Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 0.0e+00 1101.3 523 100.0
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 0.0e+00 1083.6 527 98.1
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 1.5e-236 822.8 522 76.8
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 7.8e-233 810.4 523 75.0
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 1.9e-226 789.3 528 72.5
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 1.3e-224 783.1 528 71.4
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 1.1e-221 773.5 528 70.8
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.6e-215 751.1 521 69.3
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.6e-215 751.1 520 69.4
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.6e-215 751.1 520 69.4
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 9.6e-215 750.4 520 69.2
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.4e-213 746.5 521 68.9
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 1.8e-213 746.1 528 68.9
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.3e-211 740.0 532 67.7
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 2.9e-211 738.8 503 69.8
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 2.9e-211 738.8 520 67.3
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 1.1e-210 736.9 519 67.8
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.4e-210 736.5 520 67.5
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 4.2e-210 734.9 514 69.5
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 5.4e-210 734.6 523 67.7
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 9.3e-210 733.8 533 67.2
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 4.6e-209 731.5 521 69.1
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.7e-208 729.6 520 66.7
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 1.7e-208 729.6 524 66.6
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 6.6e-208 727.6 516 68.0
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.5e-207 726.5 520 66.3
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.5e-207 725.7 520 66.3
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 3.3e-207 725.3 513 69.0
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 4.3e-207 724.9 520 66.2
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 5.6e-207 724.5 528 66.1
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 5.6e-207 724.5 522 65.7
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 9.6e-207 723.8 520 66.3
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 1.6e-206 723.0 513 68.4
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 4.8e-206 721.5 524 66.2
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 8.1e-206 720.7 513 66.1
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 1.8e-205 719.5 522 65.3
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 3.1e-205 718.8 524 67.6
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 4.0e-205 718.4 523 65.4
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 6.9e-205 717.6 517 65.8
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 1.2e-204 716.8 527 65.5
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 1.5e-204 716.5 521 65.3
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 2.0e-204 716.1 520 65.6
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 4.5e-204 714.9 514 65.0
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 4.5e-204 714.9 503 67.2
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 4.5e-204 714.9 513 65.5
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 4.5e-204 714.9 526 65.4
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 1.3e-203 713.4 513 64.9
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 1.7e-203 713.0 525 65.0
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 2.9e-203 712.2 513 65.3
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 6.4e-203 711.1 525 65.0
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 8.4e-203 710.7 511 65.6
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 2.4e-202 709.1 514 65.6
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 3.2e-202 708.8 531 65.2
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 7.1e-202 707.6 525 65.0
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 7.1e-202 707.6 524 66.0
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 9.3e-202 707.2 514 64.2
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 1.2e-201 706.8 513 63.9
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 2.1e-201 706.1 527 63.8
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 2.1e-201 706.1 530 64.2
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 2.7e-201 705.7 513 63.9
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 4.6e-201 704.9 520 66.3
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 7.9e-201 704.1 505 67.1
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 1.3e-200 703.4 512 64.1
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 1.3e-200 703.4 512 64.1
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 1.3e-200 703.4 516 66.7
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 3.9e-200 701.8 512 63.7
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 3.9e-200 701.8 517 65.2
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 3.9e-200 701.8 523 66.2
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 1.1e-199 700.3 523 64.6
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 1.5e-199 699.9 523 64.6
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 1.9e-199 699.5 527 64.7
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 4.3e-199 698.4 515 65.2
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 4.3e-199 698.4 546 61.5
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 7.4e-199 697.6 532 63.0
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 4.8e-198 694.9 499 66.3
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 4.0e-197 691.8 531 62.5
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 2.0e-196 689.5 502 65.1
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 6.4e-195 684.5 525 64.0
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 5.5e-194 681.4 593 57.2
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 2.1e-193 679.5 527 63.9
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 6.0e-193 677.9 518 61.8
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 1.0e-192 677.2 504 63.5
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 1.0e-192 677.2 504 63.5
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 3.3e-191 672.2 520 61.5
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 3.7e-190 668.7 517 62.9
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 6.5e-187 657.9 527 62.6
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 1.6e-185 653.3 471 66.2
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 5.1e-184 648.3 508 61.8
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 6.7e-184 647.9 530 62.6
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 6.7e-184 647.9 526 60.3
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 2.4e-181 639.4 502 62.2
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 2.5e-178 629.4 423 73.3
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 3.6e-177 625.5 509 60.7
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 1.7e-174 616.7 538 58.4
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 1.7e-174 616.7 532 56.4
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 1.3e-171 607.1 475 61.9
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 1.4e-170 603.6 516 59.5
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 8.8e-168 594.3 452 64.4
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 2.8e-166 589.3 527 55.8
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 5.9e-164 581.6 523 55.3
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 1.0e-163 580.9 372 73.1
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 8.5e-155 551.2 379 68.3
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 3.4e-143 512.7 261 92.3
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 1.7e-118 430.6 400 52.2
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 7.3e-114 415.2 403 49.6
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 1.6e-113 414.1 392 50.5
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 1.3e-110 404.4 382 50.8
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 2.4e-104 383.6 399 46.9
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.3e-73 281.6 168 74.4
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 3.7e-57 226.9 120 87.5
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 3.0e-51 207.2 181 53.6
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 1.3e-33 148.7 314 29.0
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 2.5e-29 134.4 131 55.0
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 1.2e-28 132.1 130 51.5
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 4.9e-17 93.6 84 47.6
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 2.3e-14 84.7 54 64.8
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 5.8e-10 70.1 71 43.7
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 5.8e-10 70.1 71 43.7
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 5.8e-10 70.1 71 43.7
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 1.3e-09 68.9 73 41.1
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 8.3e-09 66.2 58 43.1
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 2.3e-06 58.2 99 28.3


User provided reference genes

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