Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 1.5e-43 179.1 92 100.0
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 4.5e-43 177.6 92 98.9
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 1.6e-32 142.5 89 77.5
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 3.6e-32 141.4 89 78.7
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 6.1e-32 140.6 89 77.5
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 6.1e-32 140.6 89 77.5
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 1.1e-28 129.8 89 69.7
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 1.4e-28 129.4 80 78.8
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 7.0e-28 127.1 85 70.6
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 7.0e-28 127.1 87 71.3
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 7.0e-28 127.1 80 76.2
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 9.1e-28 126.7 80 76.2
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 1.2e-27 126.3 89 65.2
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 1.6e-27 125.9 93 66.7
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 1.6e-27 125.9 85 70.6
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 2.0e-27 125.6 88 69.3
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 2.7e-27 125.2 89 65.2
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 4.5e-27 124.4 94 66.0
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.3e-26 122.9 85 65.9
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 2.2e-26 122.1 91 63.7
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 3.8e-26 121.3 85 64.7
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 6.5e-26 120.6 80 70.0
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 8.5e-26 120.2 90 64.4
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 8.5e-26 120.2 90 64.4
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 8.5e-26 120.2 91 63.7
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 1.1e-25 119.8 89 64.0
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.1e-25 119.8 89 64.0
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.1e-25 119.8 89 64.0
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 1.5e-25 119.4 80 67.5
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.9e-25 119.0 80 68.8
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 1.9e-25 119.0 91 62.6
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 2.5e-25 118.6 85 63.5
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 2.5e-25 118.6 80 67.5
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 4.2e-25 117.9 85 65.9
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 5.5e-25 117.5 80 65.0
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 5.5e-25 117.5 82 73.2
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 5.5e-25 117.5 89 64.0
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 5.5e-25 117.5 85 67.1
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 7.2e-25 117.1 89 61.8
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 9.4e-25 116.7 80 68.8
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 9.4e-25 116.7 90 64.4
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 1.2e-24 116.3 93 61.3
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 2.7e-24 115.2 69 79.7
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 3.6e-24 114.8 70 75.7
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 3.6e-24 114.8 81 67.9
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 3.6e-24 114.8 83 66.3
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 3.6e-24 114.8 84 66.7
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 6.1e-24 114.0 82 65.9
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 8.0e-24 113.6 79 65.8
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 8.0e-24 113.6 81 67.9
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 1.4e-23 112.8 91 63.7
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 1.4e-23 112.8 91 63.7
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 1.4e-23 112.8 91 63.7
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 1.8e-23 112.5 81 67.9
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 2.3e-23 112.1 78 65.4
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 2.3e-23 112.1 84 61.9
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 3.0e-23 111.7 85 61.2
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 5.2e-23 110.9 91 63.7
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 5.2e-23 110.9 86 61.6
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 8.8e-23 110.2 79 64.6
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 8.8e-23 110.2 89 60.7
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 1.2e-22 109.8 80 65.0
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 1.5e-22 109.4 86 60.5
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 2.0e-22 109.0 81 59.3
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 5.7e-22 107.5 84 58.3
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 5.7e-22 107.5 73 68.5
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 7.5e-22 107.1 92 56.5
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 2.2e-21 105.5 73 65.8
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 2.2e-21 105.5 65 76.9
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 4.8e-21 104.4 85 62.4
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 8.3e-21 103.6 83 61.4
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 1.1e-20 103.2 92 51.1
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 1.8e-20 102.4 80 60.0
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 3.1e-20 101.7 89 56.2
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 4.1e-20 101.3 72 65.3
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 5.4e-20 100.9 83 60.2
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 1.2e-19 99.8 83 59.0
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 1.2e-19 99.8 83 59.0
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 2.0e-19 99.0 74 64.9
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 7.7e-19 97.1 92 53.3
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 2.9e-18 95.1 92 50.0
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 6.5e-18 94.0 100 50.0
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 8.5e-18 93.6 75 60.0
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 1.8e-15 85.9 81 49.4
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 2.3e-15 85.5 91 39.6
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 1.2e-11 73.2 50 66.0
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 1.6e-11 72.8 49 67.3
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 1.7e-10 69.3 51 64.7
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 2.5e-09 65.5 47 61.7
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 1.2e-08 63.2 41 65.9
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.4e-07 59.7 69 44.9
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 6.8e-07 57.4 50 56.0


User provided reference genes

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