Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 1.4e-93 346.3 172 100.0
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 1.1e-87 326.6 173 96.0
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 3.4e-52 208.8 173 64.7
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 9.9e-52 207.2 172 64.5
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 1.3e-51 206.8 172 64.0
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 4.2e-50 201.8 176 60.8
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 5.4e-50 201.4 173 62.4
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 4.8e-46 188.3 161 62.7
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 4.8e-46 188.3 176 56.8
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 1.1e-45 187.2 156 61.5
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 1.3e-40 170.2 120 69.2
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 6.7e-40 167.9 124 67.7
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 4.3e-39 165.2 124 68.5
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 9.6e-39 164.1 157 55.4
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 2.1e-38 162.9 116 69.8
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 3.7e-38 162.2 123 66.7
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 6.2e-38 161.4 124 62.1
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 1.1e-37 160.6 130 63.8
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 1.8e-37 159.8 165 51.5
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 2.4e-37 159.5 127 64.6
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 2.4e-37 159.5 149 55.0
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 3.1e-37 159.1 165 51.5
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 6.9e-37 157.9 130 60.8
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 2.0e-36 156.4 138 57.2
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 2.6e-36 156.0 132 62.1
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 5.8e-36 154.8 161 51.6
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 1.0e-35 154.1 114 67.5
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 1.3e-35 153.7 168 50.6
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 1.7e-35 153.3 128 63.3
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 2.9e-35 152.5 163 49.7
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 2.9e-35 152.5 141 53.2
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 3.8e-35 152.1 169 50.3
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 1.1e-34 150.6 140 54.3
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 1.1e-34 150.6 114 66.7
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.5e-34 149.4 122 62.3
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.5e-34 149.4 169 50.3
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 4.2e-34 148.7 169 49.7
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 4.2e-34 148.7 149 58.4
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 1.2e-33 147.1 115 68.7
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 1.6e-33 146.7 118 60.2
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 2.1e-33 146.4 127 62.2
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 3.5e-33 145.6 123 59.3
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 7.9e-33 144.4 119 61.3
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 1.0e-32 144.1 102 67.6
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 1.3e-32 143.7 118 58.5
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 1.8e-32 143.3 116 63.8
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 3.0e-32 142.5 124 58.1
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 3.9e-32 142.1 158 43.0
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 5.1e-32 141.7 121 58.7
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 6.7e-32 141.4 96 69.8
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 1.1e-31 140.6 115 59.1
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 1.5e-31 140.2 124 58.9
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 1.9e-31 139.8 132 50.8
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 4.3e-31 138.7 121 57.9
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 4.3e-31 138.7 168 46.4
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 5.7e-31 138.3 121 57.9
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 7.4e-31 137.9 121 57.9
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 7.4e-31 137.9 121 57.9
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 9.7e-31 137.5 116 58.6
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 1.3e-30 137.1 102 63.7
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 1.6e-30 136.7 113 60.2
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 2.8e-30 136.0 111 62.2
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 2.8e-30 136.0 110 58.2
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 2.8e-30 136.0 119 54.6
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 3.7e-30 135.6 122 56.6
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 4.8e-30 135.2 121 57.0
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 4.8e-30 135.2 121 57.0
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 8.2e-30 134.4 157 47.1
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 8.2e-30 134.4 126 52.4
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 1.8e-29 133.3 123 56.1
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 2.4e-29 132.9 173 44.5
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 1.2e-28 130.6 136 51.5
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 3.4e-28 129.0 148 49.3
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 7.6e-28 127.9 138 44.2
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 6.5e-27 124.8 91 68.1
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 8.5e-27 124.4 87 66.7
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 1.1e-26 124.0 161 44.1
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 5.5e-26 121.7 96 62.5
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 1.6e-25 120.2 91 64.8
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 1.3e-24 117.1 91 61.5
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 9.7e-23 110.9 93 59.1
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 1.1e-21 107.5 79 65.8
Glyma.07G171100 Glycine max HOM05D007597 ORTHO05D009608 2.2e-19 99.8 110 49.1
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 4.2e-18 95.5 93 47.3
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 7.2e-18 94.7 101 53.5
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 5.1e-16 88.6 67 58.2
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 1.5e-15 87.0 87 49.4
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 2.8e-14 82.8 106 39.6
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 4.1e-13 79.0 79 53.2
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 5.3e-13 78.6 82 50.0
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 2.0e-12 76.6 89 44.9
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 1.3e-11 73.9 71 56.3
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 3.6e-09 65.9 45 71.1
FAN07G1480 Fragaria x ananassa HOM05D007597 ORTHO05D009608 4.7e-09 65.5 111 41.4
FAN07G2660 Fragaria x ananassa HOM05D007597 ORTHO05D009608 4.7e-09 65.5 111 41.4
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 3.9e-08 62.4 63 54.0


User provided reference genes

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