Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 2.2e-199 698.7 346 100.0
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 2.7e-197 691.8 346 98.8
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 3.4e-176 621.7 357 88.2
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 1.3e-175 619.8 354 88.1
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 3.8e-175 618.2 357 87.7
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 3.8e-175 618.2 354 87.9
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 1.9e-171 605.9 348 86.2
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 2.8e-170 602.1 342 87.7
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 2.4e-166 589.0 339 85.8
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 5.4e-166 587.8 345 84.3
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 4.6e-165 584.7 349 84.8
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 1.3e-164 583.2 343 84.3
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 3.9e-164 581.6 345 84.3
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 1.9e-163 579.3 345 83.2
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 2.5e-163 578.9 350 81.7
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 9.6e-163 577.0 345 83.5
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 2.1e-162 575.9 361 79.5
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 4.8e-162 574.7 361 79.2
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 4.8e-162 574.7 343 83.4
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 8.1e-162 573.9 354 81.9
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 8.1e-162 573.9 362 78.5
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 1.1e-161 573.5 336 86.3
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 1.4e-161 573.2 359 81.3
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.4e-161 573.2 351 82.3
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 2.4e-161 572.4 344 82.3
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 3.1e-161 572.0 351 81.8
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 4.0e-161 571.6 337 84.0
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 9.0e-161 570.5 335 85.1
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 9.0e-161 570.5 343 84.0
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 1.2e-160 570.1 372 78.0
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 2.0e-160 569.3 362 79.6
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 2.6e-160 568.9 362 79.6
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.6e-160 568.9 343 84.0
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 3.4e-160 568.5 351 80.6
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 3.4e-160 568.5 364 79.1
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 4.5e-160 568.2 360 79.2
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 7.6e-160 567.4 358 79.9
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 6.4e-159 564.3 356 82.0
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 1.1e-158 563.5 358 79.1
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 1.9e-158 562.8 351 80.3
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 2.4e-158 562.4 335 82.1
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 3.2e-158 562.0 365 79.7
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 7.1e-158 560.8 341 80.9
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 1.2e-157 560.1 363 78.5
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 1.6e-157 559.7 352 80.7
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 2.1e-157 559.3 316 86.1
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 2.7e-157 558.9 352 79.3
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 2.7e-157 558.9 307 87.6
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 3.5e-157 558.5 358 79.1
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 3.5e-157 558.5 352 79.5
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 4.6e-157 558.1 364 77.7
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 4.6e-157 558.1 365 78.1
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 4.6e-157 558.1 364 77.7
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 4.6e-157 558.1 352 78.7
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 4.6e-157 558.1 344 79.9
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 4.6e-157 558.1 344 80.2
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 4.6e-157 558.1 347 81.8
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 1.0e-156 557.0 353 79.3
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.3e-156 556.6 362 77.6
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 1.8e-156 556.2 353 79.0
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 1.8e-156 556.2 348 79.6
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.3e-156 555.8 347 81.3
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 2.3e-156 555.8 347 79.8
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 2.3e-156 555.8 363 78.2
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 2.3e-156 555.8 352 79.3
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 3.0e-156 555.4 361 76.2
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 3.9e-156 555.1 365 77.8
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 3.9e-156 555.1 365 77.8
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.9e-156 555.1 356 78.7
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 3.9e-156 555.1 347 81.0
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 5.1e-156 554.7 351 78.3
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 6.7e-156 554.3 337 80.4
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 6.7e-156 554.3 362 77.3
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 6.7e-156 554.3 362 77.3
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 8.7e-156 553.9 353 78.5
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 8.7e-156 553.9 303 87.8
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.1e-155 553.5 331 81.9
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.5e-155 552.4 347 81.0
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 2.5e-155 552.4 330 81.5
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 3.3e-155 552.0 351 76.9
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 4.3e-155 551.6 347 78.4
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 5.6e-155 551.2 373 75.1
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 7.4e-155 550.8 362 77.3
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 7.4e-155 550.8 356 78.1
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 9.6e-155 550.4 352 78.7
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.3e-154 550.1 356 78.4
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.3e-154 550.1 353 77.6
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 1.3e-154 550.1 353 78.5
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 1.6e-154 549.7 353 77.9
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 2.1e-154 549.3 347 79.5
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 2.1e-154 549.3 353 77.6
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 2.8e-154 548.9 357 77.3
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 3.7e-154 548.5 356 78.4
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 3.7e-154 548.5 356 78.4
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.7e-154 548.5 353 77.1
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 8.1e-154 547.4 319 84.3
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 1.1e-153 547.0 363 76.3
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 2.4e-153 545.8 341 80.1
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 4.0e-153 545.0 349 79.1
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 4.0e-153 545.0 365 75.9
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 5.3e-153 544.7 371 76.5
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 6.9e-153 544.3 303 85.8
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 9.0e-153 543.9 354 77.7
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 1.2e-152 543.5 353 76.8
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 3.4e-152 542.0 347 76.4
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 4.5e-152 541.6 300 86.0
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 4.5e-152 541.6 340 79.1
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 4.5e-152 541.6 375 73.6
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 1.7e-151 539.7 309 87.4
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 3.8e-151 538.5 321 81.0
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 4.2e-150 535.0 362 74.6
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 7.1e-150 534.3 303 84.2
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 7.1e-150 534.3 354 76.0
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 2.1e-149 532.7 332 79.5
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 3.5e-149 531.9 451 63.2
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.8e-148 529.6 344 76.5
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 5.1e-148 528.1 322 81.1
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 6.7e-148 527.7 351 75.5
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 2.1e-146 522.7 343 75.8
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 6.2e-146 521.2 300 82.3
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 1.3e-143 513.5 355 71.8
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 2.9e-143 512.3 357 72.8
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 3.2e-142 508.8 355 73.5
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.3e-137 491.5 303 82.5
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 6.9e-137 491.1 305 79.0
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 8.5e-135 484.2 384 65.6
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 7.2e-134 481.1 360 69.2
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 7.2e-134 481.1 271 84.1
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 7.9e-133 477.6 343 73.2
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 5.1e-132 474.9 344 72.7
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 8.8e-132 474.2 357 68.6
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 1.1e-131 473.8 309 78.6
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 8.2e-130 467.6 309 71.5
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 1.4e-129 466.8 270 82.6
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 5.9e-128 461.5 338 65.4
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 5.0e-127 458.4 295 78.0
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 5.5e-126 454.9 360 68.6
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 6.1e-125 451.4 358 62.6
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 3.9e-124 448.7 251 86.1
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 1.5e-123 446.8 309 67.6
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 9.7e-123 444.1 336 63.1
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 5.3e-121 438.3 401 60.3
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 3.2e-118 429.1 348 64.1
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 4.2e-118 428.7 325 63.7
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 3.7e-114 415.6 310 64.5
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 1.4e-113 413.7 342 61.1
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 5.3e-113 411.8 221 91.0
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 7.5e-107 391.3 349 61.6
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.0e-100 370.9 227 80.6
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 3.3e-94 349.4 299 58.2
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 5.4e-89 332.0 247 65.2
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 1.5e-83 313.9 241 70.1
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 4.4e-67 259.2 150 82.7
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 7.8e-64 248.4 319 49.2
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 5.2e-60 235.7 170 64.7
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 3.3e-54 216.5 170 68.8
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 7.3e-46 188.7 164 60.4
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 2.5e-33 147.1 95 76.8
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 3.3e-30 136.7 296 32.4
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 1.4e-28 131.3 97 69.1
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 2.2e-26 124.0 349 28.9
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 2.3e-23 114.0 65 80.0
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 1.1e-22 111.7 240 36.7
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 2.5e-22 110.5 379 27.4
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 7.4e-22 109.0 336 28.3
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 6.5e-18 95.9 67 71.6
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 6.5e-18 95.9 67 71.6
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 1.4e-17 94.7 67 71.6
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 2.1e-16 90.9 57 78.9
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 2.7e-16 90.5 59 72.9
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.4e-12 78.2 78 56.4
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 4.5e-11 73.2 78 59.0
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 2.5e-09 67.4 145 29.7
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 5.5e-09 66.2 33 90.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 4.7e-08 63.2 47 66.0
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 7.9e-08 62.4 39 76.9
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 7.9e-08 62.4 39 76.9
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 1.4e-07 61.6 39 74.4
HanXRQChr05g0141861 Helianthus annuus HOM05D000001 ORTHO05D009862 2.6e-06 57.4 50 60.0


User provided reference genes

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