Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7I1NPB Arachis hypogaea HOM05D002638 ORTHO05D002821 1.3e-58 229.6 119 100.0
arahy.Tifrunner.gnm1.ann1.DLKB6Q Arachis hypogaea HOM05D002638 ORTHO05D002821 5.6e-46 187.6 114 86.8
arahy.Tifrunner.gnm1.ann1.XUD8XD Arachis hypogaea HOM05D002638 ORTHO05D002821 5.6e-46 187.6 114 86.8
Ca_01084_v3 Cicer arietinum L. HOM05D002638 ORTHO05D002821 1.6e-24 116.3 113 52.2
Lalb_Chr22g0351011 Lupinus albus HOM05D002638 ORTHO05D002821 3.5e-24 115.2 113 52.2
Glyma.13G363500 Glycine max HOM05D002638 ORTHO05D002821 4.6e-24 114.8 114 52.6
Medtr2g103280 Medicago truncatula HOM05D002638 ORTHO05D002821 3.0e-23 112.1 111 53.2
Glyma.15G010300 Glycine max HOM05D002638 ORTHO05D002821 2.8e-21 105.5 114 49.1
TPR.G37203 Trifolium pratense HOM05D002638 ORTHO05D002821 1.2e-19 100.1 114 50.0
Phvul.005G175100 Phaseolus vulgaris HOM05D002638 ORTHO05D002821 2.6e-19 99.0 115 47.0
VMungo1080G0667 Vigna mungo HOM05D002638 ORTHO05D002821 1.9e-17 92.8 111 46.8
Lj3g0016018 Lotus japonicus HOM05D002638 ORTHO05D002821 1.2e-16 90.1 115 47.8
Phvul.005G175400 Phaseolus vulgaris HOM05D002638 ORTHO05D002821 1.6e-16 89.7 110 45.5
Prupe.3G080100 Prunus persica HOM05D002638 ORTHO05D002821 1.6e-16 89.7 114 43.9
COL.COLO4_12898 Corchorus olitorius HOM05D002638 ORTHO05D002821 2.3e-15 85.9 112 42.0
MD17G1204600 Malus domestica HOM05D002638 ORTHO05D002821 1.5e-14 83.2 115 42.6
CsaV3_7G032620 Cucumis sativus L. HOM05D002638 ORTHO05D002821 1.7e-13 79.7 111 43.2
GSVIVG01017253001 Vitis vinifera HOM05D002638 ORTHO05D002821 2.2e-13 79.3 115 41.7
Sed0001208 Sechium edule HOM05D002638 ORTHO05D002821 4.8e-13 78.2 115 40.9
MD09G1220700 Malus domestica HOM05D002638 ORTHO05D002821 1.1e-12 77.0 114 36.8
Manes.11G052800 Manihot esculenta HOM05D002638 ORTHO05D002821 1.4e-12 76.6 115 39.1
RcHm_v2.0_Chr2g0136541 Rosa chinensis HOM05D002638 ORTHO05D002821 1.8e-12 76.3 114 38.6
ClCG09G002710 Citrullus lanatus HOM05D002638 ORTHO05D002821 3.1e-12 75.5 117 38.5
CANSAT56G0443 Cannabis sativa HOM05D002638 ORTHO05D002821 5.3e-12 74.7 115 39.1
TWI75G1746 Tripterygium wilfordii HOM05D002638 ORTHO05D002821 5.3e-12 74.7 115 40.9
FvH4_6g30310 Fragaria vesca HOM05D002638 ORTHO05D002821 3.4e-11 72.0 113 36.3
QL05p027895 Quercus lobata HOM05D002638 ORTHO05D002821 1.0e-10 70.5 112 37.5
FAN14G3760 Fragaria x ananassa HOM05D002638 ORTHO05D002821 1.3e-10 70.1 113 35.4
Atru.chr1.3089 Acer truncatum HOM05D002638 ORTHO05D002821 2.9e-10 68.9 118 36.4
AL3G28350 Arabidopsis lyrata HOM05D002638 ORTHO05D002821 3.8e-10 68.6 114 39.5
CiPaw.01G244600 Carya illinoinensis HOM05D002638 ORTHO05D002821 5.0e-10 68.2 116 37.1
AT3G15690 Arabidopsis thaliana HOM05D002638 ORTHO05D002821 1.4e-09 66.6 114 38.6
CSS0049930 Camellia sinensis var. sinensis HOM05D002638 ORTHO05D002821 2.5e-09 65.9 113 37.2
Carub.0003s1544 Capsella rubella HOM05D002638 ORTHO05D002821 3.2e-09 65.5 114 37.7
FAN05G0019 Fragaria x ananassa HOM05D002638 ORTHO05D002821 3.2e-09 65.5 114 34.2
Thhalv10021338m.g Eutrema salsugineum HOM05D002638 ORTHO05D002821 4.2e-09 65.1 114 40.4
Oeu063805.1 Olea europaea HOM05D002638 ORTHO05D002821 7.2e-09 64.3 117 37.6
Thecc.06G072400 Theobroma cacao HOM05D002638 ORTHO05D002821 7.2e-09 64.3 112 33.9
Dinv30572 Davidia involucrata HOM05D002638 ORTHO05D002821 9.4e-09 63.9 115 39.1
Ciclev10026275m.g Citrus clementina HOM05D002638 ORTHO05D002821 1.2e-08 63.5 113 38.1
PSO455G0046 Papaver somniferum HOM05D002638 ORTHO05D002821 1.2e-08 63.5 118 38.1
Aa31LG8G2890 Aethionema arabicum HOM05D002638 ORTHO05D002821 1.6e-08 63.2 114 37.7
Sp3g13990 Schrenkiella parvula HOM05D002638 ORTHO05D002821 2.1e-08 62.8 114 38.6
Actinidia01767 Actinidia chinensis HOM05D002638 ORTHO05D002821 4.7e-08 61.6 118 35.6
CARHR090780 Cardamine hirsuta HOM05D002638 ORTHO05D002821 4.7e-08 61.6 114 37.7
Eucgr.J03051 Eucalyptus grandis HOM05D002638 ORTHO05D002821 4.7e-08 61.6 115 36.5
BcaC09g48550 Brassica carinata HOM05D002638 ORTHO05D002821 6.1e-08 61.2 114 37.7
PSO170G1838 Papaver somniferum HOM05D002638 ORTHO05D002821 6.1e-08 61.2 118 36.4
Actinidia15796 Actinidia chinensis HOM05D002638 ORTHO05D002821 7.9e-08 60.8 116 37.1
TAR636G2853 Trochodendron aralioides HOM05D002638 ORTHO05D002821 1.8e-07 59.7 118 35.6
THA.LOC104810498 Tarenaya hassleriana HOM05D002638 ORTHO05D002821 2.3e-07 59.3 113 34.5
FAN02G1891 Fragaria x ananassa HOM05D002638 ORTHO05D002821 3.9e-07 58.5 112 33.0
Nn2g11962 Nelumbo nucifera HOM05D002638 ORTHO05D002821 3.9e-07 58.5 118 31.4
THA.LOC104818035 Tarenaya hassleriana HOM05D002638 ORTHO05D002821 5.1e-07 58.2 120 35.8
A01p38400 Brassica napus HOM05D002638 ORTHO05D002821 1.1e-06 57.0 112 35.7
BraA01t03890Z Brassica rapa HOM05D002638 ORTHO05D002821 1.1e-06 57.0 112 35.7
Gohir.D10G075100 Gossypium hirsutum HOM05D002638 ORTHO05D002821 2.0e-06 56.2 112 33.0
PGR031G3768 Punica granatum HOM05D002638 ORTHO05D002821 2.0e-06 56.2 123 35.0
Cpa.g.sc336.10 Carica papaya HOM05D002638 ORTHO05D002821 2.6e-06 55.8 111 33.3
AT1G52670 Arabidopsis thaliana HOM05D002638 ORTHO05D002821 4.4e-06 55.1 114 33.3
FAN09G0297 Fragaria x ananassa HOM05D002638 ORTHO05D002821 4.4e-06 55.1 112 32.1
AL1G60940 Arabidopsis lyrata HOM05D002638 ORTHO05D002821 5.7e-06 54.7 118 36.4
MBI04_g24209_MAGBIO Magnolia biondii HOM05D002638 ORTHO05D002821 7.4e-06 54.3 82 40.2


User provided reference genes

Program Settings