Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 6.7e-215 750.4 368 100.0
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 1.4e-212 742.7 368 98.9
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 4.3e-169 598.2 361 81.4
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 1.2e-168 596.7 360 81.1
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 3.6e-168 595.1 358 81.3
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 1.8e-167 592.8 359 81.3
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 2.3e-167 592.4 360 80.8
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 2.2e-165 585.9 364 79.1
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.4e-164 583.2 359 79.7
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 2.1e-163 579.3 359 78.8
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 1.2e-147 526.9 360 71.4
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.7e-146 523.1 363 70.5
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 5.1e-146 521.5 363 70.5
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 1.1e-145 520.4 364 70.3
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 3.3e-145 518.8 363 68.6
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 9.6e-145 517.3 364 68.7
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 6.2e-144 514.6 359 69.1
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 3.1e-143 512.3 363 68.0
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 3.1e-143 512.3 359 70.2
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 4.0e-143 511.9 405 64.0
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 1.2e-142 510.4 362 69.6
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 2.0e-142 509.6 362 69.3
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 2.6e-142 509.2 364 68.7
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 3.4e-142 508.8 364 67.9
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 4.5e-142 508.4 363 68.3
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.3e-141 506.9 362 69.3
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 8.4e-141 504.2 362 68.8
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.1e-140 503.8 362 68.0
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.4e-140 502.7 362 68.0
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 2.7e-139 499.2 362 68.8
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 1.3e-138 496.9 359 68.5
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 6.7e-138 494.6 361 67.0
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 4.3e-137 491.9 359 68.8
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 4.3e-137 491.9 360 66.1
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 5.6e-137 491.5 362 67.4
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.3e-136 490.3 361 66.2
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.3e-136 490.3 361 66.2
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 1.3e-136 490.3 362 68.0
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 3.7e-136 488.8 356 68.3
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.4e-135 486.9 356 67.4
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 1.4e-135 486.9 359 66.9
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 7.6e-134 481.1 361 65.1
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 1.3e-133 480.3 370 63.5
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 1.3e-133 480.3 308 78.2
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 1.7e-133 479.9 355 65.9
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 2.2e-133 479.6 363 65.0
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 2.9e-133 479.2 365 63.8
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 1.1e-132 477.2 361 66.5
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 3.2e-132 475.7 361 65.9
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 3.2e-132 475.7 359 63.8
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 5.5e-132 474.9 363 63.6
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 1.2e-131 473.8 361 65.9
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 2.1e-131 473.0 361 65.9
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 1.0e-130 470.7 394 60.9
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.0e-130 470.7 338 68.0
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 6.7e-130 468.0 361 64.0
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 8.7e-130 467.6 362 64.1
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 8.7e-130 467.6 380 62.1
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 2.5e-129 466.1 361 63.7
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 5.6e-129 464.9 355 63.7
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 7.4e-129 464.5 365 61.6
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 2.8e-128 462.6 361 62.9
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 1.1e-127 460.7 364 62.4
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.8e-127 459.9 360 62.5
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 2.4e-127 459.5 355 63.4
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 4.0e-127 458.8 366 62.6
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 6.9e-127 458.0 357 62.2
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 9.0e-127 457.6 361 62.3
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 1.5e-126 456.8 361 62.3
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 4.5e-126 455.3 339 65.8
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 4.5e-126 455.3 356 63.2
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 1.3e-125 453.8 360 63.1
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 2.2e-125 453.0 362 62.2
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 2.2e-125 453.0 362 62.2
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 1.1e-124 450.7 356 62.4
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 1.4e-124 450.3 271 83.0
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 9.3e-124 447.6 362 60.2
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 1.2e-123 447.2 363 60.9
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 2.1e-123 446.4 357 61.1
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 1.3e-122 443.7 355 59.7
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 8.7e-122 441.0 356 62.6
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.5e-121 440.3 356 62.1
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 5.7e-121 438.3 356 62.4
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 2.1e-115 419.9 361 60.4
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 1.7e-112 410.2 365 59.5
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 3.7e-112 409.1 361 56.8
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 1.4e-111 407.1 363 56.2
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 3.1e-111 406.0 285 70.5
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 3.4e-110 402.5 311 64.6
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 3.4e-110 402.5 355 56.9
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 4.5e-110 402.1 340 61.5
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.0e-109 401.0 288 69.4
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 9.4e-108 394.4 355 56.3
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 1.4e-106 390.6 287 68.3
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 3.0e-106 389.4 383 53.0
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 1.5e-105 387.1 361 56.5
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 1.5e-105 387.1 359 52.6
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 3.3e-105 386.0 265 71.3
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 2.8e-104 382.9 363 54.0
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 2.4e-103 379.8 236 82.2
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 4.1e-103 379.0 367 54.8
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 2.6e-102 376.3 361 56.8
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 1.3e-93 347.4 250 69.6
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 3.8e-93 345.9 335 56.4
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 9.4e-92 341.3 359 53.2
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 4.1e-87 325.9 282 58.2
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 1.7e-85 320.5 228 68.4
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 1.5e-81 307.4 324 51.5
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 7.5e-81 305.1 365 46.0
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 2.4e-79 300.1 227 63.9
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 4.1e-79 299.3 356 43.0
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 3.8e-77 292.7 342 44.4
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 1.2e-73 281.2 344 43.0
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 1.7e-64 250.8 193 61.7
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 3.7e-64 249.6 381 36.5
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 3.9e-53 213.0 166 64.5
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.9e-52 210.7 174 59.8
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 4.7e-35 152.9 121 62.8
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 6.4e-32 142.5 91 71.4
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.1e-30 137.5 197 43.7
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 1.7e-29 134.4 107 61.7
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 3.0e-29 133.7 103 70.9
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 2.9e-16 90.5 77 58.4
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 2.3e-13 80.9 48 72.9
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 4.8e-11 73.2 147 34.7


User provided reference genes

Program Settings