Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7TI70S Arachis hypogaea HOM05D006278 ORTHO05D007526 3.4e-161 572.0 384 100.0
arahy.Tifrunner.gnm1.ann1.K7D9EI Arachis hypogaea HOM05D006278 ORTHO05D007526 2.2e-144 516.2 396 91.7
Lalb_Chr24g0398921 Lupinus albus HOM05D006278 ORTHO05D007526 5.1e-48 196.1 273 47.6
Glyma.04G031100 Glycine max HOM05D006278 ORTHO05D007526 5.3e-45 186.0 395 38.7
Lj5g0016594 Lotus japonicus HOM05D006278 ORTHO05D007526 3.4e-44 183.3 309 41.7
TPR.G12310 Trifolium pratense HOM05D006278 ORTHO05D007526 1.2e-41 174.9 276 44.2
Glyma.06G031201 Glycine max HOM05D006278 ORTHO05D007526 1.0e-40 171.8 386 37.3
VMungo1309G1357 Vigna mungo HOM05D006278 ORTHO05D007526 1.0e-40 171.8 405 36.3
Medtr3g111950 Medicago truncatula HOM05D006278 ORTHO05D007526 8.7e-40 168.7 276 42.8
COL.COLO4_26292 Corchorus olitorius HOM05D006278 ORTHO05D007526 2.5e-39 167.2 272 43.0
Phvul.009G058700 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 1.3e-38 164.9 410 35.4
Psat5g012120 Pisum sativum HOM05D006278 ORTHO05D007526 2.1e-38 164.1 213 46.9
Ca_15506_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 4.8e-38 162.9 275 44.4
TWI12G1431 Tripterygium wilfordii HOM05D006278 ORTHO05D007526 4.8e-38 162.9 280 41.8
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 1.8e-37 161.0 282 42.2
Thecc.08G029100 Theobroma cacao HOM05D006278 ORTHO05D007526 5.9e-36 156.0 277 40.1
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 2.2e-35 154.1 282 42.2
CiPaw.04G062900 Carya illinoinensis HOM05D006278 ORTHO05D007526 2.9e-35 153.7 276 38.0
Manes.05G158000 Manihot esculenta HOM05D006278 ORTHO05D007526 1.1e-34 151.8 292 36.0
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 1.9e-34 151.0 284 39.1
Potri.002G034700 Populus trichocarpa HOM05D006278 ORTHO05D007526 2.5e-34 150.6 277 40.8
Atru.chr13.448 Acer truncatum HOM05D006278 ORTHO05D007526 3.2e-34 150.2 284 38.7
Dinv36098 Davidia involucrata HOM05D006278 ORTHO05D007526 3.2e-34 150.2 321 36.1
Duzib041G0028 Durio zibethinus HOM05D006278 ORTHO05D007526 9.3e-34 148.7 272 38.6
Gohir.D06G004900 Gossypium hirsutum HOM05D006278 ORTHO05D007526 6.1e-33 146.0 279 38.0
Gorai.010G009500 Gossypium raimondii HOM05D006278 ORTHO05D007526 6.1e-33 146.0 279 38.0
VMungo0647G1119 Vigna mungo HOM05D006278 ORTHO05D007526 6.1e-33 146.0 286 43.4
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 1.3e-32 144.8 278 41.7
Gohir.A06G009400 Gossypium hirsutum HOM05D006278 ORTHO05D007526 3.9e-32 143.3 279 37.3
Lj1g0002957 Lotus japonicus HOM05D006278 ORTHO05D007526 8.7e-32 142.1 305 39.3
Psat6g008120 Pisum sativum HOM05D006278 ORTHO05D007526 8.7e-32 142.1 281 37.7
PGR004G0534 Punica granatum HOM05D006278 ORTHO05D007526 1.5e-31 141.4 284 36.6
Haze_13828 Corylus avellana HOM05D006278 ORTHO05D007526 1.9e-31 141.0 220 39.1
Lj4P787T11 Lonicera japonica HOM05D006278 ORTHO05D007526 2.2e-30 137.5 229 37.6
CANSAT35G1968 Cannabis sativa HOM05D006278 ORTHO05D007526 3.7e-30 136.7 273 37.0
TPR.G20186 Trifolium pratense HOM05D006278 ORTHO05D007526 3.7e-30 136.7 299 35.8
CSS0025999 Camellia sinensis var. sinensis HOM05D006278 ORTHO05D007526 4.8e-30 136.3 185 42.2
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 1.1e-29 135.2 272 39.0
Cpa.g.sc3.303 Carica papaya HOM05D006278 ORTHO05D007526 1.2e-28 131.7 243 37.4
QL12p039628 Quercus lobata HOM05D006278 ORTHO05D007526 4.5e-28 129.8 285 35.8
Rhsim06G0031900 Rhododendron simsii HOM05D006278 ORTHO05D007526 7.7e-28 129.0 289 33.9
TAR101G0003 Trochodendron aralioides HOM05D006278 ORTHO05D007526 7.7e-28 129.0 217 38.2
Cfa008229 Carpinus fangiana HOM05D006278 ORTHO05D007526 2.9e-27 127.1 280 35.4
Migut.O00967 Erythranthe guttata HOM05D006278 ORTHO05D007526 2.9e-27 127.1 221 38.5
PSO675G3973 Papaver somniferum HOM05D006278 ORTHO05D007526 2.9e-27 127.1 262 35.1
PSO541G0933 Papaver somniferum HOM05D006278 ORTHO05D007526 8.5e-27 125.6 223 37.2
MD08G1030100 Malus domestica HOM05D006278 ORTHO05D007526 2.5e-26 124.0 296 33.8
Aqoxy6G01136 Aquilegia oxysepala HOM05D006278 ORTHO05D007526 4.2e-26 123.2 266 34.2
MSTRG.1269 Avicennia marina HOM05D006278 ORTHO05D007526 4.2e-26 123.2 227 35.2
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 7.2e-26 122.5 211 38.4
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 9.4e-26 122.1 276 34.4
Duzib093G1165 Durio zibethinus HOM05D006278 ORTHO05D007526 9.4e-26 122.1 290 34.8
Ca_13364_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 1.2e-25 121.7 241 44.0
Medtr1g022365 Medicago truncatula HOM05D006278 ORTHO05D007526 1.2e-25 121.7 242 37.6
Aa31LG4G5490 Aethionema arabicum HOM05D006278 ORTHO05D007526 1.6e-25 121.3 240 36.2
Oeu049934.1 Olea europaea HOM05D006278 ORTHO05D007526 1.6e-25 121.3 301 32.9
Peaxi162Scf00303g00043 Petunia axillaris HOM05D006278 ORTHO05D007526 1.6e-25 121.3 281 31.3
Eucgr.F01578 Eucalyptus grandis HOM05D006278 ORTHO05D007526 7.9e-25 119.0 223 34.5
MBI10_g18263_MAGBIO Magnolia biondii HOM05D006278 ORTHO05D007526 1.0e-24 118.6 233 35.6
AL2G35180 Arabidopsis lyrata HOM05D006278 ORTHO05D007526 2.3e-24 117.5 216 37.5
FAN20G2275 Fragaria x ananassa HOM05D006278 ORTHO05D007526 3.0e-24 117.1 281 32.4
Sp5g30420 Schrenkiella parvula HOM05D006278 ORTHO05D007526 5.1e-24 116.3 220 35.0
Nn2g14857 Nelumbo nucifera HOM05D006278 ORTHO05D007526 6.7e-24 115.9 189 37.6
AT1G75260 Arabidopsis thaliana HOM05D006278 ORTHO05D007526 1.1e-23 115.2 217 36.9
Thhalv10018443m.g Eutrema salsugineum HOM05D006278 ORTHO05D007526 1.1e-23 115.2 190 37.9
THA.LOC104809215 Tarenaya hassleriana HOM05D006278 ORTHO05D007526 7.4e-23 112.5 239 33.5
Prupe.1G377800 Prunus persica HOM05D006278 ORTHO05D007526 1.7e-22 111.3 269 33.8
Carub.0002s2208 Capsella rubella HOM05D006278 ORTHO05D007526 3.7e-22 110.2 256 32.8
CARHR068590 Cardamine hirsuta HOM05D006278 ORTHO05D007526 4.8e-22 109.8 247 34.4
FvH4_2g39641 Fragaria vesca HOM05D006278 ORTHO05D007526 6.3e-22 109.4 282 31.2
BolC6t39956H Brassica oleracea HOM05D006278 ORTHO05D007526 8.2e-22 109.0 219 34.2
Nitab4.5_0000017g0170 Nicotiana tabacum HOM05D006278 ORTHO05D007526 8.2e-22 109.0 313 30.7
PGSC0003DMG400005375 Solanum tuberosum HOM05D006278 ORTHO05D007526 1.1e-21 108.6 316 32.3
BcaNung04385 Brassica carinata HOM05D006278 ORTHO05D007526 1.4e-21 108.2 256 32.4
A07p40840 Brassica napus HOM05D006278 ORTHO05D007526 2.4e-21 107.5 234 32.1
BraA07t31626Z Brassica rapa HOM05D006278 ORTHO05D007526 2.4e-21 107.5 234 32.1
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 5.3e-21 106.3 313 30.4
BcaC08g47365 Brassica carinata HOM05D006278 ORTHO05D007526 9.1e-21 105.5 265 32.5
SGA_v2.0_scaffold201G41409 Striga asiatica HOM05D006278 ORTHO05D007526 1.2e-20 105.1 277 31.4
C06p49230 Brassica napus HOM05D006278 ORTHO05D007526 2.0e-20 104.4 252 29.8
RcHm_v2.0_Chr6g0301251 Rosa chinensis HOM05D006278 ORTHO05D007526 3.4e-20 103.6 222 33.3
CAN.G1226.35 Capsicum annuum HOM05D006278 ORTHO05D007526 4.5e-20 103.2 296 28.4
CDE06G2487 Ceratophyllum demersum HOM05D006278 ORTHO05D007526 4.5e-20 103.2 213 35.7
Sed0000803 Sechium edule HOM05D006278 ORTHO05D007526 5.9e-20 102.8 297 31.0
CiPaw.03G096900 Carya illinoinensis HOM05D006278 ORTHO05D007526 1.3e-19 101.7 262 33.6
ClCG08G014920 Citrullus lanatus HOM05D006278 ORTHO05D007526 2.2e-19 100.9 189 32.8
CAN.G424.60 Capsicum annuum HOM05D006278 ORTHO05D007526 6.5e-19 99.4 271 29.2
Solyc04g080520.1 Solanum lycopersicum HOM05D006278 ORTHO05D007526 1.1e-18 98.6 287 28.6
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 1.1e-18 98.6 299 30.1
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 2.5e-18 97.4 285 29.1
Ah.05g169430 Amaranthus hybridus HOM05D006278 ORTHO05D007526 4.2e-18 96.7 216 33.8
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 4.2e-18 96.7 206 35.0
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 5.5e-18 96.3 206 34.5
FAN15G2069 Fragaria x ananassa HOM05D006278 ORTHO05D007526 1.6e-17 94.7 283 31.8
ECA247G1288 Erigeron canadensis HOM05D006278 ORTHO05D007526 3.6e-17 93.6 199 31.2
Nitab4.5_0002224g0110 Nicotiana tabacum HOM05D006278 ORTHO05D007526 3.6e-17 93.6 273 29.3
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 6.1e-17 92.8 221 31.2
HPP92_004792 Vanilla planifolia HOM05D006278 ORTHO05D007526 7.9e-17 92.4 219 30.6
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 5.2e-16 89.7 282 29.8
AUR62041670 Chenopodium quinoa HOM05D006278 ORTHO05D007526 6.7e-16 89.4 277 30.3
AUR62033855 Chenopodium quinoa HOM05D006278 ORTHO05D007526 2.0e-15 87.8 320 28.4
Lalb_Chr08g0245891 Lupinus albus HOM05D006278 ORTHO05D007526 2.6e-15 87.4 170 40.0
unitig_0.g2047 Utricularia gibba HOM05D006278 ORTHO05D007526 7.4e-15 85.9 178 34.8
CsaV3_2G028850 Cucumis sativus L. HOM05D006278 ORTHO05D007526 6.3e-14 82.8 274 25.5
CANSAT25G3418 Cannabis sativa HOM05D006278 ORTHO05D007526 3.1e-13 80.5 228 32.9
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 1.2e-12 78.6 286 25.9
Dinv39433 Davidia involucrata HOM05D006278 ORTHO05D007526 1.0e-11 75.5 191 32.5
Potri.005G228400 Populus trichocarpa HOM05D006278 ORTHO05D007526 1.7e-11 74.7 225 33.8
Oeu029831.2 Olea europaea HOM05D006278 ORTHO05D007526 8.5e-11 72.4 282 29.1
Sabra05G0176300 Salix brachista HOM05D006278 ORTHO05D007526 1.9e-10 71.2 155 34.8
Gohir.A03G079100 Gossypium hirsutum HOM05D000342 ORTHO05D000217 5.5e-10 69.7 196 34.2
CDE04G1483 Ceratophyllum demersum HOM05D003484 ORTHO05D004152 2.1e-09 67.8 278 29.9
Gohir.D02G095000 Gossypium hirsutum HOM05D000342 ORTHO05D000217 6.1e-09 66.2 196 32.1
Gorai.005G108300 Gossypium raimondii HOM05D000342 ORTHO05D000217 8.0e-09 65.9 196 32.7
TAR376G1184 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.0e-08 65.5 158 31.0
ECA232G2514 Erigeron canadensis HOM05D006278 ORTHO05D007526 1.2e-07 62.0 169 32.0
FAN27G0814 Fragaria x ananassa HOM05D006278 ORTHO05D007526 5.7e-07 59.7 247 26.7
TAR376G0700 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.7e-06 58.2 158 29.1
Nn5g29644 Nelumbo nucifera HOM05D006278 ORTHO05D007526 8.2e-06 55.8 198 26.8


User provided reference genes

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