Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.80J6IZ Arachis hypogaea HOM05D032963 ORTHO05D026293 8.2e-110 400.6 232 100.0
arahy.Tifrunner.gnm1.ann1.LB4X9J Arachis hypogaea HOM05D000144 ORTHO05D000392 6.4e-38 161.8 99 84.8
arahy.Tifrunner.gnm1.ann1.QS45GW Arachis hypogaea HOM05D000144 ORTHO05D000392 6.4e-38 161.8 99 84.8
Lalb_Chr01g0019971 Lupinus albus HOM05D000144 ORTHO05D000392 9.7e-26 121.3 97 69.1
Psat3g061480 Pisum sativum HOM05D000144 ORTHO05D000392 3.7e-25 119.4 95 68.4
Glyma.19G160200 Glycine max HOM05D000144 ORTHO05D000392 4.8e-25 119.0 99 66.7
TPR.G19101 Trifolium pratense HOM05D000144 ORTHO05D000392 6.3e-25 118.6 89 74.2
Medtr7g095750 Medicago truncatula HOM05D000144 ORTHO05D000392 8.2e-25 118.2 93 67.7
Ca_08636_v3 Cicer arietinum L. HOM05D000144 ORTHO05D000392 8.5e-22 108.2 97 60.8
QL12p042419 Quercus lobata HOM05D000144 ORTHO05D000392 4.3e-18 95.9 105 58.1
Thecc.01G270200 Theobroma cacao HOM05D000144 ORTHO05D000392 4.8e-17 92.4 97 57.7
Sabra02G0038100 Salix brachista HOM05D000144 ORTHO05D000392 1.4e-16 90.9 102 54.9
Aqoxy2G03483 Aquilegia oxysepala HOM05D000144 ORTHO05D000392 4.1e-16 89.4 83 62.7
TAR549G0001 Trochodendron aralioides HOM05D000144 ORTHO05D000392 4.1e-16 89.4 81 61.7
arahy.Tifrunner.gnm1.ann1.J5A4V9 Arachis hypogaea HOM05D032963 ORTHO05D026293 4.5e-15 85.9 105 59.0
VMungo1383G3132 Vigna mungo HOM05D000144 ORTHO05D000392 4.5e-15 85.9 91 56.0
Haze_04634 Corylus avellana HOM05D000144 ORTHO05D000392 7.7e-15 85.1 105 52.4
TAR633G0875 Trochodendron aralioides HOM05D000144 ORTHO05D000392 1.7e-14 84.0 81 59.3
arahy.Tifrunner.gnm1.ann1.BCEW87 Arachis hypogaea HOM05D000389 ORTHO05D000287 3.8e-14 82.8 133 45.1
Cfa006208 Carpinus fangiana HOM05D000144 ORTHO05D000392 8.5e-14 81.6 106 50.0
PGR044G0235 Punica granatum HOM05D000144 ORTHO05D000392 8.5e-14 81.6 96 55.2
TAR362G0108 Trochodendron aralioides HOM05D000144 ORTHO05D000392 8.5e-14 81.6 87 55.2
ATR0665G228 Amborella trichopoda HOM05D000144 ORTHO05D000392 2.5e-13 80.1 98 55.1
arahy.Tifrunner.gnm1.ann1.A87HV7 Arachis hypogaea HOM05D032963 ORTHO05D026293 2.5e-13 80.1 122 50.8
Phvul.001G155500 Phaseolus vulgaris HOM05D000144 ORTHO05D000392 3.2e-13 79.7 91 53.8
Ciclev10019230m.g Citrus clementina HOM05D000144 ORTHO05D000392 9.4e-13 78.2 100 50.0
Glyma.03G157900 Glycine max HOM05D000144 ORTHO05D000392 9.4e-13 78.2 99 49.5
CANSAT25G3241 Cannabis sativa HOM05D000144 ORTHO05D000392 1.6e-12 77.4 84 58.3
Dinv32877 Davidia involucrata HOM05D000144 ORTHO05D045137 1.6e-12 77.4 93 51.6
MBI04_g10410_MAGBIO Magnolia biondii HOM05D000144 ORTHO05D000392 2.0e-10 70.5 67 65.7
arahy.Tifrunner.gnm1.ann1.102QYH Arachis hypogaea HOM05D000389 ORTHO05D000287 3.3e-10 69.7 108 53.7
Oeu002270.1 Olea europaea HOM05D000144 ORTHO05D000392 3.3e-10 69.7 103 51.5
arahy.Tifrunner.gnm1.ann1.1984FG Arachis hypogaea HOM05D000389 ORTHO05D000287 4.4e-10 69.3 116 52.6
CiPaw.07G086400 Carya illinoinensis HOM05D000144 ORTHO05D000392 9.7e-10 68.2 100 48.0
Nn3g19453 Nelumbo nucifera HOM05D000144 ORTHO05D000392 2.2e-09 67.0 102 47.1
Gohir.A08G187500 Gossypium hirsutum HOM05D000144 ORTHO05D000392 6.3e-09 65.5 97 44.3
CSS0005152 Camellia sinensis var. sinensis HOM05D000144 ORTHO05D000392 3.1e-08 63.2 118 41.5
Duzib133G1234 Durio zibethinus HOM05D000144 ORTHO05D000392 7.0e-08 62.0 108 42.6
COL.COLO4_09177 Corchorus olitorius HOM05D000144 ORTHO05D000392 9.1e-08 61.6 106 44.3
Actinidia24927 Actinidia chinensis HOM05D000144 ORTHO05D026293 2.6e-07 60.1 83 50.6
Potri.005G215800 Populus trichocarpa HOM05D000144 ORTHO05D000392 2.6e-07 60.1 104 41.3
EL10Ac5g10485 Beta vulgaris HOM05D000144 ORTHO05D000392 3.4e-07 59.7 97 46.4
Dinv11619 Davidia involucrata HOM05D000144 ORTHO05D000392 1.0e-06 58.2 104 41.3
Potri.002G047200 Populus trichocarpa HOM05D000144 ORTHO05D000392 1.0e-06 58.2 106 43.4
Manes.01G203400 Manihot esculenta HOM05D000144 ORTHO05D000392 1.3e-06 57.8 80 47.5
TWI75G1735 Tripterygium wilfordii HOM05D000144 ORTHO05D000392 1.3e-06 57.8 86 50.0
Prupe.8G233900 Prunus persica HOM05D000144 ORTHO05D000392 1.7e-06 57.4 82 47.6


User provided reference genes

Program Settings