9 Arachis hypogaea HOM05D003837 ORTHO05D004751 6.4e-154 547.4 273 98.9
arahy.Tifrunner.gnm1.ann1.MHF7VE Arachis hypogaea HOM05D003837 ORTHO05D004751 4.6e-152 541.2 273 97.8
arahy.Tifrunner.gnm1.ann1.AX1MHW Arachis hypogaea HOM05D003837 ORTHO05D004751 1.7e-146 522.7 273 95.2
Glyma.18G234200 Glycine max HOM05D003837 ORTHO05D004751 5.1e-143 511.1 269 91.4
Phvul.008G061600 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 2.4e-140 502.3 269 89.6
Medtr7g077870 Medicago truncatula HOM05D003837 ORTHO05D004751 7.6e-139 497.3 269 88.8
Psat3g107800 Pisum sativum HOM05D003837 ORTHO05D004751 1.3e-138 496.5 269 88.8
Thecc.01G357600 Theobroma cacao HOM05D003837 ORTHO05D004751 4.9e-138 494.6 269 87.7
Duzib138G0194 Durio zibethinus HOM05D003837 ORTHO05D004751 1.4e-137 493.0 269 87.7
Ca_07930_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 1.9e-137 492.7 281 85.1
QL04p053649 Quercus lobata HOM05D003837 ORTHO05D004751 3.2e-137 491.9 268 86.9
Gohir.A08G032500 Gossypium hirsutum HOM05D003837 ORTHO05D004751 1.3e-135 486.5 269 86.2
Gorai.004G042000 Gossypium raimondii HOM05D003837 ORTHO05D004751 1.3e-135 486.5 269 86.2
Gohir.D08G043400 Gossypium hirsutum HOM05D003837 ORTHO05D004751 2.3e-135 485.7 269 85.9
arahy.Tifrunner.gnm1.ann1.I86G4G Arachis hypogaea HOM05D003837 ORTHO05D004751 3.9e-135 485.0 244 98.0
CiPaw.01G063000 Carya illinoinensis HOM05D003837 ORTHO05D004751 5.1e-135 484.6 269 85.9
Hma1.2p1_0780F.1_g216730 Hydrangea macrophylla HOM05D003837 ORTHO05D004751 6.7e-135 484.2 267 86.1
Cc02_g38180 Coffea canephora HOM05D003837 ORTHO05D004751 1.9e-134 482.6 269 85.5
Dinv43830 Davidia involucrata HOM05D003837 ORTHO05D004751 2.5e-134 482.3 269 85.5
CANSAT56G1308 Cannabis sativa HOM05D003837 ORTHO05D004751 5.6e-134 481.1 269 85.5
EL10Ac1g00400 Beta vulgaris HOM05D003837 ORTHO05D004751 9.6e-134 480.3 274 86.1
Nitab4.5_0002811g0010 Nicotiana tabacum HOM05D003837 ORTHO05D004751 9.6e-134 480.3 269 85.1
GSVIVG01026949001 Vitis vinifera HOM05D003837 ORTHO05D004751 1.3e-133 479.9 269 86.2
Atru.chr5.511 Acer truncatum HOM05D003837 ORTHO05D004751 1.6e-133 479.6 269 84.4
AUR62022582 Chenopodium quinoa HOM05D003837 ORTHO05D004751 1.6e-133 479.6 271 86.0
AUR62004375 Chenopodium quinoa HOM05D003837 ORTHO05D004751 2.1e-133 479.2 271 85.2
PGR042G3540 Punica granatum HOM05D003837 ORTHO05D004751 2.1e-133 479.2 270 84.8
Nitab4.5_0000386g0040 Nicotiana tabacum HOM05D003837 ORTHO05D004751 3.7e-133 478.4 269 85.1
Oeu010619.1 Olea europaea HOM05D003837 ORTHO05D004751 3.7e-133 478.4 269 84.8
MSTRG.17276 Avicennia marina HOM05D003837 ORTHO05D004751 6.2e-133 477.6 270 83.0
Solyc10g012410.3 Solanum lycopersicum HOM05D003837 ORTHO05D004751 1.1e-132 476.9 269 85.1
Sopen10g006240 Solanum pennellii HOM05D003837 ORTHO05D004751 1.4e-132 476.5 269 84.8
Ah.05g180500 Amaranthus hybridus HOM05D003837 ORTHO05D004751 1.8e-132 476.1 271 83.4
Eucgr.E01551 Eucalyptus grandis HOM05D003837 ORTHO05D004751 4.0e-132 474.9 269 83.3
Rhsim01G0163300 Rhododendron simsii HOM05D003837 ORTHO05D004751 4.0e-132 474.9 269 83.6
PGSC0003DMG400006508 Solanum tuberosum HOM05D003837 ORTHO05D004751 4.0e-132 474.9 269 84.0
MELO3C021202.2 Cucumis melo HOM05D003837 ORTHO05D004751 6.9e-132 474.2 270 84.8
Lalb_Chr04g0253801 Lupinus albus HOM05D003837 ORTHO05D004751 6.9e-132 474.2 268 84.0
Potri.014G086100 Populus trichocarpa HOM05D003837 ORTHO05D004751 9.0e-132 473.8 269 83.6
Sed0000473 Sechium edule HOM05D003837 ORTHO05D004751 2.0e-131 472.6 269 83.6
TAR629G3438 Trochodendron aralioides HOM05D003837 ORTHO05D004751 2.0e-131 472.6 269 83.3
AL4G45220 Arabidopsis lyrata HOM05D003837 ORTHO05D004751 2.6e-131 472.2 269 82.5
ECA236G1077 Erigeron canadensis HOM05D003837 ORTHO05D004751 2.6e-131 472.2 269 82.5
Lj9A584G62 Lonicera japonica HOM05D003837 ORTHO05D004751 2.6e-131 472.2 268 84.3
MBI18_g02839_MAGBIO Magnolia biondii HOM05D003837 ORTHO05D004751 4.5e-131 471.5 269 82.9
Sp4g28060 Schrenkiella parvula HOM05D003837 ORTHO05D004751 4.5e-131 471.5 269 82.2
Lsat_1_v5_gn_7_4380 Lactuca sativa HOM05D003837 ORTHO05D004751 1.0e-130 470.3 266 83.5
Lj1g0003798 Lotus japonicus HOM05D003837 ORTHO05D004751 1.0e-130 470.3 270 83.7
Rhsim01G0190400 Rhododendron simsii HOM05D003837 ORTHO05D004751 1.0e-130 470.3 269 82.9
CAN.G116.14 Capsicum annuum HOM05D003837 ORTHO05D004751 1.3e-130 469.9 269 84.0
Manes.01G255600 Manihot esculenta HOM05D003837 ORTHO05D004751 1.3e-130 469.9 263 84.4
SalBow3G2595 Salvia bowleyana HOM05D003837 ORTHO05D004751 1.3e-130 469.9 270 82.6
Glyma.18G234300 Glycine max HOM05D003837 ORTHO05D004751 1.7e-130 469.5 270 83.0
MD01G1065200 Malus domestica HOM05D003837 ORTHO05D004751 2.2e-130 469.2 269 81.8
TPR.G37852 Trifolium pratense HOM05D003837 ORTHO05D004751 2.2e-130 469.2 269 82.2
Thhalv10001586m.g Eutrema salsugineum HOM05D003837 ORTHO05D004751 2.9e-130 468.8 269 81.0
Lalb_Chr10g0095951 Lupinus albus HOM05D003837 ORTHO05D004751 2.9e-130 468.8 267 83.1
Sabra14G0062400 Salix brachista HOM05D003837 ORTHO05D004751 2.9e-130 468.8 269 82.5
Haze_15524 Corylus avellana HOM05D003837 ORTHO05D004751 3.8e-130 468.4 307 76.9
VMungo1383G2611 Vigna mungo HOM05D003837 ORTHO05D004751 6.5e-130 467.6 268 84.0
AT2G45990 Arabidopsis thaliana HOM05D003837 ORTHO05D004751 8.4e-130 467.2 269 81.8
FAN10G2900 Fragaria x ananassa HOM05D003837 ORTHO05D004751 8.4e-130 467.2 269 81.4
RcHm_v2.0_Chr1g0356141 Rosa chinensis HOM05D003837 ORTHO05D004751 1.4e-129 466.5 269 81.8
FvH4_7g14620 Fragaria vesca HOM05D003837 ORTHO05D004751 1.9e-129 466.1 269 81.4
FAN06G1674 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.9e-129 466.1 269 81.4
Migut.B01769 Erythranthe guttata HOM05D003837 ORTHO05D004751 2.5e-129 465.7 269 81.8
TPR.G37767 Trifolium pratense HOM05D003837 ORTHO05D004751 2.5e-129 465.7 269 84.4
Carub.0004s2869 Capsella rubella HOM05D003837 ORTHO05D004751 3.2e-129 465.3 269 81.0
Medtr7g077880 Medicago truncatula HOM05D003837 ORTHO05D004751 4.2e-129 464.9 269 81.0
arahy.Tifrunner.gnm1.ann1.1HB2SZ Arachis hypogaea HOM05D003837 ORTHO05D004751 7.1e-129 464.2 269 80.3
Psat3g107760 Pisum sativum HOM05D003837 ORTHO05D004751 1.6e-128 463.0 269 81.4
FAN01G2145 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.1e-128 462.6 269 80.7
vmacro21886 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 2.1e-128 462.6 269 81.8
vmacro23130 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 2.1e-128 462.6 269 81.8
arahy.Tifrunner.gnm1.ann1.SJDP6S Arachis hypogaea HOM05D003837 ORTHO05D004751 2.7e-128 462.2 269 80.3
FAN10G2259 Fragaria x ananassa HOM05D003837 ORTHO05D004751 6.0e-128 461.1 275 79.6
unitig_61.g26385 Utricularia gibba HOM05D003837 ORTHO05D004751 6.0e-128 461.1 271 80.4
FAN03G2321 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.0e-127 460.3 275 79.6
FAN06G4414 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.8e-127 459.5 275 79.6
BcaC02g12159 Brassica carinata HOM05D003837 ORTHO05D004751 2.3e-127 459.1 270 80.7
Aa31LG1G27400 Aethionema arabicum HOM05D003837 ORTHO05D004751 3.9e-127 458.4 269 79.6
CARHR141260 Cardamine hirsuta HOM05D003837 ORTHO05D004751 5.1e-127 458.0 269 79.6
BraA05t19561Z Brassica rapa HOM05D003837 ORTHO05D004751 6.7e-127 457.6 270 80.4
Migut.B01768 Erythranthe guttata HOM05D003837 ORTHO05D004751 8.7e-127 457.2 271 81.2
CANSAT56G2444 Cannabis sativa HOM05D003837 ORTHO05D004751 1.9e-126 456.1 269 81.8
A05p05980 Brassica napus HOM05D003837 ORTHO05D004751 4.3e-126 454.9 270 80.0
VMungo1383G0868 Vigna mungo HOM05D003837 ORTHO05D004751 7.4e-126 454.1 265 83.4
Ciclev10021689m.g Citrus clementina HOM05D003837 ORTHO05D004751 9.7e-126 453.8 269 79.6
C04p06910 Brassica napus HOM05D003837 ORTHO05D004751 2.8e-125 452.2 270 79.6
Phvul.008G061500 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 2.8e-125 452.2 267 82.0
FAN01G0904 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.7e-125 451.8 269 79.6
arahy.Tifrunner.gnm1.ann1.438NR4 Arachis hypogaea HOM05D003837 ORTHO05D004751 1.8e-124 449.5 272 85.7
Ca_07931_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 4.1e-124 448.4 269 78.1
PSO017G1131 Papaver somniferum HOM05D003837 ORTHO05D004751 1.2e-123 446.8 269 76.6
Ciclev10021690m.g Citrus clementina HOM05D003837 ORTHO05D004751 7.7e-123 444.1 269 79.2
Prupe.2G172200 Prunus persica HOM05D003837 ORTHO05D004751 7.7e-123 444.1 269 79.6
BolC4t22312H Brassica oleracea HOM05D003837 ORTHO05D004751 3.8e-122 441.8 286 75.2
DCAR_025196 Daucus carota HOM05D003837 ORTHO05D004751 1.4e-121 439.9 269 78.4
Cfa003906 Carpinus fangiana HOM05D003837 ORTHO05D004751 2.5e-121 439.1 252 84.9
THA.LOC104802037 Tarenaya hassleriana HOM05D003837 ORTHO05D004751 1.2e-120 436.8 269 78.8
Actinidia02836 Actinidia chinensis HOM05D003837 ORTHO05D004751 2.7e-120 435.6 275 78.2
Cpa.g.sc11.20 Carica papaya HOM05D003837 ORTHO05D004751 2.7e-120 435.6 272 77.9
ClCG06G003610 Citrullus lanatus HOM05D003837 ORTHO05D004751 4.6e-120 434.9 269 78.4
PSO063G2236 Papaver somniferum HOM05D003837 ORTHO05D004751 7.9e-120 434.1 261 76.6
CsaV3_6G000640 Cucumis sativus L. HOM05D003837 ORTHO05D004751 1.0e-119 433.7 269 78.8
FvH4_7g14540 Fragaria vesca HOM05D003837 ORTHO05D004751 1.0e-119 433.7 269 77.7
HPP92_025965 Vanilla planifolia HOM05D003837 ORTHO05D004751 1.0e-119 433.7 269 75.8
Zm00001eb094870 Zea mays HOM05D003837 ORTHO05D004751 2.3e-119 432.6 268 74.3
Os07g0418000 Oryza sativa ssp. japonica HOM05D003837 ORTHO05D004751 8.8e-119 430.6 268 74.3
TWI14G0320 Tripterygium wilfordii HOM05D003837 ORTHO05D004751 4.3e-118 428.3 269 77.0
COL.COLO4_12726 Corchorus olitorius HOM05D003837 ORTHO05D004751 9.7e-118 427.2 269 79.2
Hund27264 Selenicereus undatus HOM05D003837 ORTHO05D004751 2.2e-117 426.0 269 75.5
SEGI_21942 Sequoiadendron giganteum HOM05D003837 ORTHO05D004751 1.1e-116 423.7 269 72.1
RcHm_v2.0_Chr1g0356101 Rosa chinensis HOM05D003837 ORTHO05D004751 1.8e-116 422.9 269 75.5
FAN06G3658 Fragaria x ananassa HOM05D003837 ORTHO05D004751 6.9e-116 421.0 269 75.8
HanXRQChr04g0121181 Helianthus annuus HOM05D003837 ORTHO05D004751 9.1e-116 420.6 269 74.3
CDE05G2325 Ceratophyllum demersum HOM05D003837 ORTHO05D004751 2.6e-115 419.1 266 74.4
Ca_07932_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 2.2e-114 416.0 269 74.7
Lj1g0022323 Lotus japonicus HOM05D003837 ORTHO05D004751 2.9e-114 415.6 237 85.7
FAN06G0309 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.5e-113 412.5 269 74.3
FAN16G2327 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.2e-112 410.2 274 70.8
Peaxi162Scf00008g02421 Petunia axillaris HOM05D003837 ORTHO05D004751 1.6e-112 409.8 269 76.2
Nn1g01565 Nelumbo nucifera HOM05D003837 ORTHO05D004751 3.6e-112 408.7 269 74.0
SMO118G0280 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 4.7e-112 408.3 272 71.0
FvH4_3g44250 Fragaria vesca HOM05D003837 ORTHO05D004751 6.1e-112 407.9 274 70.4
FAN06G3536 Fragaria x ananassa HOM05D003837 ORTHO05D004751 7.9e-112 407.5 279 69.2
FAN10G0266 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.8e-111 406.4 273 70.7
FAN11G2601 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.3e-111 406.0 274 70.1
FAN10G3579 Fragaria x ananassa HOM05D003837 ORTHO05D004751 5.1e-111 404.8 273 70.3
FAN01G2925 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.5e-110 403.3 279 69.2
ATR0680G377 Amborella trichopoda HOM05D003837 ORTHO05D004751 7.4e-110 401.0 235 79.6
Pp3c11_2170 Physcomitrium patens HOM05D003837 ORTHO05D004751 1.7e-109 399.8 270 69.3
FAN06G3952 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.7e-109 398.7 276 69.2
Pp3c23_10590 Physcomitrium patens HOM05D003837 ORTHO05D004751 1.1e-108 397.1 271 69.7
AagrBONN_evm.TU.Sc2ySwM_228.2910 Anthoceros agrestis HOM05D003837 ORTHO05D004751 1.4e-108 396.7 270 68.9
HanXRQChr04g0121171 Helianthus annuus HOM05D003837 ORTHO05D004751 5.3e-108 394.8 269 69.9
AagrBONN_evm.TU.Sc2ySwM_228.5133 Anthoceros agrestis HOM05D003837 ORTHO05D004751 7.7e-107 391.0 269 67.7
Mapoly0002s0196 Marchantia polymorpha HOM05D003837 ORTHO05D004751 3.2e-105 385.6 270 66.7
Atru.chr5.512 Acer truncatum HOM05D003837 ORTHO05D004751 1.6e-104 383.3 212 84.9
RcHm_v2.0_Chr1g0356011 Rosa chinensis HOM05D003837 ORTHO05D004751 8.0e-104 380.9 270 66.7
RcHm_v2.0_Chr1g0356051 Rosa chinensis HOM05D003837 ORTHO05D004751 1.0e-103 380.6 271 67.9
RcHm_v2.0_Chr1g0356041 Rosa chinensis HOM05D003837 ORTHO05D004751 3.3e-102 375.6 270 65.9
RcHm_v2.0_Chr1g0355961 Rosa chinensis HOM05D003837 ORTHO05D004751 3.7e-101 372.1 271 66.4
Glyma.09G258500 Glycine max HOM05D003837 ORTHO05D004751 4.1e-100 368.6 214 86.4
Pp3c24_7060 Physcomitrium patens HOM05D003837 ORTHO05D004751 6.5e-98 361.3 249 67.9
AUR62004376 Chenopodium quinoa HOM05D003837 ORTHO05D004751 2.1e-96 356.3 211 81.5
Actinidia02835 Actinidia chinensis HOM05D003837 ORTHO05D004751 2.8e-93 345.9 197 84.3
CBR_g30756 Chara braunii HOM05D003837 ORTHO05D004751 9.1e-92 340.9 295 57.6
Sc26g0000870 Simmondsia chinensis HOM05D003837 ORTHO05D004751 5.0e-90 335.1 187 83.4
FAN10G2608 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.6e-86 322.8 189 78.3
SMO118G0457 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 1.9e-81 306.6 269 56.1
CSS0003015 Camellia sinensis var. sinensis HOM05D003837 ORTHO05D004751 4.4e-62 242.3 189 63.5
FvH4_7g14570 Fragaria vesca HOM05D003837 ORTHO05D004751 4.1e-60 235.7 143 79.0
vmacro20932 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 4.3e-57 225.7 181 64.1
FAN10G2382 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.1e-56 223.4 133 75.9
Cre06.g278117 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 2.8e-56 223.0 272 43.0
Glyma.09G258400 Glycine max HOM05D003837 ORTHO05D004751 4.7e-56 222.2 128 80.5
RcHm_v2.0_Chr1g0356441 Rosa chinensis HOM05D003837 ORTHO05D004751 3.7e-53 212.6 188 61.7
MCO05G263 Micromonas commoda HOM05D003837 ORTHO05D004751 3.0e-50 203.0 267 41.6
SGA_v2.0_scaffold95G28830 Striga asiatica HOM05D003837 ORTHO05D004751 6.4e-45 185.3 269 42.0
Cre13.g578900 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 3.4e-38 162.9 278 35.3
arahy.Tifrunner.gnm1.ann1.B43A3C Arachis hypogaea HOM05D003837 ORTHO05D004751 2.2e-37 160.2 129 65.9
Glyma.04G165300 Glycine max HOM05D003837 ORTHO05D004751 2.4e-36 156.8 109 74.3
FvH4_7g14571 Fragaria vesca HOM05D003837 ORTHO05D004751 1.9e-33 147.1 88 76.1
MD09G1245400 Malus domestica HOM05D003837 ORTHO05D004751 2.8e-32 143.3 82 80.5
MD09G1245300 Malus domestica HOM05D003837 ORTHO05D004751 1.5e-30 137.5 77 81.8
arahy.Tifrunner.gnm1.ann1.DBMD67 Arachis hypogaea HOM05D003837 ORTHO05D004751 3.2e-28 129.8 68 89.7
RcHm_v2.0_Chr1g0356021 Rosa chinensis HOM05D003837 ORTHO05D004751 1.8e-23 114.0 108 54.6
Actinidia37295 Actinidia chinensis HOM05D003837 ORTHO05D004751 1.2e-22 111.3 69 75.4
Ciclev10006592m.g Citrus clementina HOM05D003837 ORTHO05D033091 2.2e-21 107.1 67 67.2
Ciclev10013186m.g Citrus clementina HOM05D003837 ORTHO05D004751 5.7e-17 92.4 82 56.1
AUR62043290 Chenopodium quinoa HOM05D008055 ORTHO05D009927 7.6e-14 82.0 60 63.3
A06p08350 Brassica napus HOM05D003837 ORTHO05D099682 1.3e-13 81.3 65 61.5
A05p05950 Brassica napus HOM05D003837 ORTHO05D033091 2.9e-13 80.1 49 73.5
BraA05t19558Z Brassica rapa HOM05D003837 ORTHO05D033091 2.9e-13 80.1 49 73.5
BolC7t40474H Brassica oleracea HOM05D003837 ORTHO05D033622 1.2e-11 74.7 57 64.9
BolC9t54120H Brassica oleracea HOM05D003837 ORTHO05D033622 2.1e-11 73.9 57 64.9
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 2.2e-08 63.9 44 63.6
C09p56440 Brassica napus HOM05D003837 ORTHO05D101394 3.7e-08 63.2 50 64.0


User provided reference genes

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