Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7Y045D Arachis hypogaea HOM05D001607 ORTHO05D001893 9.6e-161 570.1 282 100.0
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 3.7e-120 435.3 261 84.7
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 8.2e-120 434.1 261 84.3
arahy.Tifrunner.gnm1.ann1.I8PQ41 Arachis hypogaea HOM05D001607 ORTHO05D001893 3.0e-114 415.6 222 91.9
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 1.3e-109 400.2 248 77.4
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 8.5e-109 397.5 248 77.4
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 4.2e-108 395.2 248 76.2
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 5.1e-106 388.3 248 75.0
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 7.4e-105 384.4 248 75.4
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 3.7e-104 382.1 248 73.4
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 1.1e-100 370.5 247 71.3
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 1.5e-100 370.2 249 72.7
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 4.2e-100 368.6 248 70.6
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 2.1e-99 366.3 248 70.2
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 8.0e-99 364.4 248 69.0
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 3.0e-98 362.5 247 70.9
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 4.0e-98 362.1 248 69.0
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 2.8e-96 355.9 247 68.8
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 4.8e-96 355.1 247 68.0
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 4.8e-96 355.1 247 67.2
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 6.3e-96 354.8 247 67.2
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 6.3e-96 354.8 247 67.2
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 2.4e-95 352.8 273 64.1
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 3.1e-95 352.4 247 66.8
CiPaw.03G107800 Carya illinoinensis HOM05D001607 ORTHO05D001893 4.1e-95 352.1 247 68.0
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 5.3e-95 351.7 247 67.6
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 5.3e-95 351.7 247 66.8
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 7.0e-95 351.3 246 67.1
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 9.1e-95 350.9 247 66.0
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 9.1e-95 350.9 248 69.8
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 1.2e-94 350.5 273 65.2
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 1.6e-94 350.1 247 66.4
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.6e-94 349.4 247 66.4
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.6e-94 349.4 247 66.4
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 3.5e-94 349.0 247 67.6
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 4.5e-94 348.6 247 66.0
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 4.5e-94 348.6 247 67.2
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 4.5e-94 348.6 247 66.4
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 5.9e-94 348.2 247 67.2
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 7.7e-94 347.8 247 65.2
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.7e-93 346.7 247 66.8
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.9e-93 345.9 262 63.4
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 3.8e-93 345.5 251 63.3
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 5.0e-93 345.1 248 65.7
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 5.0e-93 345.1 247 66.0
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 6.5e-93 344.7 247 66.0
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 1.5e-92 343.6 262 63.0
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 1.9e-92 343.2 246 63.8
Eucgr.A02780 Eucalyptus grandis HOM05D001607 ORTHO05D001893 2.5e-92 342.8 247 64.0
Psat0s3405g0040 Pisum sativum HOM05D001607 ORTHO05D001893 3.2e-92 342.4 252 66.7
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 4.2e-92 342.0 247 65.2
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 9.4e-92 340.9 253 65.2
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 1.2e-91 340.5 272 60.7
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 1.6e-91 340.1 272 60.7
Cpa.g.sc107.64 Carica papaya HOM05D001607 ORTHO05D001893 2.7e-91 339.3 246 64.2
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 2.7e-91 339.3 272 60.3
Gorai.004G118300 Gossypium raimondii HOM05D001607 ORTHO05D001893 2.7e-91 339.3 247 64.4
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 2.7e-91 339.3 248 65.3
Dinv28425 Davidia involucrata HOM05D001607 ORTHO05D001893 8.0e-91 337.8 246 66.3
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 1.0e-90 337.4 248 64.5
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 1.0e-90 337.4 248 64.5
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 4.0e-90 335.5 272 59.9
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 5.2e-90 335.1 247 63.6
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 3.4e-89 332.4 246 63.8
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 7.5e-89 331.3 272 59.6
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 9.8e-89 330.9 247 63.6
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 2.2e-88 329.7 246 62.6
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 2.8e-88 329.3 246 65.0
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 6.3e-88 328.2 247 64.4
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 6.3e-88 328.2 246 62.6
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 8.3e-88 327.8 246 64.2
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 8.3e-88 327.8 246 64.2
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 1.8e-87 326.6 246 62.6
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 3.1e-87 325.9 246 63.4
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 3.1e-87 325.9 246 61.8
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 7.0e-87 324.7 246 61.4
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 7.0e-87 324.7 290 57.2
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 1.6e-86 323.6 246 61.4
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 1.6e-86 323.6 246 62.2
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 2.7e-86 322.8 258 57.8
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 2.7e-86 322.8 246 61.0
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 2.7e-86 322.8 246 61.0
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 2.7e-86 322.8 246 61.0
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 2.7e-86 322.8 246 61.4
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 3.5e-86 322.4 246 61.4
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 3.5e-86 322.4 246 59.3
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 4.5e-86 322.0 246 64.6
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 4.5e-86 322.0 246 61.0
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 1.3e-85 320.5 246 62.6
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 1.3e-85 320.5 246 62.2
arahy.Tifrunner.gnm1.ann1.L95KH7 Arachis hypogaea HOM05D001607 ORTHO05D001893 1.7e-85 320.1 156 98.1
Sopen03g004440 Solanum pennellii HOM05D001607 ORTHO05D001893 1.7e-85 320.1 256 60.5
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 2.2e-85 319.7 256 60.2
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 3.8e-85 318.9 247 61.1
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 5.0e-85 318.5 265 56.6
A01p12270 Brassica napus HOM05D001607 ORTHO05D001893 5.0e-85 318.5 247 59.9
BraA01t01171Z Brassica rapa HOM05D001607 ORTHO05D001893 5.0e-85 318.5 247 59.9
BcaC09g51300 Brassica carinata HOM05D001607 ORTHO05D001893 6.5e-85 318.2 247 59.9
BcaNung04147 Brassica carinata HOM05D001607 ORTHO05D001893 6.5e-85 318.2 247 59.5
C01p14680 Brassica napus HOM05D001607 ORTHO05D001893 6.5e-85 318.2 247 59.9
BolC1t01419H Brassica oleracea HOM05D001607 ORTHO05D001893 6.5e-85 318.2 247 59.9
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 1.9e-84 316.6 246 58.9
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 2.5e-84 316.2 246 58.1
BraA03t14327Z Brassica rapa HOM05D001607 ORTHO05D001893 4.2e-84 315.5 246 59.3
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 5.5e-84 315.1 247 59.1
vmacro06666 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 9.4e-84 314.3 246 60.6
Lsat_1_v5_gn_8_8420 Lactuca sativa HOM05D001607 ORTHO05D001893 3.6e-83 312.4 245 61.2
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 8.0e-83 311.2 254 60.2
ECA233G5223 Erigeron canadensis HOM05D001607 ORTHO05D001893 4.0e-82 308.9 245 59.2
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 5.2e-82 308.5 246 58.9
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 5.2e-82 308.5 244 56.1
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 5.2e-82 308.5 246 60.6
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 8.8e-82 307.8 247 59.1
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 1.5e-81 307.0 246 56.9
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 5.7e-81 305.1 284 55.3
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 7.5e-81 304.7 246 57.3
Nitab4.5_0001842g0120 Nicotiana tabacum HOM05D001607 ORTHO05D001893 1.3e-80 303.9 222 63.1
THA.LOC104824860 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 3.7e-80 302.4 255 56.5
HanXRQChr10g0304171 Helianthus annuus HOM05D001607 ORTHO05D001893 4.9e-80 302.0 253 58.5
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 1.8e-79 300.1 247 55.1
THA.LOC104824854 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 2.4e-79 299.7 247 54.7
HPP92_011359 Vanilla planifolia HOM05D001607 ORTHO05D001893 3.1e-79 299.3 248 54.4
Nitab4.5_0005845g0050 Nicotiana tabacum HOM05D001607 ORTHO05D001893 1.2e-78 297.4 206 65.5
SGA_v2.0_scaffold60G21061 Striga asiatica HOM05D001607 ORTHO05D001893 7.2e-76 288.1 247 53.4
unitig_46.g18794 Utricularia gibba HOM05D001607 ORTHO05D001893 2.8e-75 286.2 245 54.3
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 2.0e-73 280.0 247 58.3
SMO367G0172 Selaginella moellendorffii HOM05D001607 ORTHO05D001893 2.4e-71 273.1 249 53.4
SEGI_13029 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 3.5e-70 269.2 215 54.9
AagrBONN_evm.TU.Sc2ySwM_344.3434 Anthoceros agrestis HOM05D001607 ORTHO05D001893 1.9e-68 263.5 243 51.4
Ca_05504_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 1.0e-66 257.7 156 73.1
Ca_05507_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 1.0e-66 257.7 156 73.1
Gohir.D08G110716 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.4e-66 257.3 189 63.5
Pp3c7_23000 Physcomitrium patens HOM05D001607 ORTHO05D001893 1.1e-63 247.7 243 47.3
Pp3c2_32420 Physcomitrium patens HOM05D001607 ORTHO05D001893 9.5e-60 234.6 243 45.7
Mapoly0069s0029 Marchantia polymorpha HOM05D001607 ORTHO05D001893 1.1e-58 231.1 243 44.4
CAN.G307.24 Capsicum annuum HOM05D001607 ORTHO05D001893 9.5e-52 208.0 314 41.4
CDE08G0131 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 3.2e-39 166.4 149 55.0
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 2.3e-37 160.2 129 53.5
Peaxi162Scf00444g00717 Petunia axillaris HOM05D001607 ORTHO05D001893 1.3e-32 144.4 96 66.7
CSS0024839 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 1.9e-31 140.6 88 72.7
THA.LOC104818559 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 3.2e-31 139.8 96 62.5
CSS0019814 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 1.3e-29 134.4 124 53.2
Rhsim05G0128400 Rhododendron simsii HOM05D001607 ORTHO05D001893 6.2e-27 125.6 91 64.8
Nitab4.5_0003131g0040 Nicotiana tabacum HOM05D001607 ORTHO05D001893 1.2e-25 121.3 93 61.3
Cre16.g675350 Chlamydomonas reinhardtii HOM05D001607 ORTHO05D001893 4.9e-24 115.9 286 31.1
PRCOL_00005219 Prasinoderma coloniale HOM05D001607 ORTHO05D001893 7.4e-20 102.1 220 34.1
Glyma.09G137500 Glycine max HOM05D001607 ORTHO05D001893 2.9e-08 63.5 44 68.2


User provided reference genes

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