Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7M6WCL Arachis hypogaea HOM05D001663 ORTHO05D005717 6.5e-271 936.8 474 100.0
Lj1g0004140 Lotus japonicus HOM05D001663 ORTHO05D005717 4.9e-234 814.3 476 87.2
Ca_26536_v3 Cicer arietinum L. HOM05D001663 ORTHO05D005717 7.8e-232 807.0 476 86.6
Lalb_Chr10g0102081 Lupinus albus HOM05D001663 ORTHO05D005717 8.1e-229 797.0 476 85.5
TPR.G30426 Trifolium pratense HOM05D001663 ORTHO05D005717 4.0e-228 794.7 476 86.1
Phvul.008G169200 Phaseolus vulgaris HOM05D001663 ORTHO05D005717 2.0e-227 792.3 477 85.5
Medtr5g061040 Medicago truncatula HOM05D001663 ORTHO05D005717 3.4e-227 791.6 471 85.6
Lalb_Chr04g0253241 Lupinus albus HOM05D001663 ORTHO05D005717 5.6e-222 774.2 476 83.2
Glyma.13G085400 Glycine max HOM05D001663 ORTHO05D005717 3.8e-218 761.5 476 82.8
Dinv44724 Davidia involucrata HOM05D001663 ORTHO05D005717 1.1e-209 733.4 479 77.5
FvH4_5g38340 Fragaria vesca HOM05D001663 ORTHO05D005717 4.8e-205 718.0 477 76.9
FAN18G1299 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.8e-204 716.1 473 77.4
Prupe.1G508500 Prunus persica HOM05D001663 ORTHO05D005717 5.3e-204 714.5 479 75.6
Ciclev10001001m.g Citrus clementina HOM05D001663 ORTHO05D005717 6.9e-204 714.1 479 76.0
FAN08G2783 Fragaria x ananassa HOM05D001663 ORTHO05D005717 2.6e-203 712.2 473 77.2
GSVIVG01008963001 Vitis vinifera HOM05D001663 ORTHO05D005717 2.6e-203 712.2 479 75.2
COL.COLO4_16510 Corchorus olitorius HOM05D001663 ORTHO05D005717 2.9e-202 708.8 479 77.0
Rhsim07G0199300 Rhododendron simsii HOM05D001663 ORTHO05D005717 4.9e-202 708.0 479 75.8
FAN04G0194 Fragaria x ananassa HOM05D001663 ORTHO05D005717 8.4e-202 707.2 476 75.8
Manes.18G101600 Manihot esculenta HOM05D001663 ORTHO05D005717 5.5e-201 704.5 479 74.5
Duzib041G0602 Durio zibethinus HOM05D001663 ORTHO05D005717 1.3e-199 699.9 479 75.8
Glyma.14G167200 Glycine max HOM05D001663 ORTHO05D005717 3.0e-199 698.7 410 87.6
RhsimUnG0073000 Rhododendron simsii HOM05D001663 ORTHO05D005717 3.9e-199 698.4 479 75.4
Nn5g28968 Nelumbo nucifera HOM05D001663 ORTHO05D005717 1.1e-198 696.8 479 74.1
TAR376G0684 Trochodendron aralioides HOM05D001663 ORTHO05D005717 2.5e-198 695.7 478 72.8
CSS0006833 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 3.3e-198 695.3 480 75.0
Thecc.08G114700 Theobroma cacao HOM05D001663 ORTHO05D005717 7.4e-198 694.1 479 75.2
vmacro04774 Vaccinium macrocarpon HOM05D001663 ORTHO05D005717 7.4e-198 694.1 515 70.1
MD15G1361100 Malus domestica HOM05D001663 ORTHO05D005717 8.1e-197 690.6 478 75.7
Gorai.005G092500 Gossypium raimondii HOM05D001663 ORTHO05D005717 2.0e-195 686.0 479 73.7
QL12p035556 Quercus lobata HOM05D001663 ORTHO05D005717 5.8e-195 684.5 477 73.6
Hma1.2p1_0529F.1_g173150 Hydrangea macrophylla HOM05D001663 ORTHO05D005717 4.9e-194 681.4 478 73.0
Sabra02G0071900 Salix brachista HOM05D001663 ORTHO05D005717 6.5e-194 681.0 495 70.7
Gohir.D05G269900 Gossypium hirsutum HOM05D001663 ORTHO05D005717 1.1e-193 680.2 479 72.9
Nn1g05239 Nelumbo nucifera HOM05D001663 ORTHO05D005717 1.1e-193 680.2 479 73.1
CiPaw.05G231300 Carya illinoinensis HOM05D001663 ORTHO05D005717 1.9e-193 679.5 479 73.7
Duzib093G0504 Durio zibethinus HOM05D001663 ORTHO05D005717 3.2e-193 678.7 479 73.3
Gorai.009G282600 Gossypium raimondii HOM05D001663 ORTHO05D005717 3.2e-193 678.7 479 72.7
Eucgr.H00930 Eucalyptus grandis HOM05D001663 ORTHO05D005717 4.2e-193 678.3 479 72.4
TWI12G1423 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 1.2e-192 676.8 479 72.4
Gohir.A02G075400 Gossypium hirsutum HOM05D001663 ORTHO05D005717 2.7e-192 675.6 479 72.2
MD08G1174500 Malus domestica HOM05D001663 ORTHO05D005717 3.5e-192 675.2 479 73.3
Nitab4.5_0001915g0140 Nicotiana tabacum HOM05D001663 ORTHO05D005717 6.0e-192 674.5 479 72.0
Nitab4.5_0004952g0050 Nicotiana tabacum HOM05D001663 ORTHO05D005717 7.9e-192 674.1 477 72.3
Potri.002G090900 Populus trichocarpa HOM05D001663 ORTHO05D005717 7.9e-192 674.1 478 72.2
HanXRQChr05g0162261 Helianthus annuus HOM05D001663 ORTHO05D005717 8.7e-191 670.6 479 72.0
Solyc04g072440.4 Solanum lycopersicum HOM05D001663 ORTHO05D005717 8.7e-191 670.6 485 70.7
PGSC0003DMG400027563 Solanum tuberosum HOM05D001663 ORTHO05D005717 8.7e-191 670.6 485 70.5
Sopen04g028600 Solanum pennellii HOM05D001663 ORTHO05D005717 1.9e-190 669.5 485 70.5
Cpa.g.sc1782.1 Carica papaya HOM05D001663 ORTHO05D005717 2.5e-190 669.1 479 71.8
TWI56G1202 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 1.1e-188 663.7 479 70.1
PSO210G6007 Papaver somniferum HOM05D001663 ORTHO05D005717 5.3e-188 661.4 479 70.6
THA.LOC104813136 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 5.3e-188 661.4 477 71.3
CANSAT25G1457 Cannabis sativa HOM05D001663 ORTHO05D005717 1.2e-187 660.2 478 70.5
Migut.C00211 Erythranthe guttata HOM05D001663 ORTHO05D005717 1.2e-187 660.2 478 70.5
Thhalv10028627m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 1.5e-187 659.8 477 70.2
CAN.G617.5 Capsicum annuum HOM05D001663 ORTHO05D005717 3.4e-187 658.7 485 69.5
DCAR_003554 Daucus carota HOM05D001663 ORTHO05D005717 3.4e-187 658.7 468 70.9
PSO447G0047 Papaver somniferum HOM05D001663 ORTHO05D005717 5.9e-187 657.9 479 70.1
Aa31LG9G14450 Aethionema arabicum HOM05D001663 ORTHO05D005717 1.0e-186 657.1 478 70.7
Cc10_g06030 Coffea canephora HOM05D001663 ORTHO05D005717 1.7e-186 656.4 480 68.1
Gohir.D02G082500 Gossypium hirsutum HOM05D001663 ORTHO05D005717 2.2e-186 656.0 479 71.4
Aqoxy3G00244 Aquilegia oxysepala HOM05D001663 ORTHO05D005717 3.8e-186 655.2 510 66.5
Sp6g09330 Schrenkiella parvula HOM05D001663 ORTHO05D005717 6.5e-186 654.4 477 69.6
ECA246G3782 Erigeron canadensis HOM05D001663 ORTHO05D005717 8.5e-186 654.1 477 71.3
THA.LOC104816946 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 3.6e-184 648.7 481 69.6
PGR042G1550 Punica granatum HOM05D001663 ORTHO05D005717 7.9e-184 647.5 474 70.9
Haze_00550 Corylus avellana HOM05D001663 ORTHO05D005717 3.0e-183 645.6 479 72.2
Psat2g076640 Pisum sativum HOM05D001663 ORTHO05D005717 5.1e-183 644.8 439 77.7
RcHm_v2.0_Chr7g0240361 Rosa chinensis HOM05D001663 ORTHO05D005717 8.7e-183 644.0 420 78.3
BcaC04g20910 Brassica carinata HOM05D001663 ORTHO05D005717 1.6e-181 639.8 477 67.9
C09p38040 Brassica napus HOM05D001663 ORTHO05D005717 1.6e-181 639.8 477 67.9
BolC9t56640H Brassica oleracea HOM05D001663 ORTHO05D005717 1.6e-181 639.8 477 67.9
MSTRG.24955 Avicennia marina HOM05D001663 ORTHO05D005717 2.8e-181 639.0 478 69.0
AT4G08540 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 3.7e-181 638.6 476 68.3
A09p30170 Brassica napus HOM05D001663 ORTHO05D005717 3.7e-181 638.6 477 67.5
CARHR259570 Cardamine hirsuta HOM05D001663 ORTHO05D005717 4.8e-181 638.3 477 67.5
BcaB01g01352 Brassica carinata HOM05D001663 ORTHO05D005717 5.3e-180 634.8 477 67.7
Carub.0006s2708 Capsella rubella HOM05D001663 ORTHO05D005717 2.9e-178 629.0 476 67.9
EL10Ac8g18308 Beta vulgaris HOM05D001663 ORTHO05D005717 1.1e-177 627.1 474 66.5
Ah.09g230050 Amaranthus hybridus HOM05D001663 ORTHO05D005717 2.5e-177 625.9 477 66.9
SalBow7G1241 Salvia bowleyana HOM05D001663 ORTHO05D005717 6.7e-175 617.8 534 61.4
Cfa015941 Carpinus fangiana HOM05D001663 ORTHO05D005717 5.3e-172 608.2 472 70.6
Lsat_1_v5_gn_6_102021 Lactuca sativa HOM05D001663 ORTHO05D005717 8.5e-170 600.9 486 64.8
MSTRG.947 Avicennia marina HOM05D001663 ORTHO05D005717 1.9e-169 599.7 476 66.0
MELO3C008130.2 Cucumis melo HOM05D001663 ORTHO05D005717 1.6e-168 596.7 477 65.6
SGA_v2.0_scaffold48G18009 Striga asiatica HOM05D001663 ORTHO05D005717 3.0e-167 592.4 477 65.4
CsaV3_2G033570 Cucumis sativus L. HOM05D001663 ORTHO05D005717 7.4e-166 587.8 478 64.6
Peaxi162Scf00756g00434 Petunia axillaris HOM05D001663 ORTHO05D005717 1.7e-165 586.6 469 65.7
CSS0003227 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 2.4e-164 582.8 376 79.5
AL6G42350 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 1.3e-162 577.0 476 63.9
Actinidia29571 Actinidia chinensis HOM05D001663 ORTHO05D005717 1.7e-162 576.6 442 69.9
Lj6A263G20 Lonicera japonica HOM05D001663 ORTHO05D005717 1.7e-162 576.6 479 64.3
AUR62033240 Chenopodium quinoa HOM05D001663 ORTHO05D005717 5.0e-162 575.1 423 68.3
ClCG11G008030 Citrullus lanatus HOM05D001663 ORTHO05D005717 1.9e-161 573.2 496 62.5
FAN13G3230 Fragaria x ananassa HOM05D001663 ORTHO05D005717 2.1e-160 569.7 477 65.0
Sed0003415 Sechium edule HOM05D001663 ORTHO05D005717 2.1e-160 569.7 473 63.4
Atru.chr13.1295 Acer truncatum HOM05D001663 ORTHO05D005717 3.0e-159 565.8 375 78.1
BraA09t38581Z Brassica rapa HOM05D001663 ORTHO05D005717 1.4e-156 557.0 577 53.9
Sc18g0007560 Simmondsia chinensis HOM05D001663 ORTHO05D005717 3.4e-150 535.8 376 70.2
Hund26324 Selenicereus undatus HOM05D001663 ORTHO05D005717 4.8e-149 531.9 383 69.7
Dinv13062 Davidia involucrata HOM05D001663 ORTHO05D005717 4.5e-147 525.4 338 78.7
ATR0564G349 Amborella trichopoda HOM05D001663 ORTHO05D005717 4.7e-144 515.4 483 56.7
arahy.Tifrunner.gnm1.ann1.8X036G Arachis hypogaea HOM05D001663 ORTHO05D005717 1.1e-132 477.6 244 97.5
AUR62021323 Chenopodium quinoa HOM05D001663 ORTHO05D005717 1.1e-132 477.6 477 54.7
Gohir.A05G268300 Gossypium hirsutum HOM05D001663 ORTHO05D005717 4.3e-129 465.7 311 75.6
arahy.Tifrunner.gnm1.ann1.ZLN6KV Arachis hypogaea HOM05D001663 ORTHO05D005717 7.5e-126 454.9 240 96.7
HPP92_009232 Vanilla planifolia HOM05D001663 ORTHO05D005717 3.9e-122 442.6 376 58.5
MBI02_g34272_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 5.0e-122 442.2 310 71.9
Oeu035400.3 Olea europaea HOM05D001663 ORTHO05D005717 1.8e-119 433.7 809 36.8
CDE05G2350 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 2.3e-119 433.3 345 63.8
Carub.0002s2479 Capsella rubella HOM05D001663 ORTHO05D005717 3.0e-114 416.4 450 51.8
unitig_747.g21547 Utricularia gibba HOM05D001663 ORTHO05D005717 2.8e-112 409.8 477 49.5
AL2G38170 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 3.6e-112 409.5 457 50.1
CARHR071380 Cardamine hirsuta HOM05D001663 ORTHO05D005717 1.5e-110 404.1 452 48.9
AT1G77890 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 3.4e-110 402.9 457 50.1
BolC6t40206H Brassica oleracea HOM05D001663 ORTHO05D005717 8.4e-109 398.3 446 49.8
Sp5g33060 Schrenkiella parvula HOM05D001663 ORTHO05D005717 1.9e-108 397.1 447 50.6
Aa31LG4G7980 Aethionema arabicum HOM05D001663 ORTHO05D005717 1.6e-107 394.0 473 48.4
BraA07t31838Z Brassica rapa HOM05D001663 ORTHO05D005717 1.6e-107 394.0 446 49.1
BcaB03g15913 Brassica carinata HOM05D001663 ORTHO05D005717 1.1e-103 381.3 446 48.7
VMungo0647G1200 Vigna mungo HOM05D001663 ORTHO05D005717 3.8e-101 372.9 228 84.2
Zm00001eb327970 Zea mays HOM05D001663 ORTHO05D005717 2.4e-100 370.2 438 46.1
C06p51850 Brassica napus HOM05D001663 ORTHO05D005717 1.2e-99 367.9 374 52.7
A07p43160 Brassica napus HOM05D001663 ORTHO05D005717 3.5e-99 366.3 374 52.1
Os07g0626300 Oryza sativa ssp. japonica HOM05D001663 ORTHO05D005717 7.3e-97 358.6 422 47.6
Zm00001eb109770 Zea mays HOM05D001663 ORTHO05D005717 1.3e-96 357.8 407 47.9
Pp3c5_11170 Physcomitrium patens HOM05D001663 ORTHO05D005717 2.2e-85 320.5 495 41.4
Thhalv10018451m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 3.0e-82 310.1 453 43.9
Actinidia33165 Actinidia chinensis HOM05D001663 ORTHO05D005717 4.8e-80 302.8 250 64.8
Mapoly0103s0077 Marchantia polymorpha HOM05D001663 ORTHO05D005717 1.3e-69 268.1 489 36.2
SEGI_08259 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 7.0e-55 219.2 322 41.6
MBI02_g34271_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 1.9e-52 211.1 191 60.7
SEGI_31098 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 2.0e-49 201.1 203 51.7
AagrBONN_evm.TU.Sc2ySwM_344.1096 Anthoceros agrestis HOM05D001663 ORTHO05D005717 3.2e-44 183.7 434 32.5
BcaC08g47627 Brassica carinata HOM05D001663 ORTHO05D005717 4.2e-44 183.3 203 48.8
CBR_g4197 Chara braunii HOM05D001663 ORTHO05D005717 2.2e-37 161.0 513 29.2
Atru.chr13.1296 Acer truncatum HOM05D001663 ORTHO05D005717 2.4e-31 141.0 102 68.6
Actinidia33166 Actinidia chinensis HOM05D001663 ORTHO05D005717 1.8e-26 124.8 106 59.4
CDE05G1781 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 2.8e-19 100.9 90 55.6
Dinv13063 Davidia involucrata HOM05D001663 ORTHO05D005717 3.0e-13 80.9 62 69.4
Zm00001eb031630 Zea mays HOM05D001663 ORTHO05D005717 1.2e-11 75.5 142 31.7
SEGI_07227 Sequoiadendron giganteum HOM05D001663 ORTHO05D015595 9.8e-09 65.9 84 39.3
Cre08.g377600 Chlamydomonas reinhardtii HOM05D001663 ORTHO05D005717 2.9e-08 64.3 358 21.5


User provided reference genes

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