Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7XF55S Arachis hypogaea HOM05D000766 ORTHO05D086076 1.3e-53 213.0 128 100.0
arahy.Tifrunner.gnm1.ann1.EAD2WZ Arachis hypogaea HOM05D000766 ORTHO05D000587 1.0e-13 80.5 42 90.5
arahy.Tifrunner.gnm1.ann1.QRJR8U Arachis hypogaea HOM05D000766 ORTHO05D000587 1.0e-13 80.5 42 90.5
arahy.Tifrunner.gnm1.ann1.L50RKA Arachis hypogaea HOM05D008607 ORTHO05D010784 1.4e-13 80.1 113 46.0
arahy.Tifrunner.gnm1.ann1.2L6ZX4 Arachis hypogaea HOM05D000766 ORTHO05D000587 3.1e-10 68.9 42 78.6
QL08p014742 Quercus lobata HOM05D000766 ORTHO05D000587 4.2e-07 58.5 42 66.7
MBI02_g37287_MAGBIO Magnolia biondii HOM05D000766 ORTHO05D000587 5.5e-07 58.2 42 71.4
PSO541G3217 Papaver somniferum HOM05D000766 ORTHO05D000587 5.5e-07 58.2 42 71.4
PSO675G8386 Papaver somniferum HOM05D000766 ORTHO05D000587 5.5e-07 58.2 42 71.4
SalBow8G3494 Salvia bowleyana HOM05D000766 ORTHO05D000587 7.2e-07 57.8 42 66.7
ATR0804G008 Amborella trichopoda HOM05D000766 ORTHO05D000587 9.4e-07 57.4 42 69.0
MBI18_g44479_MAGBIO Magnolia biondii HOM05D000766 ORTHO05D000587 9.4e-07 57.4 47 66.0
Phvul.005G088900 Phaseolus vulgaris HOM05D000766 ORTHO05D000587 9.4e-07 57.4 42 66.7
Rhsim02G0116900 Rhododendron simsii HOM05D000766 ORTHO05D000587 9.4e-07 57.4 42 69.0
Ca_00217_v3 Cicer arietinum L. HOM05D000766 ORTHO05D000587 1.2e-06 57.0 42 66.7
Lj1A1218T63 Lonicera japonica HOM05D000766 ORTHO05D000587 1.6e-06 56.6 42 69.0
PGR004G1549 Punica granatum HOM05D000766 ORTHO05D000587 1.6e-06 56.6 42 66.7
Cpa.g.sc12.2 Carica papaya HOM05D000766 ORTHO05D000587 2.1e-06 56.2 42 69.0
CiPaw.12G124200 Carya illinoinensis HOM05D000766 ORTHO05D000587 2.1e-06 56.2 42 69.0
Ca_01786_v3 Cicer arietinum L. HOM05D000766 ORTHO05D000587 2.1e-06 56.2 42 64.3
Duzib235G0055 Durio zibethinus HOM05D000766 ORTHO05D000587 2.1e-06 56.2 42 64.3
Gohir.A10G017900 Gossypium hirsutum HOM05D000766 ORTHO05D000587 2.1e-06 56.2 42 64.3
Gohir.D10G018200 Gossypium hirsutum HOM05D000766 ORTHO05D000587 2.1e-06 56.2 42 64.3
Gorai.011G020200 Gossypium raimondii HOM05D000766 ORTHO05D000587 2.1e-06 56.2 42 64.3
Prupe.4G196500 Prunus persica HOM05D000766 ORTHO05D000587 2.1e-06 56.2 42 66.7
THA.LOC104813400 Tarenaya hassleriana HOM05D000766 ORTHO05D000587 2.1e-06 56.2 42 69.0
TAR626G0814 Trochodendron aralioides HOM05D000766 ORTHO05D000587 2.1e-06 56.2 42 69.0
AagrBONN_evm.TU.Sc2ySwM_228.5607 Anthoceros agrestis HOM05D000766 ORTHO05D000587 2.7e-06 55.8 44 63.6
arahy.Tifrunner.gnm1.ann1.FVVA4B Arachis hypogaea HOM05D000766 ORTHO05D000587 2.7e-06 55.8 42 64.3
arahy.Tifrunner.gnm1.ann1.KU3YBZ Arachis hypogaea HOM05D000766 ORTHO05D000587 2.7e-06 55.8 42 64.3
DCAR_004165 Daucus carota HOM05D000766 ORTHO05D000587 2.7e-06 55.8 42 66.7
Dinv17863 Davidia involucrata HOM05D000766 ORTHO05D000587 2.7e-06 55.8 42 66.7
MBI18_g47555_MAGBIO Magnolia biondii HOM05D000766 ORTHO05D000587 2.7e-06 55.8 47 63.8
vmacro15848 Vaccinium macrocarpon HOM05D000766 ORTHO05D000587 2.7e-06 55.8 41 68.3
Atru.chr10.2095 Acer truncatum HOM05D000766 ORTHO05D000587 3.6e-06 55.5 42 66.7
EL10Ac4g08032 Beta vulgaris HOM05D000766 ORTHO05D000587 3.6e-06 55.5 42 66.7
CDE02G3468 Ceratophyllum demersum HOM05D000766 ORTHO05D000587 3.6e-06 55.5 42 64.3
FAN25G2310 Fragaria x ananassa HOM05D000766 ORTHO05D000587 3.6e-06 55.5 42 64.3
Glyma.12G161400 Glycine max HOM05D000766 ORTHO05D000587 3.6e-06 55.5 42 64.3
Lalb_Chr05g0218041 Lupinus albus HOM05D000766 ORTHO05D000587 3.6e-06 55.5 42 64.3
MD03G1216500 Malus domestica HOM05D000766 ORTHO05D000587 3.6e-06 55.5 42 66.7
Medtr4g091900 Medicago truncatula HOM05D000766 ORTHO05D000587 3.6e-06 55.5 42 66.7
Nitab4.5_0004384g0040 Nicotiana tabacum HOM05D000766 ORTHO05D000587 3.6e-06 55.5 42 64.3
Phvul.011G152500 Phaseolus vulgaris HOM05D000766 ORTHO05D000587 3.6e-06 55.5 42 64.3
Potri.011G033100 Populus trichocarpa HOM05D000766 ORTHO05D000587 3.6e-06 55.5 42 64.3
RcHm_v2.0_Chr5g0004841 Rosa chinensis HOM05D000766 ORTHO05D000587 3.6e-06 55.5 42 64.3
SMO146G0065 Selaginella moellendorffii HOM05D000766 ORTHO05D000587 3.6e-06 55.5 42 64.3
SEGI_33307 Sequoiadendron giganteum HOM05D000766 ORTHO05D000587 3.6e-06 55.5 38 71.1
TPR.G33113 Trifolium pratense HOM05D000766 ORTHO05D000587 3.6e-06 55.5 40 67.5
TAR624G0220 Trochodendron aralioides HOM05D000766 ORTHO05D000587 3.6e-06 55.5 42 69.0
Actinidia09939 Actinidia chinensis HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 66.7
MELO3C016623.2 Cucumis melo HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 64.3
CsaV3_3G005530 Cucumis sativus L. HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 64.3
FvH4_3g03210 Fragaria vesca HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 64.3
FAN21G1399 Fragaria x ananassa HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 61.9
Glyma.12G216900 Glycine max HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 61.9
Glyma.13G284200 Glycine max HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 61.9
Manes.15G080600 Manihot esculenta HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 66.7
Nn1g06888 Nelumbo nucifera HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 69.0
Oeu052322.1 Olea europaea HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 64.3
SalBow1G3752 Salvia bowleyana HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 61.9
SalBow7G1835 Salvia bowleyana HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 64.3
TPR.G13918 Trifolium pratense HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 64.3
VMungo1080G1386 Vigna mungo HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 64.3
GSVIVG01005278001 Vitis vinifera HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 61.9
GSVIVG01005303001 Vitis vinifera HOM05D000766 ORTHO05D000587 4.7e-06 55.1 42 61.9
Actinidia24047 Actinidia chinensis HOM05D000766 ORTHO05D000587 6.1e-06 54.7 42 64.3
arahy.Tifrunner.gnm1.ann1.03JN9Y Arachis hypogaea HOM05D000766 ORTHO05D000587 6.1e-06 54.7 30 86.7
EL10Ac8g19953 Beta vulgaris HOM05D000766 ORTHO05D000587 6.1e-06 54.7 42 64.3
CiPaw.11G179800 Carya illinoinensis HOM05D000766 ORTHO05D000587 6.1e-06 54.7 42 64.3
AUR62012537 Chenopodium quinoa HOM05D000766 ORTHO05D000587 6.1e-06 54.7 42 64.3
AUR62014657 Chenopodium quinoa HOM05D000766 ORTHO05D000587 6.1e-06 54.7 42 64.3
Ca_18465_v3 Cicer arietinum L. HOM05D000766 ORTHO05D000587 6.1e-06 54.7 42 64.3
Ca_29637_v3 Cicer arietinum L. HOM05D000766 ORTHO05D000587 6.1e-06 54.7 42 64.3
Cc05_g12910 Coffea canephora HOM05D000766 ORTHO05D000587 6.1e-06 54.7 40 65.0
Glyma.12G141900 Glycine max HOM05D000766 ORTHO05D000587 6.1e-06 54.7 42 61.9
Lj3g0012491 Lotus japonicus HOM05D000766 ORTHO05D000587 6.1e-06 54.7 42 64.3
Mapoly0055s0047 Marchantia polymorpha HOM05D000766 ORTHO05D000587 6.1e-06 54.7 42 66.7
Nn1g03781 Nelumbo nucifera HOM05D000766 ORTHO05D000587 6.1e-06 54.7 42 66.7
Sabra11G0022600 Salix brachista HOM05D000766 ORTHO05D000587 6.1e-06 54.7 42 64.3
Sabra11G0026200 Salix brachista HOM05D000766 ORTHO05D000587 6.1e-06 54.7 42 64.3
Aqoxy1G03961 Aquilegia oxysepala HOM05D000766 ORTHO05D000587 8.0e-06 54.3 42 64.3
CSS0027363 Camellia sinensis var. sinensis HOM05D000766 ORTHO05D000587 8.0e-06 54.3 41 65.9
CARHR234910 Cardamine hirsuta HOM05D000766 ORTHO05D000587 8.0e-06 54.3 41 65.9
Cfa020476 Carpinus fangiana HOM05D000766 ORTHO05D000587 8.0e-06 54.3 42 64.3
CDE05G0475 Ceratophyllum demersum HOM05D000766 ORTHO05D000587 8.0e-06 54.3 41 65.9
Ciclev10009497m.g Citrus clementina HOM05D000766 ORTHO05D000587 8.0e-06 54.3 42 64.3
Haze_09566 Corylus avellana HOM05D000766 ORTHO05D000587 8.0e-06 54.3 42 64.3
FAN21G0682 Fragaria x ananassa HOM05D000766 ORTHO05D000587 8.0e-06 54.3 40 67.5
MD05G1334200 Malus domestica HOM05D000766 ORTHO05D000587 8.0e-06 54.3 42 59.5
Manes.03G119600 Manihot esculenta HOM05D000766 ORTHO05D000587 8.0e-06 54.3 42 64.3
Rhsim02G0117400 Rhododendron simsii HOM05D000766 ORTHO05D000587 8.0e-06 54.3 42 64.3
THA.LOC104799896 Tarenaya hassleriana HOM05D000766 ORTHO05D000587 8.0e-06 54.3 42 64.3


User provided reference genes

Program Settings