Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7Q31U7 Arachis hypogaea HOM05D002316 ORTHO05D002280 3.1e-182 641.7 341 100.0
arahy.Tifrunner.gnm1.ann1.GJ1EJQ Arachis hypogaea HOM05D002316 ORTHO05D002280 5.3e-174 614.4 341 95.6
Glyma.03G262900 Glycine max HOM05D002316 ORTHO05D002280 8.5e-87 324.7 388 52.6
Lalb_Chr15g0076661 Lupinus albus HOM05D002316 ORTHO05D002280 1.9e-86 323.6 398 52.5
Lj1g0006356 Lotus japonicus HOM05D002316 ORTHO05D002280 6.1e-85 318.5 388 53.4
VMungo1309G0979 Vigna mungo HOM05D002316 ORTHO05D002280 1.5e-83 313.9 389 50.9
Glyma.19G262000 Glycine max HOM05D002316 ORTHO05D002280 1.6e-82 310.5 384 52.1
GSVIVG01016660001 Vitis vinifera HOM05D002316 ORTHO05D002280 3.7e-82 309.3 395 50.9
Phvul.009G261100 Phaseolus vulgaris HOM05D002316 ORTHO05D002280 6.3e-82 308.5 392 50.8
Lalb_Chr04g0253971 Lupinus albus HOM05D002316 ORTHO05D002280 8.2e-82 308.1 384 51.6
Ca_09566_v3 Cicer arietinum L. HOM05D002316 ORTHO05D002280 1.1e-81 307.8 385 50.6
Lalb_Chr17g0343181 Lupinus albus HOM05D002316 ORTHO05D002280 5.3e-81 305.4 387 50.1
arahy.Tifrunner.gnm1.ann1.JMV1FI Arachis hypogaea HOM05D002316 ORTHO05D002280 5.0e-79 298.9 371 50.9
Lalb_Chr04g0261261 Lupinus albus HOM05D002316 ORTHO05D002280 1.9e-78 297.0 381 51.4
Medtr7g117530 Medicago truncatula HOM05D002316 ORTHO05D002280 1.9e-78 297.0 388 51.0
arahy.Tifrunner.gnm1.ann1.82DMKZ Arachis hypogaea HOM05D002316 ORTHO05D002280 6.1e-77 292.0 388 48.7
Dinv37816 Davidia involucrata HOM05D002316 ORTHO05D002280 3.9e-76 289.3 415 47.0
TPR.G28875 Trifolium pratense HOM05D002316 ORTHO05D002280 5.1e-76 288.9 390 48.7
Atru.chr1.4173 Acer truncatum HOM05D002316 ORTHO05D002280 2.6e-75 286.6 393 48.1
Psat0s3082g0160 Pisum sativum HOM05D002316 ORTHO05D002280 4.4e-75 285.8 366 51.1
CiPaw.02G130400 Carya illinoinensis HOM05D002316 ORTHO05D002280 7.4e-75 285.0 399 46.1
Gorai.009G148300 Gossypium raimondii HOM05D002316 ORTHO05D002280 1.3e-74 284.3 391 47.6
QL05p001077 Quercus lobata HOM05D002316 ORTHO05D002280 1.3e-74 284.3 395 48.1
QL05p000933 Quercus lobata HOM05D002316 ORTHO05D002280 6.3e-74 282.0 395 48.4
Gohir.A05G142100 Gossypium hirsutum HOM05D002316 ORTHO05D002280 8.2e-74 281.6 391 47.1
Thecc.06G131100 Theobroma cacao HOM05D002316 ORTHO05D002280 1.0e-71 274.6 400 45.2
Sed0002975 Sechium edule HOM05D002316 ORTHO05D002280 8.5e-71 271.6 386 47.2
Manes.04G151600 Manihot esculenta HOM05D002316 ORTHO05D002280 1.4e-70 270.8 393 45.5
MBI19_g32879_MAGBIO Magnolia biondii HOM05D002316 ORTHO05D002280 3.2e-70 269.6 405 46.7
Lj3g0022142 Lotus japonicus HOM05D002316 ORTHO05D002280 4.2e-70 269.2 359 49.3
COL.COLO4_30878 Corchorus olitorius HOM05D002316 ORTHO05D002280 1.6e-69 267.3 396 44.2
ClCG07G014240 Citrullus lanatus HOM05D002316 ORTHO05D002280 3.6e-69 266.2 388 46.1
Gohir.D10G050800 Gossypium hirsutum HOM05D002316 ORTHO05D002280 3.6e-69 266.2 391 45.0
Potri.003G073400 Populus trichocarpa HOM05D002316 ORTHO05D002280 4.7e-69 265.8 391 45.8
Cpa.g.sc25.201 Carica papaya HOM05D002316 ORTHO05D002280 6.1e-69 265.4 332 51.2
CSS0017215 Camellia sinensis var. sinensis HOM05D002316 ORTHO05D002280 1.8e-68 263.8 389 46.8
Actinidia21843 Actinidia chinensis HOM05D002316 ORTHO05D002280 2.3e-68 263.5 406 44.8
Dinv20376 Davidia involucrata HOM05D002316 ORTHO05D002280 5.2e-68 262.3 409 45.2
Sabra03G0044000 Salix brachista HOM05D002316 ORTHO05D002280 5.2e-68 262.3 391 45.3
CANSAT56G3763 Cannabis sativa HOM05D002316 ORTHO05D002280 6.7e-68 261.9 408 46.6
PSO724G1377 Papaver somniferum HOM05D002316 ORTHO05D002280 1.1e-67 261.2 288 54.9
Potri.001G161900 Populus trichocarpa HOM05D002316 ORTHO05D002280 1.1e-67 261.2 393 43.8
Duzib192G1048 Durio zibethinus HOM05D002316 ORTHO05D002280 2.0e-67 260.4 396 45.2
Ciclev10025233m.g Citrus clementina HOM05D002316 ORTHO05D002280 4.4e-67 259.2 399 45.4
Cfa003455 Carpinus fangiana HOM05D002316 ORTHO05D002280 9.7e-67 258.1 386 46.4
Gohir.D05G144400 Gossypium hirsutum HOM05D002316 ORTHO05D002280 9.7e-67 258.1 251 58.2
Lj5A28T49 Lonicera japonica HOM05D002316 ORTHO05D002280 9.7e-67 258.1 396 41.9
Nn6g35747 Nelumbo nucifera HOM05D002316 ORTHO05D002280 9.7e-67 258.1 240 60.4
Duzib235G0584 Durio zibethinus HOM05D002316 ORTHO05D002280 1.3e-66 257.7 399 44.4
BcaB07g33301 Brassica carinata HOM05D002316 ORTHO05D002280 4.8e-66 255.8 365 47.1
BraA06t23311Z Brassica rapa HOM05D002316 ORTHO05D002280 6.3e-66 255.4 357 45.1
BcaC08g43557 Brassica carinata HOM05D002316 ORTHO05D002280 8.2e-66 255.0 357 46.2
C06p09560 Brassica napus HOM05D002316 ORTHO05D002280 8.2e-66 255.0 357 46.2
BolC6t36030H Brassica oleracea HOM05D002316 ORTHO05D002280 8.2e-66 255.0 357 46.2
PSO135G1018 Papaver somniferum HOM05D002316 ORTHO05D002280 8.2e-66 255.0 290 54.1
A06p00770 Brassica napus HOM05D002316 ORTHO05D002280 1.1e-65 254.6 357 45.1
CsaV3_3G031100 Cucumis sativus L. HOM05D002316 ORTHO05D002280 1.8e-65 253.8 389 45.0
Gohir.A10G050200 Gossypium hirsutum HOM05D002316 ORTHO05D002280 1.8e-65 253.8 391 43.0
Thhalv10011340m.g Eutrema salsugineum HOM05D002316 ORTHO05D002280 3.1e-65 253.1 407 43.7
Sabra01G0130600 Salix brachista HOM05D002316 ORTHO05D002280 3.1e-65 253.1 390 44.6
BcaC08g44130 Brassica carinata HOM05D002316 ORTHO05D002280 5.3e-65 252.3 370 44.6
C06p15300 Brassica napus HOM05D002316 ORTHO05D002280 5.3e-65 252.3 370 44.6
Cc04_g00630 Coffea canephora HOM05D002316 ORTHO05D002280 5.3e-65 252.3 316 50.0
BcaB02g10892 Brassica carinata HOM05D002316 ORTHO05D002280 9.1e-65 251.5 379 45.1
BolC6t36705H Brassica oleracea HOM05D002316 ORTHO05D002280 9.1e-65 251.5 370 44.3
Sc15g0000830 Simmondsia chinensis HOM05D002316 ORTHO05D002280 1.2e-64 251.1 377 44.8
A05p17910 Brassica napus HOM05D002316 ORTHO05D002280 1.6e-64 250.8 373 44.2
AL1G62470 Arabidopsis lyrata HOM05D002316 ORTHO05D002280 2.6e-64 250.0 405 43.0
Oeu013438.1 Olea europaea HOM05D002316 ORTHO05D002280 2.6e-64 250.0 393 43.5
TAR375G0959 Trochodendron aralioides HOM05D002316 ORTHO05D002280 2.6e-64 250.0 395 44.3
BraA05t20684Z Brassica rapa HOM05D002316 ORTHO05D002280 3.5e-64 249.6 374 43.9
AT1G53800 Arabidopsis thaliana HOM05D002316 ORTHO05D002280 4.5e-64 249.2 396 42.4
FAN02G0802 Fragaria x ananassa HOM05D002316 ORTHO05D002280 1.0e-63 248.1 271 55.7
MD17G1154900 Malus domestica HOM05D002316 ORTHO05D002280 1.3e-63 247.7 241 59.3
Eucgr.J02589 Eucalyptus grandis HOM05D002316 ORTHO05D002280 2.9e-63 246.5 246 57.7
FAN14G1755 Fragaria x ananassa HOM05D002316 ORTHO05D002280 5.0e-63 245.7 271 55.4
FAN14G3860 Fragaria x ananassa HOM05D002316 ORTHO05D002280 5.0e-63 245.7 271 55.4
PGR102G1833 Punica granatum HOM05D002316 ORTHO05D002280 6.5e-63 245.4 251 55.8
Carub.0001s4305 Capsella rubella HOM05D002316 ORTHO05D002280 8.5e-63 245.0 405 42.2
FvH4_6g35990 Fragaria vesca HOM05D002316 ORTHO05D002280 8.5e-63 245.0 271 55.4
FAN09G2036 Fragaria x ananassa HOM05D002316 ORTHO05D002280 1.1e-62 244.6 271 55.0
FAN05G5339 Fragaria x ananassa HOM05D002316 ORTHO05D002280 1.5e-62 244.2 271 55.0
MBI13_g41710_MAGBIO Magnolia biondii HOM05D002316 ORTHO05D002280 1.9e-62 243.8 398 41.5
PGR119G0057 Punica granatum HOM05D002316 ORTHO05D002280 2.5e-62 243.4 351 44.7
Aa31LG10G1510 Aethionema arabicum HOM05D002316 ORTHO05D002280 3.2e-62 243.0 353 43.3
CiPaw.01G210800 Carya illinoinensis HOM05D002316 ORTHO05D002280 1.2e-61 241.1 382 42.4
Nitab4.5_0006966g0030 Nicotiana tabacum HOM05D002316 ORTHO05D002280 2.1e-61 240.4 321 49.8
ATR0053G043 Amborella trichopoda HOM05D002316 ORTHO05D002280 2.7e-61 240.0 389 40.9
CDE10G0003 Ceratophyllum demersum HOM05D002316 ORTHO05D002280 8.0e-61 238.4 312 48.7
MELO3C026660.2 Cucumis melo HOM05D002316 ORTHO05D002280 8.0e-61 238.4 388 42.0
Solyc03g123700.4 Solanum lycopersicum HOM05D002316 ORTHO05D002280 8.0e-61 238.4 326 47.9
Aqoxy7G00923 Aquilegia oxysepala HOM05D002316 ORTHO05D002280 1.0e-60 238.0 326 46.3
DCAR_016087 Daucus carota HOM05D002316 ORTHO05D002280 1.4e-60 237.7 318 48.1
Sp1g40300 Schrenkiella parvula HOM05D002316 ORTHO05D002280 1.4e-60 237.7 402 42.3
Nitab4.5_0006338g0020 Nicotiana tabacum HOM05D002316 ORTHO05D002280 2.3e-60 236.9 323 49.2
Sopen03g041470 Solanum pennellii HOM05D002316 ORTHO05D002280 3.0e-60 236.5 326 47.9
TWI14G0140 Tripterygium wilfordii HOM05D002316 ORTHO05D002280 3.0e-60 236.5 408 42.2
CARHR044090 Cardamine hirsuta HOM05D002316 ORTHO05D002280 6.7e-60 235.3 377 43.2
Prupe.3G030400 Prunus persica HOM05D002316 ORTHO05D002280 6.7e-60 235.3 225 60.9
unitig_32.g10996 Utricularia gibba HOM05D002316 ORTHO05D002280 8.8e-60 235.0 369 43.9
Rhsim08G0245400 Rhododendron simsii HOM05D002316 ORTHO05D002280 1.2e-59 234.6 403 41.9
PGSC0003DMG400009152 Solanum tuberosum HOM05D002316 ORTHO05D002280 1.5e-59 234.2 326 46.6
THA.LOC104810398 Tarenaya hassleriana HOM05D002316 ORTHO05D002280 1.5e-59 234.2 420 41.9
CAN.G790.53 Capsicum annuum HOM05D002316 ORTHO05D002280 2.0e-59 233.8 350 46.6
MD09G1172000 Malus domestica HOM05D002316 ORTHO05D002280 2.6e-59 233.4 291 50.2
Peaxi162Scf00038g02328 Petunia axillaris HOM05D002316 ORTHO05D002280 4.4e-59 232.6 330 47.0
Migut.D00907 Erythranthe guttata HOM05D002316 ORTHO05D002280 9.7e-59 231.5 354 44.1
THA.LOC104815594 Tarenaya hassleriana HOM05D002316 ORTHO05D002280 1.7e-58 230.7 405 40.7
Gorai.011G054500 Gossypium raimondii HOM05D002316 ORTHO05D002280 2.8e-58 229.9 378 42.6
TWI59G0933 Tripterygium wilfordii HOM05D002316 ORTHO05D002280 3.7e-58 229.6 407 43.5
Actinidia24418 Actinidia chinensis HOM05D002316 ORTHO05D002280 1.8e-57 227.3 246 54.5
CDE10G1231 Ceratophyllum demersum HOM05D002316 ORTHO05D002280 1.8e-57 227.3 388 41.2
AUR62007994 Chenopodium quinoa HOM05D002316 ORTHO05D002280 9.1e-57 224.9 388 40.7
Eucgr.I02167 Eucalyptus grandis HOM05D002316 ORTHO05D002280 1.6e-56 224.2 384 41.1
RcHm_v2.0_Chr2g0148111 Rosa chinensis HOM05D002316 ORTHO05D002280 4.5e-56 222.6 268 51.1
Ah.15g094840 Amaranthus hybridus HOM05D002316 ORTHO05D002280 5.9e-56 222.2 268 50.4
AUR62003176 Chenopodium quinoa HOM05D002316 ORTHO05D002280 5.9e-56 222.2 388 43.0
DCAR_022638 Daucus carota HOM05D002316 ORTHO05D002280 2.2e-55 220.3 251 53.8
Migut.I01139 Erythranthe guttata HOM05D002316 ORTHO05D002280 5.0e-55 219.2 400 39.5
vmacro18716 Vaccinium macrocarpon HOM05D002316 ORTHO05D002280 8.5e-55 218.4 422 39.3
HPP92_027909 Vanilla planifolia HOM05D002316 ORTHO05D002280 1.6e-53 214.2 375 41.3
EL10Ac6g14924 Beta vulgaris HOM05D002316 ORTHO05D002280 2.1e-53 213.8 422 37.0
TAR624G0517 Trochodendron aralioides HOM05D002316 ORTHO05D002280 1.2e-51 208.0 295 45.4
HPP92_024371 Vanilla planifolia HOM05D002316 ORTHO05D002280 5.7e-51 205.7 313 46.3
HPP92_024475 Vanilla planifolia HOM05D002316 ORTHO05D002280 1.7e-50 204.1 378 40.7
Ah.03g139400 Amaranthus hybridus HOM05D002316 ORTHO05D002280 6.3e-50 202.2 397 38.3
Os10g0198600 Oryza sativa ssp. japonica HOM05D002316 ORTHO05D002280 8.3e-50 201.8 312 41.3
Zm00001eb066360 Zea mays HOM05D002316 ORTHO05D002280 9.1e-49 198.4 340 41.2
SGA_v2.0_scaffold122G33301 Striga asiatica HOM05D000070 ORTHO05D002280 1.1e-46 191.4 332 41.9
SGA_v2.0_scaffold71G23943 Striga asiatica HOM05D002316 ORTHO05D002280 3.0e-44 183.3 382 37.4
Hund18629 Selenicereus undatus HOM05D002316 ORTHO05D002280 5.2e-44 182.6 255 46.3
HanXRQChr12g0360051 Helianthus annuus HOM05D002316 ORTHO05D002280 3.7e-42 176.4 379 37.2
SalBow6G6393 Salvia bowleyana HOM05D002316 ORTHO05D002280 3.1e-41 173.3 405 35.1
ECA234G4725 Erigeron canadensis HOM05D002316 ORTHO05D002280 9.2e-41 171.8 362 38.7
Lsat_1_v5_gn_5_137661 Lactuca sativa HOM05D002316 ORTHO05D002280 1.0e-39 168.3 384 37.5
Hund18630 Selenicereus undatus HOM05D002316 ORTHO05D002280 8.6e-39 165.2 241 45.6
SEGI_28906 Sequoiadendron giganteum HOM05D002316 ORTHO05D002280 2.8e-37 160.2 229 44.1
CDE05G3243 Ceratophyllum demersum HOM05D002316 ORTHO05D002280 3.6e-37 159.8 110 66.4
Sed0007223 Sechium edule HOM05D002316 ORTHO05D002280 1.8e-36 157.5 385 39.0
arahy.Tifrunner.gnm1.ann1.RGSX4D Arachis hypogaea HOM05D002316 ORTHO05D002280 4.7e-29 132.9 94 67.0
HanXRQChr02g0033821 Helianthus annuus HOM05D002316 ORTHO05D002280 1.4e-28 131.3 203 42.9
SEGI_23297 Sequoiadendron giganteum HOM05D002316 ORTHO05D002280 5.2e-28 129.4 233 38.6
CSS0001569 Camellia sinensis var. sinensis HOM05D002316 ORTHO05D002280 8.9e-28 128.6 94 64.9
CSS0010846 Camellia sinensis var. sinensis HOM05D002316 ORTHO05D002280 8.9e-28 128.6 94 64.9
CSS0037592 Camellia sinensis var. sinensis HOM05D002316 ORTHO05D002280 8.9e-28 128.6 94 64.9
Rhsim08G0245300 Rhododendron simsii HOM05D002316 ORTHO05D002280 1.2e-27 128.3 177 44.1
arahy.Tifrunner.gnm1.ann1.3AJ3RF Arachis hypogaea HOM05D002316 ORTHO05D002280 5.8e-27 125.9 221 39.4
HanXRQChr10g0311621 Helianthus annuus HOM05D002316 ORTHO05D002280 1.3e-26 124.8 363 32.8
CSS0007790 Camellia sinensis var. sinensis HOM05D002316 ORTHO05D002280 2.9e-26 123.6 94 62.8
arahy.Tifrunner.gnm1.ann1.L7TQPJ Arachis hypogaea HOM05D002316 ORTHO05D002280 1.9e-25 120.9 116 53.4
SEGI_25181 Sequoiadendron giganteum HOM05D002316 ORTHO05D002280 6.6e-23 112.5 226 35.4
Mapoly0056s0004 Marchantia polymorpha HOM05D002316 ORTHO05D002280 9.5e-22 108.6 297 32.3
vmacro18717 Vaccinium macrocarpon HOM05D002316 ORTHO05D002280 2.8e-21 107.1 94 56.4
CSS0023276 Camellia sinensis var. sinensis HOM05D002316 ORTHO05D002280 3.1e-20 103.6 75 64.0
Hund05697 Selenicereus undatus HOM05D002316 ORTHO05D002280 6.8e-20 102.4 173 41.6
vmacro18773 Vaccinium macrocarpon HOM05D002316 ORTHO05D002280 2.2e-18 97.4 100 49.0
SMO347G0244 Selaginella moellendorffii HOM05D002316 ORTHO05D002280 1.9e-17 94.4 312 29.8
Pp3c20_11380 Physcomitrium patens HOM05D002316 ORTHO05D002280 2.4e-17 94.0 332 28.3
Duzib160G0897 Durio zibethinus HOM05D002316 ORTHO05D002280 7.8e-16 89.0 129 45.0
arahy.Tifrunner.gnm1.ann1.VE80E0 Arachis hypogaea HOM05D002316 ORTHO05D002280 1.0e-15 88.6 62 69.4
Psat1g193320 Pisum sativum HOM05D002316 ORTHO05D019804 8.6e-15 85.5 90 51.1
Pp3c23_5090 Physcomitrium patens HOM05D002316 ORTHO05D002280 1.6e-13 81.3 334 27.8
AagrBONN_evm.TU.Sc2ySwM_362.2355 Anthoceros agrestis HOM05D002316 ORTHO05D002280 2.1e-13 80.9 211 31.8
Lj9C539G6 Lonicera japonica HOM05D002316 ORTHO05D002280 1.4e-09 68.2 57 52.6
ATR0733G115 Amborella trichopoda HOM05D002316 ORTHO05D002280 4.1e-09 66.6 80 43.8
Lj9A539T86 Lonicera japonica HOM05D002316 ORTHO05D002280 4.6e-08 63.2 188 34.0
CBR_g30616 Chara braunii HOM05D002316 ORTHO05D002280 1.1e-06 58.5 274 25.2


User provided reference genes

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