Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8B7JRK Arachis hypogaea HOM05D008512 ORTHO05D007522 1.3e-165 586.3 286 100.0
arahy.Tifrunner.gnm1.ann1.8SNE72 Arachis hypogaea HOM05D000045 ORTHO05D007522 3.9e-61 239.2 229 53.7
arahy.Tifrunner.gnm1.ann1.Z72PVB Arachis hypogaea HOM05D008512 ORTHO05D007522 1.9e-55 220.3 315 41.0
arahy.Tifrunner.gnm1.ann1.R9E33Q Arachis hypogaea HOM05D008512 ORTHO05D007522 7.2e-47 191.8 267 40.4
arahy.Tifrunner.gnm1.ann1.QD7BCG Arachis hypogaea HOM05D008512 ORTHO05D007522 1.4e-42 177.6 231 44.6
arahy.Tifrunner.gnm1.ann1.9K8J5U Arachis hypogaea HOM05D008512 ORTHO05D007522 1.2e-30 137.9 161 42.9
arahy.Tifrunner.gnm1.ann1.UCM082 Arachis hypogaea HOM05D008512 ORTHO05D007522 1.6e-30 137.5 176 44.3
TPR.G2699 Trifolium pratense HOM05D000045 ORTHO05D000067 4.7e-30 136.0 186 40.9
TPR.G29715 Trifolium pratense HOM05D000045 ORTHO05D007522 1.5e-28 131.0 171 40.9
Medtr1g070355 Medicago truncatula HOM05D000045 ORTHO05D007522 5.7e-28 129.0 185 39.5
TPR.G37658 Trifolium pratense HOM05D000045 ORTHO05D000067 3.7e-27 126.3 184 35.9
arahy.Tifrunner.gnm1.ann1.9P3T0C Arachis hypogaea HOM05D008512 ORTHO05D007522 1.6e-25 120.9 113 57.5
Medtr6g022080 Medicago truncatula HOM05D015175 ORTHO05D007522 4.5e-25 119.4 201 37.3
Lj2g0009070 Lotus japonicus HOM05D000045 ORTHO05D000067 3.8e-24 116.3 186 36.6
arahy.Tifrunner.gnm1.ann1.YBV6T8 Arachis hypogaea HOM05D008512 ORTHO05D007522 5.0e-24 115.9 268 30.6
Glyma.10G121700 Glycine max HOM05D000045 ORTHO05D000067 1.9e-23 114.0 216 33.8
Lj1g0017039 Lotus japonicus HOM05D000045 ORTHO05D007522 4.2e-23 112.8 187 33.2
arahy.Tifrunner.gnm1.ann1.8E2LYN Arachis hypogaea HOM05D008512 ORTHO05D007522 5.5e-23 112.5 131 49.6
arahy.Tifrunner.gnm1.ann1.Z9H0PS Arachis hypogaea HOM05D000045 ORTHO05D000067 7.2e-23 112.1 203 34.5
arahy.Tifrunner.gnm1.ann1.8433TV Arachis hypogaea HOM05D010283 ORTHO05D013006 9.4e-23 111.7 177 36.7
Medtr5g076070 Medicago truncatula HOM05D000045 ORTHO05D007522 1.2e-22 111.3 199 36.7
TPR.G21949 Trifolium pratense HOM05D008512 ORTHO05D007522 1.2e-22 111.3 146 41.1
Lj6g0007124 Lotus japonicus HOM05D000045 ORTHO05D000067 2.1e-22 110.5 181 33.7
Lj2g0009580 Lotus japonicus HOM05D000045 ORTHO05D007522 3.6e-22 109.8 187 34.8
arahy.Tifrunner.gnm1.ann1.VI37WY Arachis hypogaea HOM05D000045 ORTHO05D007522 6.1e-22 109.0 203 33.5
Lj1g0021005 Lotus japonicus HOM05D000045 ORTHO05D007522 1.0e-21 108.2 187 34.8
TPR.G39767 Trifolium pratense HOM05D000045 ORTHO05D007522 1.0e-21 108.2 218 32.1
arahy.Tifrunner.gnm1.ann1.E92V9Y Arachis hypogaea HOM05D000045 ORTHO05D013006 2.3e-21 107.1 177 36.2
Lj1g0023623 Lotus japonicus HOM05D000045 ORTHO05D007522 8.8e-21 105.1 191 33.0
Lj1g0004807 Lotus japonicus HOM05D000045 ORTHO05D000067 1.2e-20 104.8 186 32.8
Medtr2g101460 Medicago truncatula HOM05D008512 ORTHO05D007522 2.6e-20 103.6 129 39.5
arahy.Tifrunner.gnm1.ann1.N9AV22 Arachis hypogaea HOM05D010283 ORTHO05D013006 3.4e-20 103.2 192 34.9
arahy.Tifrunner.gnm1.ann1.MU2UU0 Arachis hypogaea HOM05D010283 ORTHO05D013006 5.7e-20 102.4 172 36.0
Lj4g0021877 Lotus japonicus HOM05D000045 ORTHO05D000067 9.8e-20 101.7 226 29.6
Glyma.18G179400 Glycine max HOM05D000045 ORTHO05D000067 6.3e-19 99.0 216 31.5
Lj4g0016999 Lotus japonicus HOM05D000045 ORTHO05D007522 6.3e-19 99.0 177 33.3
arahy.Tifrunner.gnm1.ann1.ZHL4EB Arachis hypogaea HOM05D040013 ORTHO05D086939 1.8e-18 97.4 60 75.0
arahy.Tifrunner.gnm1.ann1.TE7QLE Arachis hypogaea HOM05D008512 ORTHO05D007522 4.1e-18 96.3 92 52.2
arahy.Tifrunner.gnm1.ann1.B1FH48 Arachis hypogaea HOM05D008512 ORTHO05D007522 9.1e-18 95.1 265 29.1
Medtr1g052260 Medicago truncatula HOM05D008512 ORTHO05D007522 1.2e-17 94.7 113 41.6
arahy.Tifrunner.gnm1.ann1.G6Y5VA Arachis hypogaea HOM05D000045 ORTHO05D000067 1.6e-17 94.4 182 34.1
Medtr3g448650 Medicago truncatula HOM05D008512 ORTHO05D007522 3.5e-17 93.2 103 43.7
TPR.G9983 Trifolium pratense HOM05D000045 ORTHO05D007522 3.5e-17 93.2 212 26.4
arahy.Tifrunner.gnm1.ann1.F5GNIQ Arachis hypogaea HOM05D008512 ORTHO05D007522 4.5e-17 92.8 96 52.1
TPR.G36052 Trifolium pratense HOM05D000045 ORTHO05D007522 5.9e-17 92.4 157 33.1
LjContig00413g0001833 Lotus japonicus HOM05D014238 ORTHO05D015703 1.0e-16 91.7 125 36.0
Glyma.06G229800 Glycine max HOM05D000045 ORTHO05D007522 1.9e-15 87.4 220 28.2
Psat3g144480 Pisum sativum HOM05D016394 ORTHO05D007522 3.6e-14 83.2 227 26.0
Lj3g0025415 Lotus japonicus HOM05D000045 ORTHO05D007522 4.7e-14 82.8 231 27.7
LjContig00302g0011664 Lotus japonicus HOM05D000045 ORTHO05D007522 4.7e-14 82.8 231 27.7
arahy.Tifrunner.gnm1.ann1.JK56KQ Arachis hypogaea HOM05D008512 ORTHO05D007522 8.0e-14 82.0 68 60.3
TPR.G17630 Trifolium pratense HOM05D000045 ORTHO05D000067 1.0e-13 81.6 203 26.6
TPR.G9519 Trifolium pratense HOM05D000045 ORTHO05D000067 1.4e-13 81.3 136 36.8
arahy.Tifrunner.gnm1.ann1.S6N93B Arachis hypogaea HOM05D008512 ORTHO05D007522 2.3e-13 80.5 55 69.1
arahy.Tifrunner.gnm1.ann1.CA2PKU Arachis hypogaea HOM05D008512 ORTHO05D007522 8.8e-13 78.6 55 69.1
arahy.Tifrunner.gnm1.ann1.69IBBL Arachis hypogaea HOM05D008512 ORTHO05D007522 3.4e-12 76.6 55 65.5
TPR.G9165 Trifolium pratense HOM05D000045 ORTHO05D007522 3.4e-12 76.6 99 43.4
TPR.G600 Trifolium pratense HOM05D000045 ORTHO05D007522 5.7e-12 75.9 136 31.6
Lj3g0000730 Lotus japonicus HOM05D000045 ORTHO05D010597 9.8e-12 75.1 166 27.7
Lj6g0017880 Lotus japonicus HOM05D000045 ORTHO05D007522 1.3e-11 74.7 155 29.7
Atru.chr8.2 Acer truncatum HOM05D000045 ORTHO05D010597 1.7e-11 74.3 170 28.2
Lj1g0005898 Lotus japonicus HOM05D014238 ORTHO05D015703 2.2e-11 73.9 95 40.0
arahy.Tifrunner.gnm1.ann1.70KCRG Arachis hypogaea HOM05D000045 ORTHO05D007522 3.7e-11 73.2 124 34.7
Medtr6g053140 Medicago truncatula HOM05D015175 ORTHO05D007522 3.7e-11 73.2 151 31.8
Glyma.01G202900 Glycine max HOM05D000045 ORTHO05D000067 4.9e-11 72.8 211 30.3
arahy.Tifrunner.gnm1.ann1.E3T4X8 Arachis hypogaea HOM05D008512 ORTHO05D007522 6.3e-11 72.4 58 56.9
Glyma.12G011500 Glycine max HOM05D010283 ORTHO05D007522 6.3e-11 72.4 114 36.8
Lj1g0001785 Lotus japonicus HOM05D000045 ORTHO05D007788 6.3e-11 72.4 241 25.3
Lj4g0015383 Lotus japonicus HOM05D000045 ORTHO05D000067 6.3e-11 72.4 241 25.3
arahy.Tifrunner.gnm1.ann1.TRAW4Z Arachis hypogaea HOM05D008512 ORTHO05D007522 1.4e-10 71.2 69 44.9
Glyma.13G000732 Glycine max HOM05D008512 ORTHO05D007522 1.4e-10 71.2 146 33.6
Lj1g0011931 Lotus japonicus HOM05D012399 ORTHO05D007522 1.8e-10 70.9 109 35.8
arahy.Tifrunner.gnm1.ann1.EF5TAI Arachis hypogaea HOM05D008512 ORTHO05D007522 2.4e-10 70.5 58 55.2
arahy.Tifrunner.gnm1.ann1.YW1VBX Arachis hypogaea HOM05D008512 ORTHO05D007522 3.1e-10 70.1 77 42.9
arahy.Tifrunner.gnm1.ann1.4IQ1UB Arachis hypogaea HOM05D008512 ORTHO05D007522 4.1e-10 69.7 58 55.2
Ca_25023_v3 Cicer arietinum L. HOM05D000045 ORTHO05D000067 5.4e-10 69.3 234 26.5
Ciclev10027335m.g Citrus clementina HOM05D000045 ORTHO05D000611 5.4e-10 69.3 204 27.5
arahy.Tifrunner.gnm1.ann1.QHJZ1I Arachis hypogaea HOM05D008512 ORTHO05D007522 7.0e-10 68.9 55 58.2
TPR.G9545 Trifolium pratense HOM05D000045 ORTHO05D000067 7.0e-10 68.9 169 30.8
Lj3g0023941 Lotus japonicus HOM05D005194 ORTHO05D003357 9.2e-10 68.6 225 25.8
Prupe.7G188000 Prunus persica HOM05D000045 ORTHO05D000067 9.2e-10 68.6 160 31.2
ATR0594G149 Amborella trichopoda HOM05D000045 ORTHO05D000611 1.2e-09 68.2 221 25.8
Glyma.13G024651 Glycine max HOM05D000045 ORTHO05D000067 1.2e-09 68.2 91 37.4
Medtr7g028855 Medicago truncatula HOM05D005194 ORTHO05D009139 1.2e-09 68.2 173 27.7
Rhsim05G0138000 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.6e-09 67.8 165 29.7
Ciclev10024536m.g Citrus clementina HOM05D000045 ORTHO05D000067 2.0e-09 67.4 144 31.2
arahy.Tifrunner.gnm1.ann1.09H02D Arachis hypogaea HOM05D000045 ORTHO05D007522 2.7e-09 67.0 54 55.6
Lj1g0005830 Lotus japonicus HOM05D000045 ORTHO05D003357 3.5e-09 66.6 170 27.6
Psat6g085800 Pisum sativum HOM05D021955 ORTHO05D007522 3.5e-09 66.6 80 42.5
Lj1g0014168 Lotus japonicus HOM05D004644 ORTHO05D007522 5.9e-09 65.9 105 35.2
Lj3g0015805 Lotus japonicus HOM05D005194 ORTHO05D003357 5.9e-09 65.9 155 29.7
Lj6g0018942 Lotus japonicus HOM05D000045 ORTHO05D000067 5.9e-09 65.9 170 27.6
LjContig00126g0012758 Lotus japonicus HOM05D000045 ORTHO05D000067 5.9e-09 65.9 170 27.6
TPR.G24615 Trifolium pratense HOM05D000045 ORTHO05D000067 7.8e-09 65.5 173 28.3
TPR.G36375 Trifolium pratense HOM05D012399 ORTHO05D007522 7.8e-09 65.5 105 30.5
Lj4g0003455 Lotus japonicus HOM05D000045 ORTHO05D003357 1.0e-08 65.1 163 28.8
Rhsim04G0145900 Rhododendron simsii HOM05D000045 ORTHO05D003665 1.0e-08 65.1 211 27.0
HPP92_009461 Vanilla planifolia HOM05D000045 ORTHO05D000067 1.0e-08 65.1 134 34.3
Lj5g0006079 Lotus japonicus HOM05D000045 ORTHO05D003357 1.3e-08 64.7 181 28.2
COL.COLO4_20785 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.7e-08 64.3 163 28.8
Rhsim09G0031000 Rhododendron simsii HOM05D000045 ORTHO05D012126 1.7e-08 64.3 165 29.1
Os07g0563600 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 2.3e-08 63.9 167 31.1
Lj6g0005500 Lotus japonicus HOM05D009753 ORTHO05D010597 2.9e-08 63.5 250 24.8
CSS0024773 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.0e-08 62.8 145 26.2
Lj5g0011132 Lotus japonicus HOM05D009753 ORTHO05D010597 5.0e-08 62.8 250 24.8
TPR.G3230 Trifolium pratense HOM05D000045 ORTHO05D010597 5.0e-08 62.8 169 29.0
arahy.Tifrunner.gnm1.ann1.U80MXJ Arachis hypogaea HOM05D000045 ORTHO05D000067 6.6e-08 62.4 167 28.1
COL.COLO4_24493 Corchorus olitorius HOM05D000045 ORTHO05D000067 6.6e-08 62.4 138 31.9
Rhsim02G0126700 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.6e-08 62.4 127 31.5
Lj3g0002255 Lotus japonicus HOM05D005194 ORTHO05D003357 8.6e-08 62.0 177 26.6
Rhsim02G0127400 Rhododendron simsii HOM05D000045 ORTHO05D003357 8.6e-08 62.0 137 35.0
TPR.G5153 Trifolium pratense HOM05D000045 ORTHO05D010597 8.6e-08 62.0 173 28.3
RhsimUnG0130200 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-07 61.6 127 32.3
COL.COLO4_23634 Corchorus olitorius HOM05D000045 ORTHO05D000611 1.5e-07 61.2 118 36.4
COL.COLO4_25133 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.5e-07 61.2 138 31.9
Nitab4.5_0000235g0050 Nicotiana tabacum HOM05D000045 ORTHO05D000067 1.9e-07 60.8 212 27.8
Lj6g0009990 Lotus japonicus HOM05D005194 ORTHO05D003357 3.3e-07 60.1 113 33.6
TWI14G0041 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.3e-07 60.1 177 23.7
TWI34G0270 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.3e-07 60.1 177 23.7
TWI34G0717 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.3e-07 60.1 177 23.7
Ciclev10023561m.g Citrus clementina HOM05D000045 ORTHO05D000067 4.3e-07 59.7 145 26.9
Medtr0604s0020 Medicago truncatula HOM05D008512 ORTHO05D007522 4.3e-07 59.7 73 43.8
Nitab4.5_0011601g0010 Nicotiana tabacum HOM05D000045 ORTHO05D000067 4.3e-07 59.7 226 27.4
arahy.Tifrunner.gnm1.ann1.52VG2X Arachis hypogaea HOM05D000045 ORTHO05D000067 5.6e-07 59.3 55 47.3
Medtr7g446520 Medicago truncatula HOM05D000045 ORTHO05D009139 5.6e-07 59.3 167 26.3
TPR.G18639 Trifolium pratense HOM05D000045 ORTHO05D000067 5.6e-07 59.3 152 27.0
CSS0046475 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.3e-07 58.9 110 30.9
Ciclev10018266m.g Citrus clementina HOM05D005194 ORTHO05D010597 7.3e-07 58.9 152 30.3
Lj3g0010458 Lotus japonicus HOM05D009753 ORTHO05D010597 9.5e-07 58.5 191 26.7
Carub.0007s0007 Capsella rubella HOM05D000045 ORTHO05D000067 1.2e-06 58.2 152 27.6
Lj1g0009739 Lotus japonicus HOM05D009753 ORTHO05D010597 1.2e-06 58.2 191 26.7
Lj6g0002047 Lotus japonicus HOM05D009753 ORTHO05D010597 1.2e-06 58.2 195 26.2
MBI16_g26738_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000611 1.2e-06 58.2 136 30.1
Lj2g0023561 Lotus japonicus HOM05D000045 ORTHO05D000067 1.6e-06 57.8 127 29.9
Lj4g0026339 Lotus japonicus HOM05D009753 ORTHO05D010597 2.1e-06 57.4 191 26.7
RhsimUnG0134500 Rhododendron simsii HOM05D000045 ORTHO05D000611 2.1e-06 57.4 106 38.7
RhsimUnG0143200 Rhododendron simsii HOM05D000045 ORTHO05D000611 2.1e-06 57.4 106 38.7
Lj2g0019596 Lotus japonicus HOM05D009753 ORTHO05D003357 2.8e-06 57.0 191 26.2
Lj5g0000269 Lotus japonicus HOM05D009753 ORTHO05D010597 2.8e-06 57.0 191 26.7
TPR.G39336 Trifolium pratense HOM05D000045 ORTHO05D007522 2.8e-06 57.0 60 41.7
TPR.G939 Trifolium pratense HOM05D008512 ORTHO05D007522 2.8e-06 57.0 60 41.7
TWI38G0833 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.8e-06 57.0 177 23.2
arahy.Tifrunner.gnm1.ann1.G9PNZX Arachis hypogaea HOM05D008512 ORTHO05D007522 3.6e-06 56.6 37 62.2
Lj5g0009547 Lotus japonicus HOM05D012399 ORTHO05D007522 3.6e-06 56.6 217 24.9
Rhsim09G0080800 Rhododendron simsii HOM05D000045 ORTHO05D011270 3.6e-06 56.6 149 26.2
arahy.Tifrunner.gnm1.ann1.7B21NV Arachis hypogaea HOM05D008512 ORTHO05D007522 4.7e-06 56.2 41 65.9
Gohir.A09G032100 Gossypium hirsutum HOM05D000045 ORTHO05D000067 4.7e-06 56.2 138 29.0
MBI18_g14308_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000067 4.7e-06 56.2 96 35.4
arahy.Tifrunner.gnm1.ann1.W8SRLW Arachis hypogaea HOM05D000045 ORTHO05D007522 6.1e-06 55.8 112 34.8
TPR.G40266 Trifolium pratense HOM05D000045 ORTHO05D007522 6.1e-06 55.8 139 30.2
EL10Ac9g21561 Beta vulgaris HOM05D000045 ORTHO05D000067 8.0e-06 55.5 164 26.2


User provided reference genes

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