Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.8474VB Arachis hypogaea HOM05D008094 ORTHO05D010082 5.7e-53 210.7 109 100.0
arahy.Tifrunner.gnm1.ann1.V5JGY8 Arachis hypogaea HOM05D008094 ORTHO05D010082 5.7e-53 210.7 109 100.0
arahy.Tifrunner.gnm1.ann1.4TXG74 Arachis hypogaea HOM05D008094 ORTHO05D010082 5.5e-48 194.1 113 92.9
Lalb_Chr15g0090761 Lupinus albus HOM05D008094 ORTHO05D010082 4.3e-16 88.2 146 46.6
Glyma.16G002700 Glycine max HOM05D008094 ORTHO05D010082 2.6e-13 79.0 104 55.8
Eucgr.I02770 Eucalyptus grandis HOM05D008094 ORTHO05D010082 1.3e-12 76.6 114 48.2
TPR.G2107 Trifolium pratense HOM05D008094 ORTHO05D010082 1.7e-12 76.3 152 41.4
Medtr2g005710 Medicago truncatula HOM05D008094 ORTHO05D010082 2.9e-12 75.5 96 50.0
Ca_00034_v3 Cicer arietinum L. HOM05D008094 ORTHO05D010082 3.7e-12 75.1 115 50.4
Cfa004482 Carpinus fangiana HOM05D008094 ORTHO05D010082 1.1e-11 73.6 111 47.7
Psat1g222640 Pisum sativum HOM05D008094 ORTHO05D010082 1.9e-11 72.8 104 51.0
Glyma.12G166400 Glycine max HOM05D008094 ORTHO05D010082 5.4e-11 71.2 112 49.1
Sabra03G0003200 Salix brachista HOM05D008094 ORTHO05D010082 5.4e-11 71.2 112 48.2
Ciclev10002589m.g Citrus clementina HOM05D008094 ORTHO05D010082 3.5e-10 68.6 94 50.0
Lj6g0003255 Lotus japonicus HOM05D008094 ORTHO05D010082 1.7e-09 66.2 55 69.1
QL02p100749 Quercus lobata HOM05D008094 ORTHO05D010082 2.3e-09 65.9 103 47.6
TAR628G1718 Trochodendron aralioides HOM05D008094 ORTHO05D010082 2.3e-09 65.9 99 46.5
COL.COLO4_17715 Corchorus olitorius HOM05D008094 ORTHO05D010082 3.0e-09 65.5 96 51.0
Prupe.1G579700 Prunus persica HOM05D008094 ORTHO05D010082 3.9e-09 65.1 99 49.5
DCAR_029178 Daucus carota HOM05D008094 ORTHO05D010082 5.0e-09 64.7 113 39.8
Oeu010208.1 Olea europaea HOM05D008094 ORTHO05D010082 5.0e-09 64.7 86 48.8
Manes.10G117000 Manihot esculenta HOM05D008094 ORTHO05D010082 6.6e-09 64.3 83 53.0
Rhsim05G0113700 Rhododendron simsii HOM05D008094 ORTHO05D010082 6.6e-09 64.3 115 42.6
Hma1.2p1_0633F.1_g192710 Hydrangea macrophylla HOM05D008094 ORTHO05D010082 1.5e-08 63.2 141 39.0
MBI03_g07689_MAGBIO Magnolia biondii HOM05D008094 ORTHO05D010082 2.5e-08 62.4 94 46.8
Thecc.02G017400 Theobroma cacao HOM05D008094 ORTHO05D010082 2.5e-08 62.4 91 51.6
CiPaw.06G174300 Carya illinoinensis HOM05D008094 ORTHO05D010082 3.3e-08 62.0 103 47.6
Nn3g18571 Nelumbo nucifera HOM05D008094 ORTHO05D010082 3.3e-08 62.0 102 47.1
Sed0001188 Sechium edule HOM05D008094 ORTHO05D010082 3.3e-08 62.0 84 51.2
ClCG10G007120 Citrullus lanatus HOM05D008094 ORTHO05D010082 4.3e-08 61.6 96 45.8
Aqoxy5G01193 Aquilegia oxysepala HOM05D008094 ORTHO05D010082 5.6e-08 61.2 102 42.2
Lsat_1_v5_gn_7_76841 Lactuca sativa HOM05D008094 ORTHO05D010082 5.6e-08 61.2 75 46.7
MELO3C016497.2 Cucumis melo HOM05D008094 ORTHO05D010082 7.3e-08 60.8 93 44.1
Dinv29599 Davidia involucrata HOM05D008094 ORTHO05D010082 7.3e-08 60.8 84 50.0
Nitab4.5_0006171g0010 Nicotiana tabacum HOM05D008094 ORTHO05D010082 7.3e-08 60.8 84 50.0
Nitab4.5_0000787g0100 Nicotiana tabacum HOM05D008094 ORTHO05D010082 1.2e-07 60.1 81 49.4
Sopen01g045830 Solanum pennellii HOM05D008094 ORTHO05D010082 1.6e-07 59.7 116 43.1
Potri.004G224600 Populus trichocarpa HOM05D008094 ORTHO05D010082 2.1e-07 59.3 92 48.9
Potri.003G006100 Populus trichocarpa HOM05D008094 ORTHO05D010082 3.6e-07 58.5 95 45.3
DCAR_001747 Daucus carota HOM05D008094 ORTHO05D010082 4.7e-07 58.2 114 37.7
CsaV3_3G006440 Cucumis sativus L. HOM05D008094 ORTHO05D010082 6.2e-07 57.8 102 41.2
Duzib132G1075 Durio zibethinus HOM05D008094 ORTHO05D010082 2.3e-06 55.8 90 50.0
Potri.019G078000 Populus trichocarpa HOM05D008094 ORTHO05D010082 2.3e-06 55.8 95 42.1
Solyc01g103470.2 Solanum lycopersicum HOM05D008094 ORTHO05D010082 4.0e-06 55.1 116 41.4
Nn1g09196 Nelumbo nucifera HOM05D008094 ORTHO05D010082 5.2e-06 54.7 99 40.4
PGSC0003DMG400024912 Solanum tuberosum HOM05D008094 ORTHO05D010082 8.9e-06 53.9 119 42.0


User provided reference genes

Program Settings