Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7T5QAW Arachis hypogaea HOM05D006996 ORTHO05D008961 1.1e-49 199.5 91 100.0
arahy.Tifrunner.gnm1.ann1.BHY6M8 Arachis hypogaea HOM05D006996 ORTHO05D008961 1.1e-49 199.5 91 100.0
arahy.Tifrunner.gnm1.ann1.MSE8LU Arachis hypogaea HOM05D006996 ORTHO05D008961 1.1e-49 199.5 91 100.0
arahy.Tifrunner.gnm1.ann1.QWF8TS Arachis hypogaea HOM05D006996 ORTHO05D008961 1.1e-49 199.5 91 100.0
Glyma.12G194300 Glycine max HOM05D006996 ORTHO05D008961 6.9e-44 180.3 90 90.0
Lj3g0015321 Lotus japonicus HOM05D006996 ORTHO05D008961 4.5e-43 177.6 91 90.1
TPR.G4182 Trifolium pratense HOM05D006996 ORTHO05D008961 4.5e-43 177.6 91 89.0
Medtr2g088460 Medicago truncatula HOM05D006996 ORTHO05D008961 7.6e-43 176.8 90 87.8
Glyma.13G308300 Glycine max HOM05D006996 ORTHO05D008961 1.4e-41 172.6 90 86.7
Phvul.005G114700 Phaseolus vulgaris HOM05D006996 ORTHO05D008961 1.6e-40 169.1 89 83.1
Aa31LG1G19540 Aethionema arabicum HOM05D006996 ORTHO05D008961 4.6e-40 167.5 85 90.6
A10p03740 Brassica napus HOM05D006996 ORTHO05D008961 1.8e-39 165.6 85 90.6
C05p03440 Brassica napus HOM05D006996 ORTHO05D008961 1.8e-39 165.6 85 90.6
BolC5t29123H Brassica oleracea HOM05D006996 ORTHO05D008961 1.8e-39 165.6 85 90.6
BraA10t42647Z Brassica rapa HOM05D006996 ORTHO05D008961 1.8e-39 165.6 85 90.6
Eucgr.A01713 Eucalyptus grandis HOM05D006996 ORTHO05D008961 1.8e-39 165.6 85 85.9
BcaC07g42146 Brassica carinata HOM05D006996 ORTHO05D008961 2.3e-39 165.2 85 90.6
Thhalv10009219m.g Eutrema salsugineum HOM05D006996 ORTHO05D008961 2.3e-39 165.2 85 90.6
Sp1g04060 Schrenkiella parvula HOM05D006996 ORTHO05D008961 2.3e-39 165.2 85 90.6
SpUn0024_0080 Schrenkiella parvula HOM05D006996 ORTHO05D008961 2.3e-39 165.2 85 90.6
Carub.0001s0448 Capsella rubella HOM05D006996 ORTHO05D008961 3.0e-39 164.9 85 88.2
CiPaw.03G161100 Carya illinoinensis HOM05D006996 ORTHO05D008961 3.9e-39 164.5 85 84.7
C08p51920 Brassica napus HOM05D006996 ORTHO05D008961 5.1e-39 164.1 85 89.4
BolC8t52723H Brassica oleracea HOM05D006996 ORTHO05D008961 5.1e-39 164.1 85 89.4
BraA09t42088Z Brassica rapa HOM05D006996 ORTHO05D008961 5.1e-39 164.1 85 89.4
Duzib128G0982 Durio zibethinus HOM05D006996 ORTHO05D008961 6.7e-39 163.7 83 84.3
MELO3C018811.2 Cucumis melo HOM05D006996 ORTHO05D008961 8.7e-39 163.3 86 83.7
AL1G14970 Arabidopsis lyrata HOM05D006996 ORTHO05D008961 1.1e-38 162.9 85 89.4
AT1G05205 Arabidopsis thaliana HOM05D006996 ORTHO05D008961 1.1e-38 162.9 85 88.2
PGR042G2836 Punica granatum HOM05D006996 ORTHO05D008961 1.9e-38 162.2 85 83.5
Manes.13G070800 Manihot esculenta HOM05D006996 ORTHO05D008961 2.5e-38 161.8 85 81.2
Cfa014416 Carpinus fangiana HOM05D006996 ORTHO05D008961 3.3e-38 161.4 85 82.4
MD09G1069700 Malus domestica HOM05D006996 ORTHO05D008961 3.3e-38 161.4 85 84.7
MD17G1095900 Malus domestica HOM05D006996 ORTHO05D008961 3.3e-38 161.4 85 84.7
Ciclev10017328m.g Citrus clementina HOM05D006996 ORTHO05D008961 4.3e-38 161.0 85 83.5
Thecc.05G208500 Theobroma cacao HOM05D006996 ORTHO05D008961 4.3e-38 161.0 82 84.1
Gohir.A02G139400 Gossypium hirsutum HOM05D006996 ORTHO05D008961 5.6e-38 160.6 83 83.1
Gohir.D03G050100 Gossypium hirsutum HOM05D006996 ORTHO05D008961 5.6e-38 160.6 83 83.1
Gorai.003G051600 Gossypium raimondii HOM05D006996 ORTHO05D008961 5.6e-38 160.6 83 83.1
CANSAT64G1676 Cannabis sativa HOM05D006996 ORTHO05D008961 7.4e-38 160.2 85 81.2
CARHR004680 Cardamine hirsuta HOM05D006996 ORTHO05D008961 7.4e-38 160.2 85 88.2
CsaV3_7G003680 Cucumis sativus L. HOM05D006996 ORTHO05D008961 7.4e-38 160.2 85 82.4
Prupe.3G218000 Prunus persica HOM05D006996 ORTHO05D008961 7.4e-38 160.2 85 83.5
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 1.3e-37 159.5 83 83.1
THA.LOC104800987 Tarenaya hassleriana HOM05D006996 ORTHO05D008961 1.3e-37 159.5 85 85.9
QL08p033312 Quercus lobata HOM05D006996 ORTHO05D008961 1.6e-37 159.1 85 81.2
Sed0014620 Sechium edule HOM05D006996 ORTHO05D008961 2.1e-37 158.7 85 82.4
MSTRG.6557 Avicennia marina HOM05D006996 ORTHO05D008961 6.2e-37 157.1 85 84.7
Dinv05447 Davidia involucrata HOM05D006996 ORTHO05D008961 6.2e-37 157.1 81 84.0
TWI18G0629 Tripterygium wilfordii HOM05D006996 ORTHO05D008961 6.2e-37 157.1 85 80.0
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 6.2e-37 157.1 84 82.1
Zm00001eb209620 Zea mays HOM05D006996 ORTHO05D008961 6.2e-37 157.1 84 82.1
Peaxi162Scf00007g00930 Petunia axillaris HOM05D006996 ORTHO05D008961 8.1e-37 156.8 83 86.7
RcHm_v2.0_Chr2g0159651 Rosa chinensis HOM05D006996 ORTHO05D008961 1.1e-36 156.4 85 81.2
Sopen07g026050 Solanum pennellii HOM05D006996 ORTHO05D008961 1.1e-36 156.4 78 87.2
Lalb_Chr14g0375741 Lupinus albus HOM05D006996 ORTHO05D008961 1.8e-36 155.6 87 80.5
Dinv39702 Davidia involucrata HOM05D006996 ORTHO05D008961 2.4e-36 155.2 81 82.7
FvH4_6g43320 Fragaria vesca HOM05D006996 ORTHO05D008961 2.4e-36 155.2 85 80.0
FAN05G4357 Fragaria x ananassa HOM05D006996 ORTHO05D008961 2.4e-36 155.2 85 80.0
FAN14G3455 Fragaria x ananassa HOM05D006996 ORTHO05D008961 2.4e-36 155.2 85 80.0
Nitab4.5_0007092g0010 Nicotiana tabacum HOM05D006996 ORTHO05D008961 2.4e-36 155.2 83 86.7
PGSC0003DMG400025488 Solanum tuberosum HOM05D006996 ORTHO05D008961 2.4e-36 155.2 78 85.9
ClCG02G001860 Citrullus lanatus HOM05D006996 ORTHO05D008961 3.1e-36 154.8 85 81.2
Cc05_g04850 Coffea canephora HOM05D006996 ORTHO05D008961 3.1e-36 154.8 85 81.2
Solyc07g052420.3 Solanum lycopersicum HOM05D006996 ORTHO05D008961 3.1e-36 154.8 78 84.6
CDE05G0144 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 4.0e-36 154.5 80 83.8
Lj1A759T40 Lonicera japonica HOM05D006996 ORTHO05D008961 5.3e-36 154.1 85 78.8
Lj1A760T24 Lonicera japonica HOM05D006996 ORTHO05D008961 5.3e-36 154.1 85 78.8
Nitab4.5_0002137g0190 Nicotiana tabacum HOM05D006996 ORTHO05D008961 6.9e-36 153.7 83 84.3
GSVIVG01012649001 Vitis vinifera HOM05D006996 ORTHO05D008961 6.9e-36 153.7 79 83.5
unitig_21.g20728 Utricularia gibba HOM05D006996 ORTHO05D008961 9.0e-36 153.3 80 82.5
CDE11G0800 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 2.0e-35 152.1 83 80.7
PSO541G2316 Papaver somniferum HOM05D006996 ORTHO05D008961 2.6e-35 151.8 86 80.2
PSO675G8615 Papaver somniferum HOM05D006996 ORTHO05D008961 2.6e-35 151.8 86 80.2
Sabra18G0080400 Salix brachista HOM05D006996 ORTHO05D008961 2.6e-35 151.8 77 83.1
FAN02G2509 Fragaria x ananassa HOM05D006996 ORTHO05D008961 3.4e-35 151.4 85 78.8
Oeu027249.1 Olea europaea HOM05D006996 ORTHO05D008961 4.5e-35 151.0 85 80.0
CSS0007447 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 5.8e-35 150.6 84 77.4
Migut.M00413 Erythranthe guttata HOM05D006996 ORTHO05D008961 5.8e-35 150.6 85 81.2
vmacro09127 Vaccinium macrocarpon HOM05D006996 ORTHO05D008961 5.8e-35 150.6 84 77.4
Potri.018G093501 Populus trichocarpa HOM05D006996 ORTHO05D008961 7.6e-35 150.2 77 81.8
Hma1.2p1_0957F.1_g241430 Hydrangea macrophylla HOM05D006996 ORTHO05D008961 9.9e-35 149.8 80 81.2
HPP92_011134 Vanilla planifolia HOM05D006996 ORTHO05D008961 1.3e-34 149.4 86 77.9
CSS0016840 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.7e-34 149.1 84 77.4
CAN.G846.6 Capsicum annuum HOM05D006996 ORTHO05D008961 4.9e-34 147.5 78 82.1
Lsat_1_v5_gn_5_163860 Lactuca sativa HOM05D006996 ORTHO05D008961 4.9e-34 147.5 81 80.2
Ah.11g047700 Amaranthus hybridus HOM05D006996 ORTHO05D008961 8.4e-34 146.7 78 79.5
ECA248G0348 Erigeron canadensis HOM05D006996 ORTHO05D008961 1.4e-33 146.0 85 78.8
Actinidia30517 Actinidia chinensis HOM05D006996 ORTHO05D008961 4.2e-33 144.4 83 78.3
EL10Ac5g11141 Beta vulgaris HOM05D006996 ORTHO05D008961 4.2e-33 144.4 78 78.2
HanXRQChr11g0350381 Helianthus annuus HOM05D006996 ORTHO05D008961 4.2e-33 144.4 85 80.0
Hund01114 Selenicereus undatus HOM05D006996 ORTHO05D008961 2.1e-32 142.1 78 79.5
AUR62021549 Chenopodium quinoa HOM05D006996 ORTHO05D008961 4.6e-32 141.0 82 76.8
Nn2g12174 Nelumbo nucifera HOM05D006996 ORTHO05D008961 4.6e-32 141.0 103 64.1
AUR62000730 Chenopodium quinoa HOM05D006996 ORTHO05D008961 1.0e-31 139.8 82 75.6
AUR62008544 Chenopodium quinoa HOM05D006996 ORTHO05D008961 2.3e-31 138.7 82 76.8
SalBow7G3715 Salvia bowleyana HOM05D006996 ORTHO05D008961 5.1e-31 137.5 86 75.6
Psat5g264240 Pisum sativum HOM05D006996 ORTHO05D008961 8.7e-31 136.7 64 92.2
CSS0029979 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 5.8e-27 124.0 68 76.5
DCAR_014473 Daucus carota HOM05D006996 ORTHO05D008961 2.9e-26 121.7 65 83.1
Sc12g0002320 Simmondsia chinensis HOM05D006996 ORTHO05D008961 2.9e-26 121.7 62 82.3
Lsat_1_v5_gn_4_184120 Lactuca sativa HOM05D006996 ORTHO05D008961 9.3e-25 116.7 61 78.7
TAR627G0363 Trochodendron aralioides HOM05D006996 ORTHO05D008961 2.7e-24 115.2 61 80.3
COL.COLO4_06384 Corchorus olitorius HOM05D006996 ORTHO05D008961 5.3e-20 100.9 47 91.5
TAR676G0001 Trochodendron aralioides HOM05D006996 ORTHO05D008961 4.5e-19 97.8 54 75.9
Mapoly0024s0016 Marchantia polymorpha HOM05D006996 ORTHO05D008961 1.1e-17 93.2 56 62.5
MCO13G082 Micromonas commoda HOM05D006996 ORTHO05D008961 2.5e-14 82.0 58 62.1
SEGI_13346 Sequoiadendron giganteum HOM05D006996 ORTHO05D008961 1.3e-13 79.7 61 55.7
TPR.G35081 Trifolium pratense HOM05D006996 ORTHO05D048925 1.7e-13 79.3 41 85.4
BcaB01g06120 Brassica carinata HOM05D006996 ORTHO05D008961 8.2e-13 77.0 42 85.7
FAN09G4817 Fragaria x ananassa HOM05D006996 ORTHO05D008961 5.0e-10 67.8 38 76.3
CSS0002917 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.9e-09 65.9 40 70.0
CSS0018135 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.6e-08 62.8 40 65.0


User provided reference genes

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