Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 1.4e-62 242.7 114 100.0
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 6.4e-55 217.2 109 96.3
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 3.5e-53 211.5 108 86.1
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 6.6e-52 207.2 110 84.5
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 1.1e-51 206.5 107 85.0
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 7.3e-51 203.8 110 84.5
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 6.2e-50 200.7 110 79.1
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 8.0e-50 200.3 111 81.1
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 1.0e-49 199.9 111 82.0
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 3.1e-49 198.4 104 82.7
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 5.2e-49 197.6 107 80.4
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 6.8e-49 197.2 107 79.4
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 5.8e-48 194.1 105 80.0
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 9.8e-48 193.4 106 78.3
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 9.8e-48 193.4 106 78.3
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 9.8e-48 193.4 107 76.6
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 1.3e-47 193.0 105 79.0
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 2.2e-47 192.2 107 78.5
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 2.9e-47 191.8 105 79.0
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 2.9e-47 191.8 107 78.5
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 2.9e-47 191.8 107 78.5
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 3.7e-47 191.4 107 76.6
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 3.7e-47 191.4 107 76.6
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 1.1e-46 189.9 103 80.6
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.4e-46 189.5 105 77.1
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 1.4e-46 189.5 107 77.6
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 1.4e-46 189.5 105 79.0
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 1.9e-46 189.1 107 75.7
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 4.1e-46 188.0 107 76.6
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 4.1e-46 188.0 111 73.9
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 4.1e-46 188.0 104 77.9
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 5.4e-46 187.6 101 79.2
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 5.4e-46 187.6 106 74.5
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 5.4e-46 187.6 107 73.8
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 9.2e-46 186.8 106 74.5
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 9.2e-46 186.8 103 78.6
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 9.2e-46 186.8 103 78.6
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 9.2e-46 186.8 107 75.7
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 1.2e-45 186.4 105 77.1
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 1.2e-45 186.4 107 74.8
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.2e-45 186.4 106 75.5
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.6e-45 186.0 105 76.2
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 1.6e-45 186.0 105 75.2
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 1.6e-45 186.0 104 76.9
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 2.0e-45 185.7 105 75.2
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 2.0e-45 185.7 105 75.2
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 2.0e-45 185.7 105 76.2
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 2.7e-45 185.3 105 74.3
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 2.7e-45 185.3 108 73.1
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 2.7e-45 185.3 103 77.7
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 4.6e-45 184.5 107 75.7
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 4.6e-45 184.5 110 71.8
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 7.8e-45 183.7 103 77.7
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 7.8e-45 183.7 107 73.8
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 7.8e-45 183.7 107 73.8
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 7.8e-45 183.7 107 75.7
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 1.0e-44 183.3 105 75.2
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 1.0e-44 183.3 106 75.5
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 1.3e-44 183.0 105 74.3
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 1.3e-44 183.0 107 73.8
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 2.3e-44 182.2 107 72.9
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 3.0e-44 181.8 107 72.9
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 3.9e-44 181.4 107 73.8
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 3.9e-44 181.4 105 74.3
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 3.9e-44 181.4 107 73.8
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 6.6e-44 180.6 106 73.6
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 1.1e-43 179.9 101 74.3
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 1.1e-43 179.9 107 73.8
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 1.5e-43 179.5 106 70.8
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 1.9e-43 179.1 106 74.5
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 1.9e-43 179.1 102 75.5
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 2.5e-43 178.7 108 70.4
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 5.6e-43 177.6 110 67.3
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 7.3e-43 177.2 101 72.3
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 7.3e-43 177.2 107 71.0
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 9.5e-43 176.8 105 73.3
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 2.8e-42 175.3 107 71.0
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 3.6e-42 174.9 134 61.2
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 4.7e-42 174.5 101 72.3
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.4e-41 172.9 98 73.5
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 1.8e-41 172.6 130 60.8
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 2.3e-41 172.2 102 71.6
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 6.8e-41 170.6 102 72.5
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 1.2e-40 169.9 144 57.6
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 1.0e-36 156.8 90 71.1
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 2.3e-36 155.6 140 55.0
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 3.9e-36 154.8 131 57.3
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 6.6e-36 154.1 95 69.5
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 1.5e-35 152.9 84 78.6
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 4.3e-35 151.4 88 72.7
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 7.3e-35 150.6 100 66.0
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 1.4e-33 146.4 104 60.6
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 1.5e-32 142.9 112 55.4
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 3.4e-32 141.7 121 52.9
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 7.8e-29 130.6 72 80.6
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 3.9e-28 128.3 89 58.4
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 6.6e-28 127.5 107 57.9
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 6.2e-26 120.9 132 47.7
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 6.2e-26 120.9 89 56.2
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 4.4e-24 114.8 85 60.0
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 2.2e-23 112.5 68 72.1
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 1.6e-21 106.3 107 45.8
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 1.7e-20 102.8 59 71.2
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 7.3e-19 97.4 95 46.3
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 4.0e-17 91.7 54 74.1
HPP92_015957 Vanilla planifolia HOM05D007226 ORTHO05D009160 8.4e-07 57.4 41 56.1


User provided reference genes

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