Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7LSJ4G Arachis hypogaea HOM05D003956 ORTHO05D004850 4.6e-112 407.9 207 100.0
arahy.Tifrunner.gnm1.ann1.I3NY02 Arachis hypogaea HOM05D003956 ORTHO05D004850 3.8e-82 308.5 218 78.4
arahy.Tifrunner.gnm1.ann1.EQKV61 Arachis hypogaea HOM05D003956 ORTHO05D004850 1.5e-75 286.6 219 72.6
arahy.Tifrunner.gnm1.ann1.YQ8C5N Arachis hypogaea HOM05D003956 ORTHO05D004850 7.7e-75 284.3 219 72.1
Glyma.17G020600 Glycine max HOM05D003956 ORTHO05D004850 1.7e-74 283.1 227 69.2
Glyma.07G253700 Glycine max HOM05D003956 ORTHO05D004850 2.9e-74 282.3 227 69.2
Lj4g0014830 Lotus japonicus HOM05D003956 ORTHO05D004850 3.8e-74 282.0 227 68.3
VMungo1215G0684 Vigna mungo HOM05D003956 ORTHO05D004850 2.5e-73 279.3 227 68.3
Thecc.04G272600 Theobroma cacao HOM05D003956 ORTHO05D004850 4.2e-73 278.5 227 67.4
Ciclev10006837m.g Citrus clementina HOM05D003956 ORTHO05D004850 4.7e-72 275.0 227 66.5
Duzib212G0153 Durio zibethinus HOM05D003956 ORTHO05D004850 6.1e-72 274.6 227 66.5
CiPaw.01G156600 Carya illinoinensis HOM05D003956 ORTHO05D004850 8.0e-72 274.2 227 67.0
Lalb_Chr13g0303991 Lupinus albus HOM05D003956 ORTHO05D004850 1.0e-71 273.9 220 68.2
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 1.8e-71 273.1 227 67.4
Gohir.D10G162900 Gossypium hirsutum HOM05D003956 ORTHO05D004850 1.8e-71 273.1 227 66.5
Gorai.011G181800 Gossypium raimondii HOM05D003956 ORTHO05D004850 1.8e-71 273.1 227 66.5
ECA240G3955 Erigeron canadensis HOM05D003956 ORTHO05D004850 2.3e-71 272.7 227 66.5
TPR.G28132 Trifolium pratense HOM05D003956 ORTHO05D004850 2.3e-71 272.7 227 67.4
SGA_v2.0_scaffold142G35643 Striga asiatica HOM05D003956 ORTHO05D004850 3.0e-71 272.3 219 67.6
Psat0ss7919g0200 Pisum sativum HOM05D003956 ORTHO05D004850 8.8e-71 270.8 227 66.1
Dinv44455 Davidia involucrata HOM05D003956 ORTHO05D004850 1.1e-70 270.4 227 65.6
Atru.chr4.2704 Acer truncatum HOM05D003956 ORTHO05D004850 2.0e-70 269.6 227 65.6
CANSAT78G1736 Cannabis sativa HOM05D003956 ORTHO05D004850 3.3e-70 268.9 227 65.2
MELO3C006585.2 Cucumis melo HOM05D003956 ORTHO05D004850 3.3e-70 268.9 227 64.8
PGR004G0287 Punica granatum HOM05D003956 ORTHO05D004850 3.3e-70 268.9 227 65.2
Duzib151G0049 Durio zibethinus HOM05D003956 ORTHO05D004850 4.4e-70 268.5 227 64.8
Prupe.1G146600 Prunus persica HOM05D003956 ORTHO05D004850 4.4e-70 268.5 227 65.6
Phvul.003G098200 Phaseolus vulgaris HOM05D003956 ORTHO05D004850 5.7e-70 268.1 227 66.5
QL06p006231 Quercus lobata HOM05D003956 ORTHO05D004850 5.7e-70 268.1 239 61.9
TAR365G1004 Trochodendron aralioides HOM05D003956 ORTHO05D004850 9.7e-70 267.3 227 63.4
CsaV3_3G013930 Cucumis sativus L. HOM05D003956 ORTHO05D004850 1.3e-69 266.9 227 64.3
arahy.Tifrunner.gnm1.ann1.HZTZ4X Arachis hypogaea HOM05D003956 ORTHO05D004850 2.2e-69 266.2 210 70.5
ClCG05G005590 Citrullus lanatus HOM05D003956 ORTHO05D004850 2.2e-69 266.2 227 64.8
Nn3g21184 Nelumbo nucifera HOM05D003956 ORTHO05D004850 2.2e-69 266.2 227 63.9
Actinidia23451 Actinidia chinensis HOM05D003956 ORTHO05D004850 2.8e-69 265.8 227 63.9
CSS0033563 Camellia sinensis var. sinensis HOM05D003956 ORTHO05D004850 2.8e-69 265.8 227 64.3
Haze_01011 Corylus avellana HOM05D003956 ORTHO05D004850 2.8e-69 265.8 222 66.2
Oeu032695.1 Olea europaea HOM05D003956 ORTHO05D004850 2.8e-69 265.8 227 63.9
Manes.03G188300 Manihot esculenta HOM05D003956 ORTHO05D004850 4.8e-69 265.0 227 64.3
GSVIVG01017850001 Vitis vinifera HOM05D003956 ORTHO05D004850 6.3e-69 264.6 227 64.8
MD16G1179500 Malus domestica HOM05D003956 ORTHO05D004850 8.2e-69 264.2 222 65.3
Sed0002405 Sechium edule HOM05D003956 ORTHO05D004850 8.2e-69 264.2 227 63.9
Sc25g0004550 Simmondsia chinensis HOM05D003956 ORTHO05D004850 8.2e-69 264.2 227 63.0
Cfa015539 Carpinus fangiana HOM05D003956 ORTHO05D004850 1.8e-68 263.1 227 64.3
MD16G1179400 Malus domestica HOM05D003956 ORTHO05D004850 2.4e-68 262.7 215 65.6
Lj3C806G12 Lonicera japonica HOM05D003956 ORTHO05D004850 3.1e-68 262.3 229 63.8
Hma1.2p1_0511F.1_g169230 Hydrangea macrophylla HOM05D003956 ORTHO05D004850 5.3e-68 261.5 219 67.1
Rhsim04G0213100 Rhododendron simsii HOM05D003956 ORTHO05D004850 5.3e-68 261.5 227 63.9
Nn4g26122 Nelumbo nucifera HOM05D003956 ORTHO05D004850 7.0e-68 261.2 227 61.7
Peaxi162Scf00095g00414 Petunia axillaris HOM05D003956 ORTHO05D004850 7.0e-68 261.2 227 63.0
MD16G1179300 Malus domestica HOM05D003956 ORTHO05D004850 1.2e-67 260.4 215 65.6
Medtr4g118355 Medicago truncatula HOM05D003956 ORTHO05D004850 1.2e-67 260.4 227 65.2
Hund20662 Selenicereus undatus HOM05D003956 ORTHO05D004850 1.2e-67 260.4 219 64.8
Actinidia40209 Actinidia chinensis HOM05D003956 ORTHO05D004850 1.6e-67 260.0 227 63.0
Aqoxy2G03183 Aquilegia oxysepala HOM05D003956 ORTHO05D004850 2.0e-67 259.6 227 62.1
QL06p005921 Quercus lobata HOM05D003956 ORTHO05D004850 2.0e-67 259.6 227 63.4
CSS0013368 Camellia sinensis var. sinensis HOM05D003956 ORTHO05D004850 2.6e-67 259.2 227 63.0
Potri.010G027800 Populus trichocarpa HOM05D003956 ORTHO05D004850 2.6e-67 259.2 227 63.4
Sp7g13780 Schrenkiella parvula HOM05D003956 ORTHO05D004850 2.6e-67 259.2 227 63.4
THA.LOC104820228 Tarenaya hassleriana HOM05D003956 ORTHO05D004850 2.6e-67 259.2 227 63.0
Aa31LG9G1910 Aethionema arabicum HOM05D003956 ORTHO05D004850 3.5e-67 258.8 227 64.3
Nitab4.5_0010477g0010 Nicotiana tabacum HOM05D003956 ORTHO05D004850 4.5e-67 258.5 227 63.0
PGR031G3666 Punica granatum HOM05D003956 ORTHO05D004850 4.5e-67 258.5 227 63.4
TWI09G0935 Tripterygium wilfordii HOM05D003956 ORTHO05D004850 4.5e-67 258.5 227 62.1
Lsat_1_v5_gn_5_51481 Lactuca sativa HOM05D003956 ORTHO05D004850 5.9e-67 258.1 222 64.0
MD13G1177400 Malus domestica HOM05D003956 ORTHO05D004850 5.9e-67 258.1 215 64.7
ATR0626G228 Amborella trichopoda HOM05D003956 ORTHO05D004850 1.0e-66 257.3 227 61.7
MD13G1177500 Malus domestica HOM05D003956 ORTHO05D004850 1.0e-66 257.3 256 57.4
Thhalv10024330m.g Eutrema salsugineum HOM05D003956 ORTHO05D004850 1.3e-66 256.9 227 63.0
Nitab4.5_0000059g0230 Nicotiana tabacum HOM05D003956 ORTHO05D004850 1.3e-66 256.9 227 63.0
Solyc01g080460.3 Solanum lycopersicum HOM05D003956 ORTHO05D004850 1.7e-66 256.5 227 62.6
Sopen01g032260 Solanum pennellii HOM05D003956 ORTHO05D004850 1.7e-66 256.5 227 62.6
Cpa.g.sc16.74 Carica papaya HOM05D003956 ORTHO05D004850 2.2e-66 256.1 220 64.5
Actinidia32373 Actinidia chinensis HOM05D003956 ORTHO05D004850 2.9e-66 255.8 222 63.5
CAN.G889.10 Capsicum annuum HOM05D003956 ORTHO05D004850 2.9e-66 255.8 227 62.1
AUR62035456 Chenopodium quinoa HOM05D003956 ORTHO05D004850 2.9e-66 255.8 223 65.9
Migut.G00280 Erythranthe guttata HOM05D003956 ORTHO05D004850 2.9e-66 255.8 227 61.7
Migut.G00282 Erythranthe guttata HOM05D003956 ORTHO05D004850 2.9e-66 255.8 227 61.7
PGSC0003DMG400032107 Solanum tuberosum HOM05D003956 ORTHO05D004850 3.8e-66 255.4 227 62.6
Duzib151G0209 Durio zibethinus HOM05D003956 ORTHO05D004850 5.0e-66 255.0 227 62.1
RcHm_v2.0_Chr4g0420131 Rosa chinensis HOM05D003956 ORTHO05D004850 5.0e-66 255.0 227 61.7
AL7G39990 Arabidopsis lyrata HOM05D003956 ORTHO05D004850 6.5e-66 254.6 227 61.7
arahy.Tifrunner.gnm1.ann1.9WT78J Arachis hypogaea HOM05D003956 ORTHO05D004850 6.5e-66 254.6 194 73.7
Eucgr.H03642 Eucalyptus grandis HOM05D003956 ORTHO05D004850 8.5e-66 254.2 227 60.4
Sabra10G0012900 Salix brachista HOM05D003956 ORTHO05D004850 8.5e-66 254.2 219 63.9
AT4G15530 Arabidopsis thaliana HOM05D003956 ORTHO05D004850 1.1e-65 253.8 227 61.7
Carub.0007s2635 Capsella rubella HOM05D003956 ORTHO05D004850 1.5e-65 253.4 227 62.1
SalBow2G1708 Salvia bowleyana HOM05D003956 ORTHO05D004850 2.5e-65 252.7 219 63.0
Cc03_g02730 Coffea canephora HOM05D003956 ORTHO05D004850 3.2e-65 252.3 231 61.5
FAN17G1489 Fragaria x ananassa HOM05D003956 ORTHO05D004850 3.2e-65 252.3 227 60.4
FAN22G1243 Fragaria x ananassa HOM05D003956 ORTHO05D004850 3.2e-65 252.3 227 60.4
Psat4g028880 Pisum sativum HOM05D003956 ORTHO05D004850 3.2e-65 252.3 227 60.4
vmacro15287 Vaccinium macrocarpon HOM05D003956 ORTHO05D004850 3.2e-65 252.3 219 63.5
CARHR222330 Cardamine hirsuta HOM05D003956 ORTHO05D004850 4.2e-65 251.9 227 60.8
FvH4_4g16670 Fragaria vesca HOM05D003956 ORTHO05D004850 4.2e-65 251.9 227 60.4
FAN07G1911 Fragaria x ananassa HOM05D003956 ORTHO05D004850 4.2e-65 251.9 227 60.4
FAN12G0499 Fragaria x ananassa HOM05D003956 ORTHO05D004850 4.2e-65 251.9 227 60.4
FAN12G2270 Fragaria x ananassa HOM05D003956 ORTHO05D004850 4.2e-65 251.9 227 60.4
Thecc.04G272800 Theobroma cacao HOM05D003956 ORTHO05D004850 5.5e-65 251.5 227 61.2
vmacro08238 Vaccinium macrocarpon HOM05D003956 ORTHO05D004850 7.2e-65 251.1 245 58.4
arahy.Tifrunner.gnm1.ann1.989M5Y Arachis hypogaea HOM05D003956 ORTHO05D004850 1.2e-64 250.4 212 68.4
Eucgr.B01186 Eucalyptus grandis HOM05D003956 ORTHO05D004850 1.2e-64 250.4 227 61.7
Hund19586 Selenicereus undatus HOM05D003956 ORTHO05D004850 8.0e-64 247.7 227 60.4
Rhsim02G0016700 Rhododendron simsii HOM05D003956 ORTHO05D004850 1.0e-63 247.3 219 62.6
unitig_26.g8936 Utricularia gibba HOM05D003956 ORTHO05D004850 1.0e-63 247.3 227 58.1
MSTRG.10031 Avicennia marina HOM05D003956 ORTHO05D004850 1.4e-63 246.9 227 60.4
CDE08G0632 Ceratophyllum demersum HOM05D003956 ORTHO05D004850 1.8e-63 246.5 227 60.4
unitig_749.g14056 Utricularia gibba HOM05D003956 ORTHO05D004850 2.3e-63 246.1 227 57.7
MSTRG.10030 Avicennia marina HOM05D003956 ORTHO05D004850 3.0e-63 245.7 227 60.8
BcaC09g50248 Brassica carinata HOM05D003956 ORTHO05D004850 3.0e-63 245.7 227 59.9
BolC1t02682H Brassica oleracea HOM05D003956 ORTHO05D004850 3.0e-63 245.7 227 59.9
BcaC06g32940 Brassica carinata HOM05D003956 ORTHO05D004850 4.0e-63 245.4 227 60.4
BcaNung00266 Brassica carinata HOM05D003956 ORTHO05D004850 4.0e-63 245.4 227 59.9
BcaC06g33414 Brassica carinata HOM05D003956 ORTHO05D004850 5.2e-63 245.0 227 60.4
A03p49170 Brassica napus HOM05D003956 ORTHO05D004850 5.2e-63 245.0 227 60.4
C01p27430 Brassica napus HOM05D003956 ORTHO05D004850 5.2e-63 245.0 227 59.9
BraA03t14011Z Brassica rapa HOM05D003956 ORTHO05D004850 5.2e-63 245.0 227 60.4
A01p22040 Brassica napus HOM05D003956 ORTHO05D004850 6.7e-63 244.6 227 59.5
BraA01t02110Z Brassica rapa HOM05D003956 ORTHO05D004850 6.7e-63 244.6 227 59.5
C07p47210 Brassica napus HOM05D003956 ORTHO05D004850 1.2e-62 243.8 227 59.9
BolC7t45243H Brassica oleracea HOM05D003956 ORTHO05D004850 1.2e-62 243.8 227 59.9
SMO351G0542 Selaginella moellendorffii HOM05D003956 ORTHO05D004850 1.2e-62 243.8 227 58.1
AagrBONN_evm.TU.Sc2ySwM_228.3276 Anthoceros agrestis HOM05D003956 ORTHO05D004850 9.7e-62 240.7 227 58.6
Os05g0405000 Oryza sativa ssp. japonica HOM05D003956 ORTHO05D004850 9.7e-62 240.7 227 58.1
Zm00001eb349810 Zea mays HOM05D003956 ORTHO05D004850 9.7e-62 240.7 227 58.6
Zm00001eb287770 Zea mays HOM05D003956 ORTHO05D004850 3.7e-61 238.8 227 57.7
CSS0018237 Camellia sinensis var. sinensis HOM05D003956 ORTHO05D004850 6.3e-61 238.0 232 59.9
PSO170G3340 Papaver somniferum HOM05D003956 ORTHO05D004850 2.4e-60 236.1 220 57.7
CDE02G0811 Ceratophyllum demersum HOM05D003956 ORTHO05D004850 4.1e-60 235.3 244 55.7
Mapoly0009s0124 Marchantia polymorpha HOM05D003956 ORTHO05D004850 9.1e-60 234.2 227 57.3
PSO302G0065 Papaver somniferum HOM05D003956 ORTHO05D004850 9.1e-60 234.2 220 57.3
SGA_v2.0_scaffold86G26866 Striga asiatica HOM05D003956 ORTHO05D004850 1.6e-59 233.4 207 63.3
Pp3c5_22540 Physcomitrium patens HOM05D003956 ORTHO05D004850 1.3e-58 230.3 227 55.5
BcaC09g50243 Brassica carinata HOM05D003956 ORTHO05D004850 4.2e-57 225.3 233 55.8
DCAR_023283 Daucus carota HOM05D003956 ORTHO05D004850 9.4e-57 224.2 215 60.9
arahy.Tifrunner.gnm1.ann1.DC6B04 Arachis hypogaea HOM05D003956 ORTHO05D004850 4.0e-55 218.8 213 62.0
AUR62034949 Chenopodium quinoa HOM05D003956 ORTHO05D004850 6.3e-53 211.5 215 60.0
SGA_v2.0_scaffold86G26865 Striga asiatica HOM05D003956 ORTHO05D004850 1.4e-52 210.3 179 65.4
EL10Ac1g01820 Beta vulgaris HOM05D003956 ORTHO05D004850 2.4e-52 209.5 185 64.9
MCO12G211 Micromonas commoda HOM05D003956 ORTHO05D004850 5.0e-50 201.8 220 51.8
Cre17.g734548 Chlamydomonas reinhardtii HOM05D003956 ORTHO05D004850 5.5e-49 198.4 221 52.5
Ah.11g043140 Amaranthus hybridus HOM05D003956 ORTHO05D004850 4.1e-44 182.2 222 50.9
Gohir.A10G105700 Gossypium hirsutum HOM05D003956 ORTHO05D004850 1.2e-43 180.6 134 71.6
Cre10.g424750 Chlamydomonas reinhardtii HOM05D003956 ORTHO05D004850 2.4e-36 156.4 210 45.7
MCO01G687 Micromonas commoda HOM05D003956 ORTHO05D004850 4.3e-33 145.6 223 40.8
CBR_g50184 Chara braunii HOM05D003956 ORTHO05D004850 2.3e-26 123.2 152 48.7
TPR.G28133 Trifolium pratense HOM05D003956 ORTHO05D004850 6.6e-26 121.7 117 61.5
arahy.Tifrunner.gnm1.ann1.G5444S Arachis hypogaea HOM05D003956 ORTHO05D004850 2.5e-25 119.8 90 73.3
AUR62034328 Chenopodium quinoa HOM05D003956 ORTHO05D004850 1.2e-22 110.9 105 60.0
Hma1.2p1_2025F.1_g311530 Hydrangea macrophylla HOM05D003956 ORTHO05D004850 2.0e-22 110.2 187 46.0
Lsat_1_v5_gn_2_81921 Lactuca sativa HOM05D005278 ORTHO05D006500 5.1e-18 95.5 90 56.7
arahy.Tifrunner.gnm1.ann1.S9XVUY Arachis hypogaea HOM05D003956 ORTHO05D004850 4.4e-14 82.4 70 67.1
arahy.Tifrunner.gnm1.ann1.57CL3B Arachis hypogaea HOM05D003956 ORTHO05D004850 1.6e-08 63.9 40 77.5
arahy.Tifrunner.gnm1.ann1.V4Y3U4 Arachis hypogaea HOM05D003956 ORTHO05D004850 2.1e-08 63.5 43 72.1
SGA_v2.0_scaffold86G26869 Striga asiatica HOM05D000924 ORTHO05D001209 9.9e-06 54.7 122 35.2


User provided reference genes

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