Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8F5MWG Arachis hypogaea HOM05D006893 ORTHO05D008495 5.9e-141 504.2 259 100.0
arahy.Tifrunner.gnm1.ann1.IR9GWY Arachis hypogaea HOM05D006893 ORTHO05D008495 4.3e-91 338.6 193 93.8
arahy.Tifrunner.gnm1.ann1.RE2MDR Arachis hypogaea HOM05D006893 ORTHO05D008495 9.4e-46 188.0 94 93.6
CiPaw.01G144100 Carya illinoinensis HOM05D006893 ORTHO05D008495 2.1e-37 160.2 256 43.8
TWI53G1979 Tripterygium wilfordii HOM05D006893 ORTHO05D008495 3.6e-37 159.5 244 43.4
CiPaw.02G078700 Carya illinoinensis HOM05D006893 ORTHO05D008495 8.8e-36 154.8 244 48.0
Cpa.g.sc9.112 Carica papaya HOM05D006893 ORTHO05D008495 7.4e-35 151.8 258 46.5
Duzib212G0998 Durio zibethinus HOM05D006893 ORTHO05D008495 2.2e-34 150.2 277 39.4
TPR.G4842 Trifolium pratense HOM05D006893 ORTHO05D008495 2.8e-34 149.8 245 44.9
Prupe.1G129100 Prunus persica HOM05D006893 ORTHO05D008495 2.4e-33 146.7 276 40.6
Aqoxy2G02860 Aquilegia oxysepala HOM05D006893 ORTHO05D008495 3.1e-33 146.4 242 41.3
Potri.010G005300 Populus trichocarpa HOM05D006893 ORTHO05D008495 1.2e-32 144.4 272 40.8
TWI09G0148 Tripterygium wilfordii HOM05D006893 ORTHO05D008495 1.2e-32 144.4 304 35.9
MD16G1161600 Malus domestica HOM05D006893 ORTHO05D008495 1.6e-32 144.1 330 35.2
Hma1.2p1_1352F.1_g277580 Hydrangea macrophylla HOM05D006893 ORTHO05D008495 2.6e-32 143.3 312 40.7
Thecc.04G291400 Theobroma cacao HOM05D006893 ORTHO05D008495 2.6e-32 143.3 286 38.1
Ca_21468_v3 Cicer arietinum L. HOM05D006893 ORTHO05D008495 3.5e-32 142.9 254 42.9
Ca_21502_v3 Cicer arietinum L. HOM05D006893 ORTHO05D008495 3.5e-32 142.9 254 42.9
Manes.03G200250 Manihot esculenta HOM05D006893 ORTHO05D008495 3.5e-32 142.9 250 44.4
Lj4g0003398 Lotus japonicus HOM05D006893 ORTHO05D008495 2.2e-31 140.2 285 36.1
Lj4g0016264 Lotus japonicus HOM05D006893 ORTHO05D008495 2.2e-31 140.2 285 36.1
Dinv44337 Davidia involucrata HOM05D006893 ORTHO05D008495 5.0e-31 139.0 252 44.8
Manes.15G008800 Manihot esculenta HOM05D006893 ORTHO05D008495 5.0e-31 139.0 291 37.5
Sabra10G0004500 Salix brachista HOM05D006893 ORTHO05D008495 5.0e-31 139.0 260 42.7
TAR362G0125 Trochodendron aralioides HOM05D006893 ORTHO05D008495 1.9e-30 137.1 263 41.1
Nn3g21581 Nelumbo nucifera HOM05D006893 ORTHO05D008495 2.5e-30 136.7 245 44.5
Psat4g024920 Pisum sativum HOM05D006893 ORTHO05D008495 5.5e-30 135.6 247 43.7
QL06p010948 Quercus lobata HOM05D006893 ORTHO05D008495 7.2e-30 135.2 261 42.9
Nn4g25705 Nelumbo nucifera HOM05D006893 ORTHO05D008495 2.1e-29 133.7 248 43.5
TAR365G1113 Trochodendron aralioides HOM05D006893 ORTHO05D008495 3.6e-29 132.9 257 42.4
Lalb_Chr07g0182231 Lupinus albus HOM05D006893 ORTHO05D008495 4.7e-29 132.5 241 38.6
Actinidia40309 Actinidia chinensis HOM05D006893 ORTHO05D008495 6.1e-29 132.1 286 44.1
Cc03_g01320 Coffea canephora HOM05D006893 ORTHO05D008495 6.1e-29 132.1 260 43.1
VMungo1215G1370 Vigna mungo HOM05D000322 ORTHO05D000186 6.1e-29 132.1 256 43.8
Cfa015452 Carpinus fangiana HOM05D006893 ORTHO05D008495 2.3e-28 130.2 256 44.5
Gorai.005G062300 Gossypium raimondii HOM05D006893 ORTHO05D008495 2.3e-28 130.2 274 38.7
Glyma.07G244000 Glycine max HOM05D006893 ORTHO05D008495 3.0e-28 129.8 243 41.6
Haze_01136 Corylus avellana HOM05D006893 ORTHO05D008495 4.0e-28 129.4 256 44.5
Medtr4g120750 Medicago truncatula HOM05D006893 ORTHO05D008495 6.8e-28 128.6 245 40.0
Duzib052G0831 Durio zibethinus HOM05D006893 ORTHO05D008495 2.0e-27 127.1 263 37.3
Dinv29707 Davidia involucrata HOM05D006893 ORTHO05D008495 2.6e-27 126.7 291 39.9
FAN12G3246 Fragaria x ananassa HOM05D006893 ORTHO05D008495 3.4e-27 126.3 273 41.4
FAN12G4353 Fragaria x ananassa HOM05D006893 ORTHO05D008495 3.4e-27 126.3 273 41.4
Gohir.D02G056400 Gossypium hirsutum HOM05D006893 ORTHO05D008495 5.7e-27 125.6 273 37.7
FvH4_4g18950 Fragaria vesca HOM05D006893 ORTHO05D008495 7.5e-27 125.2 273 42.1
Lj6C683T11 Lonicera japonica HOM05D006893 ORTHO05D008495 2.8e-26 123.2 317 38.2
Ciclev10005318m.g Citrus clementina HOM05D006893 ORTHO05D008495 3.7e-26 122.9 337 31.5
SGA_v2.0_scaffold146G36231 Striga asiatica HOM05D006893 ORTHO05D008495 4.8e-26 122.5 297 36.4
Phvul.003G108900 Phaseolus vulgaris HOM05D006893 ORTHO05D008495 6.3e-26 122.1 240 42.9
GSVIVG01035078001 Vitis vinifera HOM05D006893 ORTHO05D008495 1.1e-25 121.3 270 38.5
MBI18_g04566_MAGBIO Magnolia biondii HOM05D006893 ORTHO05D008495 4.1e-25 119.4 261 38.3
Gohir.A02G051500 Gossypium hirsutum HOM05D006893 ORTHO05D008495 1.6e-24 117.5 273 37.7
Oeu033816.1 Olea europaea HOM05D006893 ORTHO05D008495 1.6e-24 117.5 245 40.4
Migut.N00064 Erythranthe guttata HOM05D006893 ORTHO05D008495 5.9e-24 115.5 307 37.1
Glyma.17G029900 Glycine max HOM05D006893 ORTHO05D008495 1.0e-23 114.8 241 43.6
TAR371G1102 Trochodendron aralioides HOM05D006893 ORTHO05D008495 1.0e-23 114.8 274 35.8
TAR636G3297 Trochodendron aralioides HOM05D006893 ORTHO05D008495 1.0e-23 114.8 274 35.8
FAN07G1462 Fragaria x ananassa HOM05D006893 ORTHO05D008495 2.2e-23 113.6 274 39.8
Eucgr.H03971 Eucalyptus grandis HOM05D006893 ORTHO05D008495 3.8e-23 112.8 279 39.1
PSO407G0319 Papaver somniferum HOM05D006893 ORTHO05D008495 1.6e-21 107.5 259 39.4
Glyma.15G146700 Glycine max HOM05D006893 ORTHO05D008495 8.0e-21 105.1 180 47.2
Gohir.A10G167700 Gossypium hirsutum HOM05D006893 ORTHO05D008495 1.8e-20 104.0 246 36.2
Nitab4.5_0000306g0330 Nicotiana tabacum HOM05D006893 ORTHO05D008495 1.8e-20 104.0 321 35.2
MD13G1161800 Malus domestica HOM05D006893 ORTHO05D008495 6.8e-20 102.1 342 34.5
RcHm_v2.0_Chr4g0423841 Rosa chinensis HOM05D006893 ORTHO05D008495 8.8e-20 101.7 283 37.5
Nitab4.5_0002755g0070 Nicotiana tabacum HOM05D006893 ORTHO05D008495 1.2e-19 101.3 320 32.2
CAN.G14.14 Capsicum annuum HOM05D006893 ORTHO05D008495 1.5e-19 100.9 336 31.5
PSO170G0180 Papaver somniferum HOM05D006893 ORTHO05D008495 2.6e-19 100.1 253 35.6
Duzib151G1176 Durio zibethinus HOM05D006893 ORTHO05D008495 4.4e-19 99.4 330 31.2
Peaxi162Scf00065g01019 Petunia axillaris HOM05D006893 ORTHO05D008495 4.4e-19 99.4 351 30.5
PGR004G1654 Punica granatum HOM05D006893 ORTHO05D008495 7.5e-19 98.6 302 31.5
EL10Ac3g04934 Beta vulgaris HOM05D006893 ORTHO05D008495 9.8e-19 98.2 350 33.1
Oeu016262.1 Olea europaea HOM05D006893 ORTHO05D008495 2.2e-18 97.1 240 37.1
MSTRG.21783 Avicennia marina HOM05D006893 ORTHO05D008495 2.8e-18 96.7 361 28.5
CANSAT78G1743 Cannabis sativa HOM05D006893 ORTHO05D008495 6.3e-18 95.5 337 32.6
vmacro08097 Vaccinium macrocarpon HOM05D006893 ORTHO05D008495 1.8e-17 94.0 305 36.4
Rhsim04G0228400 Rhododendron simsii HOM05D006893 ORTHO05D008495 4.1e-17 92.8 302 38.4
CDE05G0963 Ceratophyllum demersum HOM05D006893 ORTHO05D008495 2.0e-16 90.5 245 33.5
MSTRG.3881 Avicennia marina HOM05D006893 ORTHO05D008495 4.5e-16 89.4 240 33.3
CDE11G0221 Ceratophyllum demersum HOM05D006893 ORTHO05D008495 1.3e-15 87.8 249 31.3
ECA240G3740 Erigeron canadensis HOM05D006893 ORTHO05D008495 2.9e-15 86.7 195 40.5
DCAR_023309 Daucus carota HOM05D006893 ORTHO05D008495 3.8e-15 86.3 208 40.4
PGSC0003DMG400006243 Solanum tuberosum HOM05D006893 ORTHO05D008495 1.5e-14 84.3 356 32.3
THA.LOC104823747 Tarenaya hassleriana HOM05D006893 ORTHO05D008495 1.5e-14 84.3 72 59.7
HanXRQChr03g0084941 Helianthus annuus HOM05D006893 ORTHO05D008495 2.5e-14 83.6 203 41.4
ECA246G0139 Erigeron canadensis HOM05D006893 ORTHO05D008495 3.3e-14 83.2 188 34.0
Hund03092 Selenicereus undatus HOM05D006893 ORTHO05D008495 3.3e-14 83.2 364 30.5
Solyc01g065690.3 Solanum lycopersicum HOM05D006893 ORTHO05D008495 5.5e-14 82.4 382 30.6
CSS0018997 Camellia sinensis var. sinensis HOM05D006893 ORTHO05D008495 9.5e-14 81.6 155 43.2
Sopen01g027090 Solanum pennellii HOM05D006893 ORTHO05D008495 1.2e-13 81.3 387 30.5
SalBow2G1430 Salvia bowleyana HOM05D006893 ORTHO05D008495 4.7e-13 79.3 247 36.0
Oeu028327.1 Olea europaea HOM05D006893 ORTHO05D008495 1.0e-12 78.2 130 40.0
CsaV3_3G014950 Cucumis sativus L. HOM05D006893 ORTHO05D008495 1.8e-12 77.4 360 29.4
MELO3C006691.2 Cucumis melo HOM05D006893 ORTHO05D008495 6.8e-12 75.5 359 29.8
Lsat_1_v5_gn_3_21921 Lactuca sativa HOM05D006893 ORTHO05D008495 6.8e-12 75.5 196 39.3
Hma1.2p1_0013F.1_g009095 Hydrangea macrophylla HOM05D006893 ORTHO05D008495 8.9e-12 75.1 142 50.0
ClCG05G006320 Citrullus lanatus HOM05D006893 ORTHO05D008495 2.6e-11 73.6 340 27.1
THA.LOC104805828 Tarenaya hassleriana HOM05D006893 ORTHO05D008495 7.5e-11 72.0 65 58.5
MBI19_g05148_MAGBIO Magnolia biondii HOM05D006893 ORTHO05D008495 9.8e-11 71.6 246 34.6
Aqoxy22s005 Aquilegia oxysepala HOM05D006893 ORTHO05D008495 1.3e-10 71.2 53 64.2
PSO357G0434 Papaver somniferum HOM05D006893 ORTHO05D008495 1.3e-10 71.2 363 29.8
Atru.chr4.2934 Acer truncatum HOM05D006893 ORTHO05D008495 3.7e-10 69.7 52 67.3
PSO170G5603 Papaver somniferum HOM05D006893 ORTHO05D008495 4.9e-10 69.3 354 28.8
AUR62035073 Chenopodium quinoa HOM05D006893 ORTHO05D008495 6.3e-10 68.9 387 27.9
AUR62016159 Chenopodium quinoa HOM05D006893 ORTHO05D008495 5.9e-08 62.4 299 25.4
ATR0693G301 Amborella trichopoda HOM05D006893 ORTHO05D008495 5.0e-07 59.3 262 32.8
COL.COLO4_34693 Corchorus olitorius HOM05D006893 ORTHO05D008495 5.0e-07 59.3 56 51.8
Ah.04g155120 Amaranthus hybridus HOM05D006893 ORTHO05D008495 1.5e-06 57.8 301 31.9
Sed0012680 Sechium edule HOM05D006893 ORTHO05D008495 1.5e-06 57.8 398 25.4


User provided reference genes

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