Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 2.4e-142 508.8 254 100.0
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 1.0e-137 493.4 252 97.2
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 1.3e-113 413.3 249 84.3
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 7.4e-112 407.5 249 82.7
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 1.3e-108 396.7 254 77.6
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 3.2e-107 392.1 247 77.3
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 1.2e-106 390.2 255 77.3
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 7.9e-106 387.5 246 77.6
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 1.3e-105 386.7 254 76.0
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 1.3e-105 386.7 251 76.1
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 3.7e-103 378.6 252 74.2
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 1.3e-100 370.2 247 73.7
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 1.0e-92 344.0 249 70.7
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 1.1e-91 340.5 253 68.8
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 1.4e-91 340.1 250 66.4
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 1.9e-91 339.7 249 68.7
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 2.5e-91 339.3 254 67.3
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 2.5e-91 339.3 254 67.3
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 4.2e-91 338.6 250 66.0
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 9.4e-91 337.4 246 71.1
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 4.7e-90 335.1 247 68.0
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 4.7e-90 335.1 248 69.0
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 1.0e-89 334.0 244 68.0
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 1.0e-89 334.0 244 66.8
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 1.8e-89 333.2 250 66.4
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 2.3e-89 332.8 249 67.5
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 3.0e-89 332.4 255 65.5
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 3.0e-89 332.4 240 68.8
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 5.1e-89 331.6 248 68.1
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 8.8e-89 330.9 246 65.0
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 8.8e-89 330.9 254 66.1
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 1.5e-88 330.1 245 66.5
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 1.5e-88 330.1 245 66.5
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 2.6e-88 329.3 242 68.2
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 3.3e-88 328.9 222 74.8
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 7.4e-88 327.8 245 67.3
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 1.3e-87 327.0 247 68.0
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 2.8e-87 325.9 247 65.2
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 2.8e-87 325.9 249 65.5
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 2.8e-87 325.9 247 63.6
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 3.7e-87 325.5 247 67.6
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 4.8e-87 325.1 245 66.1
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 8.2e-87 324.3 242 66.9
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 1.1e-86 323.9 245 66.1
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 3.1e-86 322.4 245 65.7
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 3.1e-86 322.4 247 68.0
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 3.1e-86 322.4 246 65.4
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 9.1e-86 320.9 241 65.6
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 1.6e-85 320.1 249 65.5
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 4.5e-85 318.5 245 66.9
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 4.5e-85 318.5 250 62.8
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 5.9e-85 318.2 254 63.4
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 5.9e-85 318.2 237 66.7
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 1.3e-84 317.0 230 68.7
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 2.2e-84 316.2 254 62.2
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 1.1e-83 313.9 283 59.7
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 1.5e-83 313.5 247 62.3
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 1.5e-83 313.5 235 66.4
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 7.2e-83 311.2 252 64.3
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 9.4e-83 310.8 242 64.5
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 1.6e-82 310.1 235 66.8
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 2.1e-82 309.7 244 63.1
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 2.1e-82 309.7 244 62.7
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 2.7e-82 309.3 245 66.9
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 2.7e-82 309.3 247 64.8
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 3.6e-82 308.9 241 63.1
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 4.7e-82 308.5 243 63.4
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 1.8e-81 306.6 244 62.7
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 6.7e-81 304.7 238 62.6
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 8.8e-81 304.3 243 62.6
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 1.5e-80 303.5 243 62.6
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 2.0e-80 303.1 247 61.5
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 2.6e-80 302.8 247 61.5
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 2.6e-80 302.8 247 61.5
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 3.3e-80 302.4 243 62.1
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 7.5e-80 301.2 247 61.1
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 9.7e-80 300.8 249 60.6
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 9.7e-80 300.8 247 61.1
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 9.7e-80 300.8 247 61.1
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 9.7e-80 300.8 249 60.6
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 9.7e-80 300.8 240 60.8
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 1.7e-79 300.1 249 60.6
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 1.7e-79 300.1 243 61.3
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 2.2e-79 299.7 249 60.2
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 2.2e-79 299.7 249 60.6
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 4.8e-79 298.5 241 63.1
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 1.1e-78 297.4 252 59.5
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 1.0e-76 290.8 228 65.4
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 1.3e-76 290.4 233 62.7
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 3.8e-76 288.9 241 63.5
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 5.0e-76 288.5 235 60.0
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 5.5e-75 285.0 259 57.9
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 5.5e-75 285.0 248 57.7
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 2.6e-72 276.2 196 67.9
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 1.7e-71 273.5 244 57.0
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 3.7e-71 272.3 233 59.2
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 3.7e-71 272.3 242 57.9
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 5.4e-70 268.5 321 49.8
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 2.0e-69 266.5 234 54.3
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 1.0e-68 264.2 239 55.6
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 2.5e-67 259.6 235 54.0
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 3.2e-67 259.2 249 58.2
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 1.8e-65 253.4 185 68.6
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 1.8e-65 253.4 208 63.0
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 2.6e-64 249.6 249 57.0
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 4.4e-64 248.8 253 54.5
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 9.8e-64 247.7 250 54.8
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 1.3e-63 247.3 196 61.7
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 2.2e-63 246.5 228 52.2
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 1.1e-62 244.2 249 56.2
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 1.6e-61 240.4 237 50.6
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 4.3e-59 232.3 254 50.0
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 1.6e-58 230.3 139 78.4
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 2.7e-53 213.0 162 63.6
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 2.7e-53 213.0 237 44.7
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 6.6e-52 208.4 187 58.3
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 3.3e-51 206.1 213 49.8
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 6.8e-49 198.4 137 70.1
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 1.4e-46 190.7 157 57.3
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 1.6e-45 187.2 137 67.9
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 3.7e-39 166.0 131 64.9
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 6.8e-33 145.2 231 35.5
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.1e-27 127.9 85 75.3
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 1.2e-26 124.4 205 34.1
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 2.8e-26 123.2 84 72.6
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 5.1e-20 102.4 79 60.8
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 5.1e-20 102.4 79 60.8
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 1.1e-19 101.3 82 59.8
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 4.0e-17 92.8 63 73.0
A10p11050 Brassica napus HOM05D002209 ORTHO05D033214 6.0e-13 79.0 80 53.8
BolC6t38528H Brassica oleracea HOM05D002209 ORTHO05D033214 2.4e-06 57.0 46 60.9
BraA10t43197Z Brassica rapa HOM05D002209 ORTHO05D033214 7.1e-06 55.5 47 59.6


User provided reference genes

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