Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8F1CK2 Arachis hypogaea HOM05D007513 ORTHO05D008148 4.5e-80 301.2 154 100.0
arahy.Tifrunner.gnm1.ann1.LDCV9W Arachis hypogaea HOM05D007513 ORTHO05D008148 1.5e-59 233.0 125 96.0
arahy.Tifrunner.gnm1.ann1.P2RW0X Arachis hypogaea HOM05D007513 ORTHO05D008148 8.9e-52 207.2 111 95.5
arahy.Tifrunner.gnm1.ann1.QIRY5C Arachis hypogaea HOM05D007513 ORTHO05D008148 7.5e-51 204.1 111 94.6
arahy.Tifrunner.gnm1.ann1.QIF42D Arachis hypogaea HOM05D007513 ORTHO05D008148 6.6e-39 164.5 94 91.5
Medtr4g088715 Medicago truncatula HOM05D007513 ORTHO05D008148 4.6e-24 115.2 87 65.5
Ca_18552_v3 Cicer arietinum L. HOM05D007513 ORTHO05D008148 6.0e-24 114.8 86 73.3
arahy.Tifrunner.gnm1.ann1.0NDU7B Arachis hypogaea HOM05D007513 ORTHO05D008148 6.6e-23 111.3 93 66.7
TPR.G24448 Trifolium pratense HOM05D007513 ORTHO05D008148 9.6e-22 107.5 87 64.4
Psat6g076840 Pisum sativum HOM05D007513 ORTHO05D008148 2.8e-21 105.9 62 82.3
Psat6g024240 Pisum sativum HOM05D007513 ORTHO05D008148 3.6e-21 105.5 88 68.2
arahy.Tifrunner.gnm1.ann1.9ST4S6 Arachis hypogaea HOM05D007513 ORTHO05D008148 2.0e-19 99.8 55 90.9
Glyma.06G321800 Glycine max HOM05D007513 ORTHO05D008148 9.3e-17 90.9 86 58.1
ClCG10G015420 Citrullus lanatus HOM05D007513 ORTHO05D008148 6.0e-16 88.2 67 64.2
DCAR_017173 Daucus carota HOM05D007513 ORTHO05D008148 7.9e-16 87.8 93 55.9
Dinv26918 Davidia involucrata HOM05D007513 ORTHO05D008148 7.9e-16 87.8 66 65.2
arahy.Tifrunner.gnm1.ann1.S3QGNL Arachis hypogaea HOM05D000640 ORTHO05D008148 1.0e-15 87.4 61 80.3
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea HOM05D005922 ORTHO05D006934 1.7e-15 86.7 46 93.5
Phvul.005G004100 Phaseolus vulgaris HOM05D007513 ORTHO05D008148 1.7e-15 86.7 83 57.8
Dinv04064 Davidia involucrata HOM05D007513 ORTHO05D008148 3.9e-15 85.5 66 63.6
Manes.13G112700 Manihot esculenta HOM05D007513 ORTHO05D008148 3.9e-15 85.5 65 63.1
CANSAT01G0833 Cannabis sativa HOM05D007513 ORTHO05D008148 5.1e-15 85.1 66 62.1
CiPaw.02G003300 Carya illinoinensis HOM05D007513 ORTHO05D008148 6.6e-15 84.7 65 64.6
TWI09G0373 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 8.7e-15 84.3 66 63.6
Ciclev10023109m.g Citrus clementina HOM05D007513 ORTHO05D008148 1.9e-14 83.2 66 60.6
VMungo1080G1633 Vigna mungo HOM05D007513 ORTHO05D008148 2.5e-14 82.8 100 51.0
Actinidia03699 Actinidia chinensis HOM05D007513 ORTHO05D008148 3.3e-14 82.4 83 54.2
CsaV3_3G041080 Cucumis sativus L. HOM05D007513 ORTHO05D008148 3.3e-14 82.4 76 56.6
Eucgr.A01208 Eucalyptus grandis HOM05D007513 ORTHO05D008148 4.3e-14 82.0 64 65.6
Hma1.2p1_0730F.1_g209790 Hydrangea macrophylla HOM05D007513 ORTHO05D008148 5.6e-14 81.6 62 64.5
Sed0010624 Sechium edule HOM05D007513 ORTHO05D008148 5.6e-14 81.6 78 53.8
Glyma.04G112900 Glycine max HOM05D007513 ORTHO05D008148 7.3e-14 81.3 86 53.5
Lalb_Chr08g0235081 Lupinus albus HOM05D007513 ORTHO05D008148 1.3e-13 80.5 72 55.6
Potri.009G004400 Populus trichocarpa HOM05D007513 ORTHO05D008148 1.3e-13 80.5 65 58.5
arahy.Tifrunner.gnm1.ann1.N7EVBW Arachis hypogaea HOM05D007513 ORTHO05D008148 1.6e-13 80.1 44 93.2
arahy.Tifrunner.gnm1.ann1.X3Z0KH Arachis hypogaea HOM05D003009 ORTHO05D008148 3.6e-13 79.0 65 63.1
TWI73G0368 Tripterygium wilfordii HOM05D007513 ORTHO05D008148 3.6e-13 79.0 66 59.1
CSS0003656 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 4.8e-13 78.6 101 46.5
Lalb_Chr24g0403261 Lupinus albus HOM05D007513 ORTHO05D008148 4.8e-13 78.6 72 54.2
CSS0045444 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 8.1e-13 77.8 92 46.7
Cc04_g16170 Coffea canephora HOM05D007513 ORTHO05D008148 1.1e-12 77.4 58 63.8
GSVIVG01023476001 Vitis vinifera HOM05D007513 ORTHO05D008148 1.1e-12 77.4 62 61.3
TAR381G0870 Trochodendron aralioides HOM05D001879 ORTHO05D007648 1.4e-12 77.0 94 43.6
TPR.G16351 Trifolium pratense HOM05D007513 ORTHO05D008148 1.8e-12 76.6 117 43.6
Atru.chr3.153 Acer truncatum HOM05D007513 ORTHO05D008148 3.1e-12 75.9 66 56.1
Atru.chr3.182 Acer truncatum HOM05D007513 ORTHO05D008148 4.0e-12 75.5 66 56.1
arahy.Tifrunner.gnm1.ann1.NLBN4J Arachis hypogaea HOM05D007513 ORTHO05D008148 4.0e-12 75.5 83 53.0
ECA233G3995 Erigeron canadensis HOM05D007513 ORTHO05D008148 4.0e-12 75.5 86 45.3
Lj6g0007185 Lotus japonicus HOM05D007513 ORTHO05D008148 4.0e-12 75.5 83 53.0
unitig_0.g544 Utricularia gibba HOM05D007513 ORTHO05D008148 9.0e-12 74.3 81 48.1
Lsat_1_v5_gn_8_17020 Lactuca sativa HOM05D007513 ORTHO05D008148 1.5e-11 73.6 66 57.6
Nitab4.5_0000714g0120 Nicotiana tabacum HOM05D007513 ORTHO05D008148 1.5e-11 73.6 82 48.8
MELO3C030975.2 Cucumis melo HOM05D007513 ORTHO05D008148 2.0e-11 73.2 69 56.5
DCAR_013160 Daucus carota HOM05D007513 ORTHO05D008148 2.0e-11 73.2 62 59.7
HanXRQChr08g0219071 Helianthus annuus HOM05D007513 ORTHO05D008148 2.0e-11 73.2 65 53.8
PGR102G1378 Punica granatum HOM05D007513 ORTHO05D008148 2.0e-11 73.2 66 54.5
vmacro14398 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 2.0e-11 73.2 74 51.4
HanXRQChr08g0219141 Helianthus annuus HOM05D007513 ORTHO05D008148 2.6e-11 72.8 86 45.3
Lsat_1_v5_gn_8_19701 Lactuca sativa HOM05D007513 ORTHO05D008148 2.6e-11 72.8 82 51.2
Os03g0205150 Oryza sativa ssp. japonica HOM05D007513 ORTHO05D008148 2.6e-11 72.8 76 52.6
AUR62016920 Chenopodium quinoa HOM05D007513 ORTHO05D008148 3.4e-11 72.4 78 52.6
Lj6g0018022 Lotus japonicus HOM05D007513 ORTHO05D008148 4.5e-11 72.0 61 59.0
MD15G1295400 Malus domestica HOM05D007513 ORTHO05D008148 4.5e-11 72.0 84 48.8
vmacro07203 Vaccinium macrocarpon HOM05D007513 ORTHO05D008148 4.5e-11 72.0 105 44.8
MD02G1183800 Malus domestica HOM05D007513 ORTHO05D008148 9.9e-11 70.9 66 54.5
CSS0005454 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 1.3e-10 70.5 55 61.8
CSS0011696 Camellia sinensis var. sinensis HOM05D007513 ORTHO05D008148 1.3e-10 70.5 55 61.8
CDE07G2080 Ceratophyllum demersum HOM05D007513 ORTHO05D008148 1.3e-10 70.5 57 61.4
Duzib264G1124 Durio zibethinus HOM05D007513 ORTHO05D008148 1.3e-10 70.5 90 44.4
Nitab4.5_0001417g0120 Nicotiana tabacum HOM05D007513 ORTHO05D008148 1.3e-10 70.5 57 57.9
Rhsim11G0028000 Rhododendron simsii HOM05D007513 ORTHO05D008148 1.7e-10 70.1 90 46.7
Thecc.01G071100 Theobroma cacao HOM05D007513 ORTHO05D008148 2.2e-10 69.7 56 58.9
Aqoxy7G03437 Aquilegia oxysepala HOM05D007513 ORTHO05D008148 3.8e-10 68.9 70 50.0
Solyc03g044080.4 Solanum lycopersicum HOM05D007513 ORTHO05D008148 3.8e-10 68.9 79 46.8
Prupe.6G222400 Prunus persica HOM05D007513 ORTHO05D008148 6.4e-10 68.2 56 60.7
Gohir.D03G027900 Gossypium hirsutum HOM05D007513 ORTHO05D008148 8.4e-10 67.8 62 50.0
SGA_v2.0_scaffold486G52374 Striga asiatica HOM05D007513 ORTHO05D008148 8.4e-10 67.8 66 51.5
BcaNung02934 Brassica carinata HOM05D014277 ORTHO05D008148 1.4e-09 67.0 104 45.2
Sc16g0003000 Simmondsia chinensis HOM05D007513 ORTHO05D008148 1.4e-09 67.0 79 46.8
SalBow6G0964 Salvia bowleyana HOM05D007513 ORTHO05D008148 3.2e-09 65.9 64 53.1
PGSC0003DMG400014868 Solanum tuberosum HOM05D007513 ORTHO05D008148 3.2e-09 65.9 79 46.8
HPP92_010626 Vanilla planifolia HOM05D007513 ORTHO05D008148 5.5e-09 65.1 60 53.3
HPP92_010652 Vanilla planifolia HOM05D007513 ORTHO05D008148 5.5e-09 65.1 60 53.3
C07p62480 Brassica napus HOM05D014277 ORTHO05D008148 9.3e-09 64.3 104 40.4
Thhalv10027185m.g Eutrema salsugineum HOM05D007513 ORTHO05D008148 9.3e-09 64.3 65 50.8
Aa31LG6G14500 Aethionema arabicum HOM05D007513 ORTHO05D008148 1.2e-08 63.9 79 45.6
Ah.14g088990 Amaranthus hybridus HOM05D007513 ORTHO05D008148 1.2e-08 63.9 54 57.4
A08p22690 Brassica napus HOM05D007513 ORTHO05D008148 1.6e-08 63.5 67 47.8
BcaC01g00397 Brassica carinata HOM05D007513 ORTHO05D008148 2.1e-08 63.2 56 51.8
C03p79260 Brassica napus HOM05D007513 ORTHO05D008148 2.1e-08 63.2 56 51.8
BcaB03g12338 Brassica carinata HOM05D007513 ORTHO05D008148 3.5e-08 62.4 56 51.8
Peaxi162Scf00118g02024 Petunia axillaris HOM05D007513 ORTHO05D008148 3.5e-08 62.4 71 50.7
BolC3t20170H Brassica oleracea HOM05D007513 ORTHO05D008148 4.6e-08 62.0 67 46.3
BraA08t34236Z Brassica rapa HOM05D007513 ORTHO05D008148 4.6e-08 62.0 67 46.3
Carub.0004s0224 Capsella rubella HOM05D007513 ORTHO05D008148 4.6e-08 62.0 56 51.8
EL10Ac8g20627 Beta vulgaris HOM05D007513 ORTHO05D008148 7.9e-08 61.2 57 52.6
BcaNung02064 Brassica carinata HOM05D014277 ORTHO05D008148 7.9e-08 61.2 104 39.4
THA.LOC104807627 Tarenaya hassleriana HOM05D007513 ORTHO05D008148 1.0e-07 60.8 66 47.0
Phvul.010G166000 Phaseolus vulgaris HOM05D007513 ORTHO05D008148 1.3e-07 60.5 44 63.6
Thhalv10000379m.g Eutrema salsugineum HOM05D007513 ORTHO05D008148 2.3e-07 59.7 62 48.4
PSO170G3772 Papaver somniferum HOM05D007513 ORTHO05D008148 3.0e-07 59.3 64 54.7
Cpa.g.sc6.31 Carica papaya HOM05D007513 ORTHO05D008148 3.9e-07 58.9 63 47.6
Sopen03g007910 Solanum pennellii HOM05D007513 ORTHO05D008148 1.9e-06 56.6 69 44.9
RcHm_v2.0_Chr5g0053551 Rosa chinensis HOM05D015974 ORTHO05D008148 2.5e-06 56.2 56 51.8
RcHm_v2.0_Chr5g0053611 Rosa chinensis HOM05D015974 ORTHO05D008148 2.5e-06 56.2 56 51.8


User provided reference genes

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