Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7U608I Arachis hypogaea HOM05D002187 ORTHO05D026886 3.8e-51 204.5 102 100.0
arahy.Tifrunner.gnm1.ann1.E3GXPA Arachis hypogaea HOM05D000857 ORTHO05D026886 1.0e-16 90.1 51 84.3
arahy.Tifrunner.gnm1.ann1.NADZ26 Arachis hypogaea HOM05D000813 ORTHO05D000995 1.4e-16 89.7 49 85.7
arahy.Tifrunner.gnm1.ann1.MVX6LJ Arachis hypogaea HOM05D002187 ORTHO05D002243 3.9e-11 71.6 40 85.0
arahy.Tifrunner.gnm1.ann1.Z7V5PV Arachis hypogaea HOM05D002187 ORTHO05D002243 1.5e-10 69.7 40 82.5
arahy.Tifrunner.gnm1.ann1.V3BTAU Arachis hypogaea HOM05D007504 ORTHO05D007629 5.6e-10 67.8 37 83.8
Glyma.04G058600 Glycine max HOM05D002187 ORTHO05D002243 1.2e-09 66.6 40 80.0
Medtr3g105660 Medicago truncatula HOM05D002187 ORTHO05D002243 2.1e-09 65.9 40 77.5
TPR.G6775 Trifolium pratense HOM05D002187 ORTHO05D002243 2.1e-09 65.9 40 77.5
Lj1g0003178 Lotus japonicus HOM05D002187 ORTHO05D002243 2.8e-09 65.5 40 77.5
Phvul.009G085100 Phaseolus vulgaris HOM05D002187 ORTHO05D002243 3.6e-09 65.1 40 77.5
Ca_15795_v3 Cicer arietinum L. HOM05D002187 ORTHO05D002243 6.2e-09 64.3 40 75.0
arahy.Tifrunner.gnm1.ann1.EG8HYN Arachis hypogaea HOM05D002187 ORTHO05D002243 1.4e-08 63.2 40 80.0
Atru.chr7.2605 Acer truncatum HOM05D002187 ORTHO05D002243 2.3e-08 62.4 40 70.0
VMungo1309G0795 Vigna mungo HOM05D002187 ORTHO05D002243 2.3e-08 62.4 40 72.5
Psat0s4637g0040 Pisum sativum HOM05D002187 ORTHO05D002243 3.1e-08 62.0 40 70.0
Lalb_Chr08g0244581 Lupinus albus HOM05D002187 ORTHO05D002243 4.0e-08 61.6 38 73.7
Nn4g23625 Nelumbo nucifera HOM05D002187 ORTHO05D002243 5.2e-08 61.2 40 65.0
Thecc.09G010800 Theobroma cacao HOM05D002187 ORTHO05D002243 5.2e-08 61.2 40 70.0
ClCG08G013880 Citrullus lanatus HOM05D002187 ORTHO05D002243 6.8e-08 60.8 40 70.0
CsaV3_2G032660 Cucumis sativus L. HOM05D002187 ORTHO05D002243 6.8e-08 60.8 40 70.0
Lalb_Chr11g0063441 Lupinus albus HOM05D002187 ORTHO05D002243 6.8e-08 60.8 40 67.5
Ciclev10009111m.g Citrus clementina HOM05D002187 ORTHO05D002243 1.5e-07 59.7 40 70.0
TWI63G1524 Tripterygium wilfordii HOM05D002187 ORTHO05D002243 2.0e-07 59.3 40 70.0
MELO3C011320.2 Cucumis melo HOM05D002187 ORTHO05D002243 2.6e-07 58.9 40 67.5
Sed0019494 Sechium edule HOM05D002187 ORTHO05D002243 2.6e-07 58.9 40 67.5
COL.COLO4_19002 Corchorus olitorius HOM05D002187 ORTHO05D002243 3.4e-07 58.5 40 65.0
Manes.02G064300 Manihot esculenta HOM05D002187 ORTHO05D002243 3.4e-07 58.5 40 62.5
Prupe.1G399300 Prunus persica HOM05D002187 ORTHO05D002243 3.4e-07 58.5 40 65.0
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 3.4e-07 58.5 40 62.5
Gohir.A05G062800 Gossypium hirsutum HOM05D002187 ORTHO05D002243 4.4e-07 58.2 40 67.5
Gohir.A05G062866 Gossypium hirsutum HOM05D002187 ORTHO05D002243 4.4e-07 58.2 40 67.5
Gohir.D05G065300 Gossypium hirsutum HOM05D002187 ORTHO05D002243 4.4e-07 58.2 40 67.5
Duzib150G1169 Durio zibethinus HOM05D002187 ORTHO05D002243 5.8e-07 57.8 40 67.5
Duzib187G1650 Durio zibethinus HOM05D002187 ORTHO05D002243 5.8e-07 57.8 40 67.5
Manes.16G133500 Manihot esculenta HOM05D002187 ORTHO05D002243 5.8e-07 57.8 40 67.5
Sed0019319 Sechium edule HOM05D002187 ORTHO05D002243 7.5e-07 57.4 40 65.0
Cpa.g.sc23.48 Carica papaya HOM05D002187 ORTHO05D002243 9.8e-07 57.0 40 65.0
Dinv34872 Davidia involucrata HOM05D002187 ORTHO05D002243 9.8e-07 57.0 40 62.5
Hma1.2p1_0588F.1_g184435 Hydrangea macrophylla HOM05D002187 ORTHO05D002243 9.8e-07 57.0 40 62.5
MD15G1045600 Malus domestica HOM05D002187 ORTHO05D002243 9.8e-07 57.0 40 62.5
TAR622G0938 Trochodendron aralioides HOM05D002187 ORTHO05D002243 9.8e-07 57.0 35 68.6
Haze_14087 Corylus avellana HOM05D002187 ORTHO05D002243 1.3e-06 56.6 40 60.0
CSS0031826 Camellia sinensis var. sinensis HOM05D002187 ORTHO05D002243 1.7e-06 56.2 40 62.5
Sabra18G0017300 Salix brachista HOM05D002187 ORTHO05D002243 2.2e-06 55.8 75 42.7
Glyma.06G059402 Glycine max HOM05D002187 ORTHO05D002243 2.9e-06 55.5 38 68.4
Gorai.009G066100 Gossypium raimondii HOM05D002187 ORTHO05D002243 3.7e-06 55.1 40 65.0
RcHm_v2.0_Chr6g0299041 Rosa chinensis HOM05D002187 ORTHO05D002243 3.7e-06 55.1 40 62.5
BcaB05g21501 Brassica carinata HOM05D002187 ORTHO05D002243 4.9e-06 54.7 40 60.0
Cfa007987 Carpinus fangiana HOM05D002187 ORTHO05D002243 4.9e-06 54.7 40 57.5
ECA240G0785 Erigeron canadensis HOM05D002187 ORTHO05D002243 6.4e-06 54.3 40 60.0
FvH4_2g41440 Fragaria vesca HOM05D002187 ORTHO05D002243 8.3e-06 53.9 40 60.0
Solyc08g006510.3 Solanum lycopersicum HOM05D002187 ORTHO05D002243 8.3e-06 53.9 40 60.0
Sopen08g002470 Solanum pennellii HOM05D002187 ORTHO05D002243 8.3e-06 53.9 40 60.0


User provided reference genes

Program Settings