Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 2.2e-151 538.9 263 100.0
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 3.0e-148 528.5 263 98.5
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 2.0e-128 462.6 263 82.1
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 2.9e-127 458.8 263 81.7
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 3.8e-127 458.4 263 82.1
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 5.5e-126 454.5 263 81.7
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 2.5e-123 445.7 265 79.2
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 4.3e-115 418.3 262 76.0
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 1.3e-114 416.8 264 74.6
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 4.6e-109 398.3 261 71.6
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 2.2e-103 379.4 263 68.1
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 8.5e-103 377.5 266 68.0
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 1.1e-102 377.1 263 66.9
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 5.5e-102 374.8 263 69.2
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 1.2e-101 373.6 263 67.3
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 1.2e-101 373.6 263 68.1
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 1.6e-101 373.2 263 68.4
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 2.7e-101 372.5 261 68.2
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 4.6e-101 371.7 263 67.7
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 6.1e-101 371.3 264 67.8
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 1.4e-100 370.2 262 66.8
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 2.0e-99 366.3 259 68.7
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 2.0e-99 366.3 264 67.4
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 7.4e-99 364.4 262 66.0
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 7.4e-99 364.4 262 66.0
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 9.7e-99 364.0 262 65.6
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.8e-98 362.5 262 65.6
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 2.8e-98 362.5 263 66.9
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 3.7e-98 362.1 263 66.9
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 4.8e-98 361.7 262 64.9
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 3.1e-97 359.0 263 67.3
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 4.1e-97 358.6 268 64.6
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 4.1e-97 358.6 263 63.5
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 5.3e-97 358.2 265 64.9
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 1.5e-96 356.7 305 57.4
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 3.4e-96 355.5 261 64.8
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 3.8e-95 352.1 262 64.5
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 1.9e-94 349.7 265 64.9
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 2.5e-94 349.4 265 63.0
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 2.5e-94 349.4 265 64.2
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 6.1e-93 344.7 254 64.6
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 7.9e-93 344.4 265 62.6
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 5.2e-92 341.7 261 62.1
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 1.5e-91 340.1 254 64.2
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 3.3e-91 339.0 254 64.2
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 4.4e-91 338.6 254 62.6
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 1.3e-90 337.0 259 63.7
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 1.3e-90 337.0 254 63.0
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 1.7e-90 336.7 265 61.9
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 1.1e-89 334.0 254 62.6
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 1.4e-89 333.6 262 62.6
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 2.4e-89 332.8 265 61.9
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 5.3e-89 331.6 254 61.8
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 3.5e-88 328.9 251 63.3
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 3.5e-88 328.9 263 62.0
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 4.5e-88 328.6 256 61.7
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 1.3e-87 327.0 268 62.7
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 1.1e-86 323.9 267 61.0
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 2.5e-86 322.8 268 59.7
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 3.6e-85 318.9 265 57.4
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 1.0e-84 317.4 254 59.1
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 5.2e-84 315.1 265 56.2
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 6.7e-84 314.7 256 59.8
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 3.1e-81 305.8 265 56.6
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 7.0e-81 304.7 218 67.0
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 2.0e-80 303.1 221 65.2
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 2.0e-80 303.1 263 58.6
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 1.5e-75 287.0 254 56.7
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.7e-74 282.3 173 77.5
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 3.7e-74 282.3 173 77.5
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 5.9e-72 275.0 254 53.9
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 8.9e-68 261.2 226 54.0
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 1.2e-67 260.8 179 69.8
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 2.4e-65 253.1 225 55.1
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 4.5e-64 248.8 221 52.5
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 1.1e-62 244.2 228 52.2
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 8.0e-61 238.0 158 74.1
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 3.5e-56 222.6 180 61.1
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 6.8e-52 208.4 128 71.9
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 7.8e-48 194.9 283 43.8
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 2.5e-46 189.9 133 69.2
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 4.0e-44 182.6 182 51.1
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 1.1e-41 174.5 182 47.3
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 4.6e-40 169.1 163 50.9
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 5.1e-39 165.6 132 63.6
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 5.2e-36 155.6 162 50.6
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.2e-35 154.5 121 62.0
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 5.4e-33 145.6 100 65.0
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 6.6e-31 138.7 107 65.4
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.3e-30 136.3 315 32.1
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 7.3e-30 135.2 315 31.7
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 1.6e-24 117.5 98 62.2
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.5e-14 83.6 53 67.9
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.3e-13 81.3 53 66.0
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 1.8e-12 77.4 72 54.2
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 4.0e-12 76.3 81 46.9
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 4.9e-10 69.3 111 42.3


User provided reference genes

Program Settings