Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7PH810 Arachis hypogaea HOM05D003578 ORTHO05D004021 1.4e-60 236.1 119 100.0
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 3.7e-29 131.7 111 71.2
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 1.0e-26 123.6 110 67.3
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 8.4e-26 120.6 111 67.6
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 8.4e-26 120.6 111 66.7
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 2.7e-24 115.5 111 64.0
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 4.3e-22 108.2 102 57.8
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 2.5e-17 92.4 105 55.2
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 2.0e-14 82.8 107 50.5
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 2.0e-14 82.8 107 50.5
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 1.3e-13 80.1 107 52.3
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 2.9e-10 68.9 99 49.5
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 2.9e-10 68.9 122 42.6
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 5.0e-10 68.2 99 49.5
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 1.1e-09 67.0 113 40.7
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 1.9e-09 66.2 113 39.8
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 9.4e-09 63.9 102 42.2
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 9.4e-09 63.9 102 42.2
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 4.7e-08 61.6 110 40.9
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 6.1e-08 61.2 100 44.0
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 1.4e-07 60.1 110 38.2
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 3.0e-07 58.9 82 42.7
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 8.8e-07 57.4 110 40.9
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 8.8e-07 57.4 110 34.5
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 1.1e-06 57.0 103 42.7
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 1.5e-06 56.6 103 43.7
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 1.5e-06 56.6 91 40.7
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 2.0e-06 56.2 113 38.1
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 5.7e-06 54.7 90 40.0
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 5.7e-06 54.7 90 40.0
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 5.7e-06 54.7 91 39.6
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 5.7e-06 54.7 108 39.8
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 9.7e-06 53.9 104 40.4
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 9.7e-06 53.9 89 43.8


User provided reference genes

Program Settings