Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.7e-184 648.7 360 100.0
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 6.0e-184 647.5 360 99.4
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 6.7e-159 564.3 360 84.7
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 7.4e-158 560.8 361 85.9
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 6.9e-156 554.3 360 81.4
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.2e-155 553.5 360 74.7
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 5.9e-155 551.2 361 84.5
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 7.7e-155 550.8 360 84.7
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 6.5e-154 547.7 360 75.8
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 3.2e-153 545.4 360 73.3
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 7.2e-153 544.3 360 72.2
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 2.1e-152 542.7 360 79.2
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 1.4e-151 540.0 360 75.6
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 1.8e-151 539.7 360 79.4
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 7.4e-150 534.3 360 69.4
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 1.7e-149 533.1 360 71.9
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 2.8e-149 532.3 365 80.3
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 8.2e-149 530.8 360 74.4
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 1.1e-148 530.4 360 68.1
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 1.4e-148 530.0 360 73.9
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 1.8e-148 529.6 360 76.4
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 2.4e-148 529.3 360 69.2
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 4.1e-148 528.5 360 68.9
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 5.3e-148 528.1 360 69.4
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 9.1e-148 527.3 360 69.4
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 1.5e-147 526.6 360 69.2
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 1.5e-147 526.6 360 75.8
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 1.5e-147 526.6 360 71.4
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.5e-147 526.6 360 69.2
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 2.0e-147 526.2 360 70.8
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 2.0e-147 526.2 360 77.2
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 4.5e-147 525.0 360 70.3
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 4.5e-147 525.0 360 73.3
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 4.5e-147 525.0 360 75.8
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 5.9e-147 524.6 360 68.9
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 7.7e-147 524.2 360 67.2
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 7.7e-147 524.2 360 70.3
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 7.7e-147 524.2 361 69.8
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 7.7e-147 524.2 360 76.1
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 7.7e-147 524.2 360 74.2
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 1.0e-146 523.9 361 67.9
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 1.0e-146 523.9 360 68.9
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 1.3e-146 523.5 360 72.8
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 1.7e-146 523.1 361 67.9
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.7e-146 523.1 360 67.8
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 2.2e-146 522.7 363 74.7
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 2.9e-146 522.3 360 68.6
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 3.8e-146 521.9 360 71.9
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 3.8e-146 521.9 360 73.1
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.5e-146 521.2 360 69.2
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 8.5e-146 520.8 360 68.9
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 8.5e-146 520.8 360 74.2
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 8.5e-146 520.8 360 68.9
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 8.5e-146 520.8 360 68.3
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 8.5e-146 520.8 360 74.4
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 1.4e-145 520.0 360 67.5
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.9e-145 519.6 360 73.9
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 3.2e-145 518.8 363 74.7
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 3.2e-145 518.8 360 68.1
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 3.2e-145 518.8 360 70.3
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 4.2e-145 518.5 360 68.3
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 5.5e-145 518.1 360 69.7
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 7.2e-145 517.7 360 68.1
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 7.2e-145 517.7 360 67.8
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 1.2e-144 516.9 360 67.5
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.2e-144 516.9 360 67.8
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 1.6e-144 516.5 360 76.1
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 6.1e-144 514.6 360 66.4
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 7.9e-144 514.2 360 68.3
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.4e-143 513.5 360 68.1
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 1.8e-143 513.1 360 67.8
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 3.9e-143 511.9 360 73.1
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 3.9e-143 511.9 360 74.7
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 5.1e-143 511.5 360 66.7
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 8.8e-143 510.8 360 71.1
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 3.3e-142 508.8 360 65.3
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 3.3e-142 508.8 360 71.7
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 5.7e-142 508.1 360 74.7
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 5.7e-142 508.1 360 68.9
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 1.7e-141 506.5 361 74.2
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 2.2e-141 506.1 354 73.2
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 2.8e-141 505.8 360 68.1
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 6.3e-141 504.6 360 65.3
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 6.3e-141 504.6 364 69.2
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 6.3e-141 504.6 360 65.6
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 8.2e-141 504.2 360 70.6
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 8.2e-141 504.2 360 70.3
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 1.8e-140 503.1 360 65.0
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 2.4e-140 502.7 361 66.5
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 3.1e-140 502.3 361 72.0
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 5.3e-140 501.5 360 64.4
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 1.5e-139 500.0 360 65.3
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 2.6e-139 499.2 361 65.7
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 2.6e-139 499.2 360 64.2
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 3.5e-139 498.8 360 67.8
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 3.5e-139 498.8 360 70.8
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 7.7e-139 497.7 360 64.4
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 1.3e-138 496.9 361 70.4
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 2.2e-138 496.1 360 69.4
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 2.9e-138 495.7 361 66.2
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 6.5e-138 494.6 367 64.0
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 1.1e-137 493.8 403 59.3
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 1.9e-137 493.0 360 63.3
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.2e-136 490.3 360 63.6
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 2.7e-136 489.2 360 64.2
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 3.6e-136 488.8 360 63.9
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 3.6e-136 488.8 360 63.3
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 4.7e-136 488.4 360 63.1
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 1.1e-134 483.8 360 67.5
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 2.8e-133 479.2 361 66.8
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 3.1e-132 475.7 360 63.6
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 1.6e-131 473.4 361 69.5
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 3.5e-131 472.2 361 61.2
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 4.5e-131 471.9 361 61.5
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.2e-128 463.8 361 60.1
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 2.1e-128 463.0 341 64.2
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 2.3e-127 459.5 361 61.8
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 3.0e-127 459.1 360 61.4
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 6.8e-127 458.0 367 58.9
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 4.8e-125 451.8 361 60.4
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 6.3e-125 451.4 353 61.2
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.4e-124 450.3 360 60.8
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 5.9e-123 444.9 363 58.1
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 7.7e-123 444.5 345 62.0
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 1.7e-122 443.4 360 58.6
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 5.5e-121 438.3 360 58.1
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 1.2e-120 437.2 360 59.2
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 3.6e-120 435.6 360 58.1
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.5e-118 430.3 309 74.8
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 9.8e-118 427.6 360 56.9
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 4.5e-115 418.7 306 69.0
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 6.6e-114 414.8 300 68.0
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 2.9e-106 389.4 303 65.0
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.9e-105 386.7 361 59.6
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 3.2e-100 369.4 331 58.0
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.2e-99 367.5 310 64.2
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 5.8e-94 348.6 360 50.6
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 1.3e-74 284.3 360 44.7
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.3e-74 283.5 217 68.2
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 2.1e-67 260.4 277 52.3
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 1.3e-66 257.7 253 53.8
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.1e-63 248.1 156 71.2
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 4.9e-61 239.2 123 91.9
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 4.9e-61 239.2 367 37.3
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 3.2e-60 236.5 126 89.7
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 2.7e-59 233.4 359 44.3
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 9.6e-57 224.9 179 66.5
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 7.6e-54 215.3 115 86.1
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.7e-35 153.7 106 76.4
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.3e-34 150.6 85 77.6
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.9e-34 149.8 85 76.5
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 3.9e-34 149.8 139 71.2
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.1e-34 149.4 85 76.5
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 9.7e-33 145.2 85 74.1
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 1.1e-31 141.7 171 43.9
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 1.0e-29 135.2 139 49.6
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 3.0e-26 123.6 195 37.4
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 8.2e-24 115.5 76 77.6
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 7.7e-22 109.0 58 87.9
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 8.5e-21 105.5 196 36.2
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 2.5e-20 104.0 63 74.6
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 7.2e-20 102.4 58 81.0
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 7.2e-20 102.4 58 81.0
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 1.6e-19 101.3 75 60.0
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 6.1e-19 99.4 133 36.1
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 8.8e-18 95.5 58 75.9
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 4.4e-17 93.2 60 73.3
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 7.5e-17 92.4 55 78.2
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.1e-15 88.6 67 62.7
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.8e-15 87.8 40 87.5
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 3.1e-15 87.0 64 65.6
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 7.7e-14 82.4 49 73.5
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 5.0e-13 79.7 75 50.7
arahy.Tifrunner.gnm1.ann1.5I9U23 Arachis hypogaea HOM05D003641 ORTHO05D085625 7.2e-12 75.9 120 57.5
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 4.0e-10 70.1 149 27.5
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 1.5e-09 68.2 87 44.8
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 5.7e-09 66.2 83 41.0
arahy.Tifrunner.gnm1.ann1.2S9N2F Arachis hypogaea HOM05D003641 ORTHO05D082440 1.1e-07 62.0 167 32.9
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.4e-07 61.6 50 56.0
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 1.4e-07 61.6 55 43.6
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 7.0e-07 59.3 158 25.3
MCO13G471 Micromonas commoda HOM05D003641 ORTHO05D049026 1.6e-06 58.2 174 25.3


User provided reference genes

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