Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8D2970 Arachis hypogaea HOM05D005558 ORTHO05D006832 1.5e-109 399.4 187 100.0
arahy.Tifrunner.gnm1.ann1.GVHP98 Arachis hypogaea HOM05D005558 ORTHO05D006832 2.0e-106 389.0 181 100.0
Glyma.15G161100 Glycine max HOM05D005558 ORTHO05D006832 1.1e-83 313.5 181 80.1
Lalb_Chr15g0083971 Lupinus albus HOM05D005558 ORTHO05D006832 2.7e-79 298.9 181 75.7
TPR.G20977 Trifolium pratense HOM05D005558 ORTHO05D006832 1.1e-77 293.5 170 81.2
Cfa014170 Carpinus fangiana HOM05D005558 ORTHO05D006832 2.5e-77 292.4 183 76.5
CiPaw.08G079200 Carya illinoinensis HOM05D005558 ORTHO05D006832 4.3e-77 291.6 183 77.0
Sc17g0004140 Simmondsia chinensis HOM05D005558 ORTHO05D006832 4.3e-77 291.6 175 78.9
RcHm_v2.0_Chr7g0217691 Rosa chinensis HOM05D005558 ORTHO05D006832 9.7e-77 290.4 184 76.6
Psat7g129880 Pisum sativum HOM05D005558 ORTHO05D006832 1.7e-76 289.7 187 74.3
Ca_18758_v3 Cicer arietinum L. HOM05D005558 ORTHO05D006832 3.7e-76 288.5 181 76.8
Prupe.5G000800 Prunus persica HOM05D005558 ORTHO05D006832 8.2e-76 287.3 180 75.0
Medtr4g084120 Medicago truncatula HOM05D005558 ORTHO05D006832 1.1e-75 287.0 148 87.2
CiPaw.07G129900 Carya illinoinensis HOM05D005558 ORTHO05D006832 1.4e-75 286.6 170 80.0
arahy.Tifrunner.gnm1.ann1.09GV4T Arachis hypogaea HOM05D005558 ORTHO05D006832 3.1e-75 285.4 150 86.0
arahy.Tifrunner.gnm1.ann1.H4MLSW Arachis hypogaea HOM05D005558 ORTHO05D006832 3.1e-75 285.4 150 86.0
ClCG11G019260 Citrullus lanatus HOM05D005558 ORTHO05D006832 3.1e-75 285.4 161 77.6
MD06G1057400 Malus domestica HOM05D005558 ORTHO05D006832 3.1e-75 285.4 184 73.9
QL02p016334 Quercus lobata HOM05D005558 ORTHO05D006832 4.1e-75 285.0 159 81.8
Lj4g0004166 Lotus japonicus HOM05D005558 ORTHO05D006832 6.9e-75 284.3 170 79.4
Aqoxy5G00965 Aquilegia oxysepala HOM05D005558 ORTHO05D006832 9.1e-75 283.9 189 69.3
Hma1.2p1_0914F.1_g236230 Hydrangea macrophylla HOM05D005558 ORTHO05D006832 9.1e-75 283.9 178 73.6
Nn6g31548 Nelumbo nucifera HOM05D005558 ORTHO05D006832 9.1e-75 283.9 169 76.9
PGR083G0867 Punica granatum HOM05D005558 ORTHO05D006832 9.1e-75 283.9 173 76.9
PSO170G6225 Papaver somniferum HOM05D005558 ORTHO05D006832 1.2e-74 283.5 147 85.7
PSO017G1036 Papaver somniferum HOM05D005558 ORTHO05D006832 1.5e-74 283.1 147 86.4
FAN04G1408 Fragaria x ananassa HOM05D005558 ORTHO05D006832 3.4e-74 282.0 186 74.2
Glyma.07G221200 Glycine max HOM05D005558 ORTHO05D006832 3.4e-74 282.0 150 84.7
Lsat_1_v5_gn_2_2740 Lactuca sativa HOM05D005558 ORTHO05D006832 4.5e-74 281.6 168 78.0
Manes.18G000600 Manihot esculenta HOM05D005558 ORTHO05D006832 5.9e-74 281.2 156 80.8
Phvul.002G097800 Phaseolus vulgaris HOM05D005558 ORTHO05D006832 5.9e-74 281.2 150 85.3
Lalb_Chr05g0219661 Lupinus albus HOM05D005558 ORTHO05D006832 7.7e-74 280.8 147 85.0
Potri.002G001500 Populus trichocarpa HOM05D005558 ORTHO05D006832 7.7e-74 280.8 145 85.5
CSS0024776 Camellia sinensis var. sinensis HOM05D005558 ORTHO05D006832 1.0e-73 280.4 190 71.1
FvH4_5g26780 Fragaria vesca HOM05D005558 ORTHO05D006832 1.0e-73 280.4 183 72.1
FAN18G4437 Fragaria x ananassa HOM05D005558 ORTHO05D006832 1.0e-73 280.4 183 72.1
Nitab4.5_0003423g0040 Nicotiana tabacum HOM05D005558 ORTHO05D006832 1.0e-73 280.4 186 69.4
Carub.0001s2052 Capsella rubella HOM05D005558 ORTHO05D006832 1.7e-73 279.6 153 83.0
CsaV3_4G037850 Cucumis sativus L. HOM05D005558 ORTHO05D006832 2.2e-73 279.3 161 76.4
THA.LOC104813721 Tarenaya hassleriana HOM05D005558 ORTHO05D006832 2.9e-73 278.9 163 80.4
FAN08G1374 Fragaria x ananassa HOM05D005558 ORTHO05D006832 3.8e-73 278.5 183 72.7
COL.COLO4_12262 Corchorus olitorius HOM05D005558 ORTHO05D006832 8.5e-73 277.3 148 85.8
Thecc.08G097300 Theobroma cacao HOM05D005558 ORTHO05D006832 8.5e-73 277.3 159 80.5
EL10Ac7g17248 Beta vulgaris HOM05D005558 ORTHO05D006832 1.1e-72 276.9 143 86.0
CANSAT25G0089 Cannabis sativa HOM05D005558 ORTHO05D006832 1.1e-72 276.9 174 74.7
MD07G1016000 Malus domestica HOM05D005558 ORTHO05D006832 1.4e-72 276.6 149 84.6
TWI12G1391 Tripterygium wilfordii HOM05D005558 ORTHO05D006832 1.4e-72 276.6 187 71.7
Gohir.A05G177400 Gossypium hirsutum HOM05D005558 ORTHO05D006832 1.9e-72 276.2 159 81.1
Gohir.D05G180800 Gossypium hirsutum HOM05D005558 ORTHO05D006832 1.9e-72 276.2 159 81.1
Gorai.009G185800 Gossypium raimondii HOM05D005558 ORTHO05D006832 1.9e-72 276.2 159 81.1
Sopen12g031670 Solanum pennellii HOM05D005558 ORTHO05D006832 1.9e-72 276.2 190 67.9
AL1G34110 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 2.5e-72 275.8 169 76.9
Ah.08g212310 Amaranthus hybridus HOM05D005558 ORTHO05D006832 3.2e-72 275.4 155 80.6
CARHR021510 Cardamine hirsuta HOM05D005558 ORTHO05D006832 4.2e-72 275.0 183 72.1
Solyc12g095770.2 Solanum lycopersicum HOM05D005558 ORTHO05D006832 4.2e-72 275.0 190 67.9
MSTRG.24533 Avicennia marina HOM05D005558 ORTHO05D006832 5.5e-72 274.6 166 74.7
BraA06t24816Z Brassica rapa HOM05D005558 ORTHO05D006832 5.5e-72 274.6 152 83.6
GSVIVG01013466001 Vitis vinifera HOM05D005558 ORTHO05D006832 5.5e-72 274.6 149 81.9
BcaB07g32099 Brassica carinata HOM05D005558 ORTHO05D006832 1.2e-71 273.5 145 85.5
BcaC05g26014 Brassica carinata HOM05D005558 ORTHO05D006832 1.2e-71 273.5 166 77.1
CAN.G208.43 Capsicum annuum HOM05D005558 ORTHO05D006832 1.2e-71 273.5 172 70.9
BcaB03g12837 Brassica carinata HOM05D005558 ORTHO05D006832 1.6e-71 273.1 187 72.2
A06p17130 Brassica napus HOM05D005558 ORTHO05D006832 1.6e-71 273.1 152 82.9
Hund05339 Selenicereus undatus HOM05D005558 ORTHO05D006832 1.6e-71 273.1 174 73.6
BcaC07g39074 Brassica carinata HOM05D005558 ORTHO05D006832 2.1e-71 272.7 168 78.0
Cc10_g00070 Coffea canephora HOM05D005558 ORTHO05D006832 2.1e-71 272.7 144 82.6
BraA08t34846Z Brassica rapa HOM05D005558 ORTHO05D006832 2.7e-71 272.3 180 74.4
A08p29100 Brassica napus HOM05D005558 ORTHO05D006832 4.7e-71 271.6 174 75.3
Sp1g18730 Schrenkiella parvula HOM05D005558 ORTHO05D006832 4.7e-71 271.6 181 71.8
BolC8t49687H Brassica oleracea HOM05D005558 ORTHO05D006832 6.1e-71 271.2 168 77.4
Rhsim06G0000500 Rhododendron simsii HOM05D005558 ORTHO05D006832 6.1e-71 271.2 181 70.7
PGSC0003DMG400029397 Solanum tuberosum HOM05D005558 ORTHO05D006832 7.9e-71 270.8 146 80.1
Duzib116G0928 Durio zibethinus HOM05D005558 ORTHO05D006832 1.8e-70 269.6 156 79.5
Eucgr.F01955 Eucalyptus grandis HOM05D005558 ORTHO05D006832 1.8e-70 269.6 203 66.5
AT1G21065 Arabidopsis thaliana HOM05D005558 ORTHO05D006832 2.3e-70 269.2 169 74.6
Migut.N03003 Erythranthe guttata HOM05D005558 ORTHO05D006832 3.0e-70 268.9 165 73.9
Thhalv10008709m.g Eutrema salsugineum HOM05D005558 ORTHO05D006832 3.0e-70 268.9 184 71.7
Zm00001eb387340 Zea mays HOM05D005558 ORTHO05D006832 6.7e-70 267.7 144 81.2
ATR0605G185 Amborella trichopoda HOM05D005558 ORTHO05D006832 9.7e-69 263.8 144 81.9
SGA_v2.0_scaffold19G08925 Striga asiatica HOM05D005558 ORTHO05D006832 2.2e-68 262.7 148 81.1
Zm00001eb234660 Zea mays HOM05D005558 ORTHO05D006832 2.2e-68 262.7 144 78.5
HPP92_021698 Vanilla planifolia HOM05D005558 ORTHO05D006832 4.8e-68 261.5 143 79.7
Peaxi162Scf00064g01430 Petunia axillaris HOM05D005558 ORTHO05D006832 6.3e-68 261.2 160 72.5
Os02g0187500 Oryza sativa ssp. japonica HOM05D005558 ORTHO05D006832 1.1e-67 260.4 144 79.9
HPP92_017798 Vanilla planifolia HOM05D005558 ORTHO05D006832 1.2e-66 256.9 145 79.3
SEGI_40156 Sequoiadendron giganteum HOM05D005558 ORTHO05D006832 1.1e-64 250.4 147 75.5
Mapoly0002s0034 Marchantia polymorpha HOM05D005558 ORTHO05D006832 1.0e-62 243.8 142 73.9
SMO259G0018 Selaginella moellendorffii HOM05D005558 ORTHO05D006832 1.8e-62 243.0 142 73.2
Pp3c1_31360 Physcomitrium patens HOM05D005558 ORTHO05D006832 2.3e-62 242.7 167 66.5
HanXRQChr14g0427511 Helianthus annuus HOM05D005558 ORTHO05D006832 7.5e-61 237.7 163 71.8
Sabra02G0001000 Salix brachista HOM05D005558 ORTHO05D006832 2.2e-60 236.1 163 69.9
TAR381G1539 Trochodendron aralioides HOM05D005558 ORTHO05D006832 2.2e-60 236.1 142 76.8
Atru.chr13.17 Acer truncatum HOM05D005558 ORTHO05D006832 8.2e-60 234.2 159 71.1
ECA238G0376 Erigeron canadensis HOM05D005558 ORTHO05D006832 9.1e-59 230.7 126 83.3
AUR62041000 Chenopodium quinoa HOM05D005558 ORTHO05D006832 3.5e-58 228.8 133 76.7
Actinidia15539 Actinidia chinensis HOM05D005558 ORTHO05D006832 4.5e-58 228.4 121 83.5
Nitab4.5_0001309g0160 Nicotiana tabacum HOM05D005558 ORTHO05D006832 4.5e-58 228.4 127 78.7
Ciclev10002303m.g Citrus clementina HOM05D005558 ORTHO05D006832 5.9e-58 228.0 124 82.3
Phvul.009G240200 Phaseolus vulgaris HOM05D005558 ORTHO05D006832 5.9e-58 228.0 144 75.0
Sed0017561 Sechium edule HOM05D005558 ORTHO05D006832 7.7e-58 227.6 134 76.9
C08p20580 Brassica napus HOM05D005558 ORTHO05D006832 1.7e-57 226.5 146 75.3
MELO3C017079.2 Cucumis melo HOM05D005558 ORTHO05D006832 6.5e-57 224.6 119 83.2
BolC5t30678H Brassica oleracea HOM05D000370 ORTHO05D006832 7.2e-56 221.1 138 74.6
Lj4C814G4 Lonicera japonica HOM05D005558 ORTHO05D006832 2.1e-55 219.5 170 63.5
Cre17.g739300 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D006832 8.8e-54 214.2 140 68.6
SGA_v2.0_scaffold25G11031 Striga asiatica HOM05D005558 ORTHO05D006832 1.7e-52 209.9 152 66.4
Prupe.5G000700 Prunus persica HOM05D005558 ORTHO05D006832 2.8e-52 209.1 120 79.2
Dinv05517 Davidia involucrata HOM05D005558 ORTHO05D006832 1.1e-51 207.2 147 69.4
VMungo0251G0776 Vigna mungo HOM05D005558 ORTHO05D006832 1.6e-50 203.4 111 83.8
Os06g0638200 Oryza sativa ssp. japonica HOM05D005558 ORTHO05D006832 1.5e-48 196.8 98 89.8
vmacro21735 Vaccinium macrocarpon HOM05D005558 ORTHO05D006832 2.0e-42 176.4 96 83.3
Haze_22894 Corylus avellana HOM05D005558 ORTHO05D006832 3.5e-42 175.6 183 50.8
SMO203G0115 Selaginella moellendorffii HOM05D005558 ORTHO05D006832 5.9e-42 174.9 150 54.0
TAR376G0283 Trochodendron aralioides HOM05D005558 ORTHO05D006832 5.9e-42 174.9 90 86.7
Mapoly0065s0101 Marchantia polymorpha HOM05D005558 ORTHO05D006832 1.3e-41 173.7 185 48.6
SEGI_39286 Sequoiadendron giganteum HOM05D005558 ORTHO05D006832 1.5e-40 170.2 147 55.1
Oeu000735.2 Olea europaea HOM05D005558 ORTHO05D006832 1.6e-39 166.8 99 75.8
Pp3c2_25680 Physcomitrium patens HOM05D005558 ORTHO05D006832 2.1e-39 166.4 187 46.0
Peaxi162Scf00064g01422 Petunia axillaris HOM05D005558 ORTHO05D006832 2.6e-37 159.5 116 63.8
Cre01.g043100 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D006832 1.7e-36 156.8 140 52.1
CDE04G3086 Ceratophyllum demersum HOM05D000433 ORTHO05D000443 1.9e-32 143.3 169 43.2
SalBow6G6347 Salvia bowleyana HOM05D005558 ORTHO05D006832 2.5e-32 142.9 166 47.0
Cfa023908 Carpinus fangiana HOM05D005558 ORTHO05D006832 9.5e-32 141.0 185 38.9
CBR_g570 Chara braunii HOM05D005558 ORTHO05D006832 2.3e-30 136.3 85 71.8
AL8G17720 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 1.7e-28 130.2 72 86.1
AL5G16180 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 1.6e-26 123.6 70 84.3
MCO09G054 Micromonas commoda HOM05D005558 ORTHO05D006832 3.0e-25 119.4 133 45.9
C05p19780 Brassica napus HOM05D005558 ORTHO05D006832 3.3e-24 115.9 59 84.7
HPP92_021704 Vanilla planifolia HOM05D005558 ORTHO05D006832 2.3e-22 109.8 120 47.5
BcaC07g39073 Brassica carinata HOM05D005558 ORTHO05D006832 2.9e-20 102.8 53 84.9
Aa31LG7G5210 Aethionema arabicum HOM05D005558 ORTHO05D006832 1.6e-18 97.1 168 38.7
AagrBONN_evm.TU.Sc2ySwM_344.2923 Anthoceros agrestis HOM05D005558 ORTHO05D006832 3.6e-15 85.9 78 53.8
Cre09.g396850 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D034498 9.9e-13 77.8 141 36.2
PRCOL_00001425 Prasinoderma coloniale HOM05D005558 ORTHO05D006832 1.7e-12 77.0 151 31.1
Cpa.g.sc36.94 Carica papaya HOM05D005558 ORTHO05D006832 2.1e-10 70.1 83 45.8
DCAR_022964 Daucus carota HOM05D005558 ORTHO05D006832 3.0e-09 66.2 64 54.7
Cpa.g.sc36.93 Carica papaya HOM05D005558 ORTHO05D006832 1.9e-08 63.5 30 83.3
EL10Ac3g07438 Beta vulgaris HOM05D000371 ORTHO05D013217 4.0e-06 55.8 33 66.7


User provided reference genes

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