Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 5.5e-231 803.9 396 100.0
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 6.0e-201 704.1 396 89.9
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 2.5e-135 486.1 420 63.6
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 1.3e-123 447.2 398 63.6
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 1.3e-123 447.2 396 62.6
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 2.2e-123 446.4 396 62.1
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 2.9e-123 446.0 396 63.1
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 1.4e-122 443.7 396 63.6
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 7.2e-122 441.4 396 62.9
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 3.6e-121 439.1 398 63.3
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 6.7e-120 434.9 399 62.7
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 1.3e-118 430.6 398 62.1
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 2.1e-113 413.3 397 58.4
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 1.2e-111 407.5 396 56.6
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 1.5e-111 407.1 396 56.3
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 3.3e-111 406.0 396 55.8
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 3.3e-111 406.0 396 55.8
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 3.3e-111 406.0 396 57.1
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 7.5e-111 404.8 396 56.3
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.7e-110 403.7 396 56.3
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 4.1e-109 399.1 396 55.6
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 9.1e-109 397.9 396 55.3
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 1.6e-108 397.1 395 57.2
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 1.6e-108 397.1 415 54.5
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 1.6e-108 397.1 396 56.8
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 3.5e-108 396.0 396 54.3
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 5.9e-108 395.2 396 54.8
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 2.2e-107 393.3 396 54.8
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 6.5e-107 391.7 396 55.3
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 1.1e-106 391.0 396 54.5
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 1.1e-106 391.0 396 54.5
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 1.2e-105 387.5 400 56.2
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 2.7e-105 386.3 397 55.2
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 8.0e-105 384.8 396 54.5
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 5.2e-104 382.1 399 54.9
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 1.2e-103 380.9 397 53.4
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 3.4e-103 379.4 396 54.3
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 4.4e-103 379.0 396 53.0
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 5.7e-103 378.6 403 52.1
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 9.8e-103 377.9 396 53.5
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 9.8e-103 377.9 272 66.9
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 1.3e-102 377.5 399 52.6
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 1.3e-102 377.5 397 53.7
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.1e-101 374.4 399 52.9
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 5.4e-101 372.1 392 51.5
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 5.4e-101 372.1 272 68.4
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 3.5e-100 369.4 393 51.7
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 3.5e-100 369.4 394 51.3
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 7.7e-100 368.2 382 52.6
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 2.3e-99 366.7 271 66.1
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 2.3e-99 366.7 271 66.1
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 2.3e-99 366.7 393 51.7
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 5.5e-98 362.1 271 65.7
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 5.5e-98 362.1 271 65.7
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 5.5e-98 362.1 271 66.4
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 1.2e-97 360.9 271 65.7
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 1.2e-97 360.9 396 50.5
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 2.1e-97 360.1 271 66.1
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 6.1e-97 358.6 272 65.1
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 2.3e-96 356.7 273 66.3
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 4.0e-96 355.9 271 64.9
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 8.9e-96 354.8 396 51.5
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 1.3e-94 350.9 272 65.8
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 9.2e-93 344.7 394 47.5
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 2.0e-92 343.6 397 50.9
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 2.7e-92 343.2 394 47.2
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 2.3e-91 340.1 395 47.6
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 8.6e-91 338.2 396 47.2
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 9.5e-90 334.7 396 47.7
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 8.0e-89 331.6 272 59.6
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 9.8e-87 324.7 348 53.7
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 3.7e-86 322.8 272 58.8
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 1.9e-85 320.5 400 44.2
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 3.5e-84 316.2 398 47.0
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 1.3e-83 314.3 232 70.7
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 1.9e-82 310.5 271 59.4
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 3.1e-80 303.1 397 44.8
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 4.0e-80 302.8 396 46.0
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 4.9e-78 295.8 272 55.5
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 4.9e-78 295.8 272 57.4
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 6.4e-78 295.4 272 58.1
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 1.9e-77 293.9 298 56.4
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 1.8e-72 277.3 272 53.3
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 9.2e-69 265.0 350 48.3
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 7.8e-68 261.9 396 42.4
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 4.7e-65 252.7 292 50.7
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.8e-64 250.8 404 41.6
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 1.2e-63 248.1 277 45.5
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 3.2e-61 240.0 140 79.3
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 4.2e-61 239.6 137 81.0
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 4.2e-61 239.6 332 44.3
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 1.7e-59 234.2 263 43.7
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 4.3e-58 229.6 137 76.6
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 4.8e-57 226.1 159 69.2
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 1.9e-53 214.2 316 41.5
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.6e-49 201.1 234 47.0
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 4.9e-46 189.5 108 77.8
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 1.8e-43 181.0 126 76.2
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 8.7e-43 178.7 235 48.5
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 3.3e-42 176.8 109 68.8
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 7.4e-42 175.6 125 66.4
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 1.6e-41 174.5 117 78.6
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.6e-41 174.5 218 48.2
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 3.7e-41 173.3 218 49.1
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 1.2e-39 168.3 274 33.9
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 1.9e-37 161.0 218 47.2
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 2.5e-37 160.6 85 92.9
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 1.6e-36 157.9 108 79.6
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 4.6e-36 156.4 161 57.8
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 1.0e-35 155.2 94 77.7
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 3.9e-35 153.3 104 80.8
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 7.4e-34 149.1 106 64.2
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 7.4e-34 149.1 282 38.3
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 2.4e-32 144.1 75 94.7
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 3.4e-31 140.2 105 61.9
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 2.9e-30 137.1 215 43.3
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 2.9e-30 137.1 79 77.2
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 1.0e-27 128.6 102 70.6
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 1.0e-27 128.6 80 71.2
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 1.9e-26 124.4 283 30.0
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 3.3e-26 123.6 64 96.9
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 5.3e-24 116.3 75 81.3
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 3.2e-21 107.1 95 56.8
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 8.2e-17 92.4 110 38.2
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 1.1e-16 92.0 154 39.6
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 1.6e-12 78.2 96 43.8
Actinidia36057 Actinidia chinensis HOM05D006555 ORTHO05D008376 1.4e-08 65.1 283 24.4


User provided reference genes

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