Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7F6MXP Arachis hypogaea HOM05D001549 ORTHO05D005557 3.3e-49 198.0 94 100.0
arahy.Tifrunner.gnm1.ann1.9J2F9Q Arachis hypogaea HOM05D001549 ORTHO05D005557 1.5e-46 189.1 94 96.8
arahy.Tifrunner.gnm1.ann1.UW2LYQ Arachis hypogaea HOM05D001549 ORTHO05D005557 1.5e-46 189.1 94 96.8
Lalb_Chr21g0307441 Lupinus albus HOM05D001549 ORTHO05D005557 1.7e-42 175.6 92 90.2
Lj5g0017773 Lotus japonicus HOM05D001549 ORTHO05D005557 5.1e-42 174.1 91 90.1
Medtr1g115230 Medicago truncatula HOM05D001549 ORTHO05D005557 5.6e-41 170.6 91 86.8
Glyma.20G100400 Glycine max HOM05D001549 ORTHO05D005557 9.6e-41 169.9 91 85.7
TPR.G4142 Trifolium pratense HOM05D001549 ORTHO05D005557 3.6e-40 167.9 91 84.6
Ca_11276_v3 Cicer arietinum L. HOM05D001549 ORTHO05D005557 1.1e-39 166.4 92 82.6
Psat6g235720 Pisum sativum HOM05D001549 ORTHO05D005557 1.4e-39 166.0 88 86.4
VMungo0720G2183 Vigna mungo HOM05D001549 ORTHO05D005557 1.4e-39 166.0 87 88.5
Eucgr.G02608 Eucalyptus grandis HOM05D001549 ORTHO05D005557 5.3e-39 164.1 87 85.1
CAN.G739.7 Capsicum annuum HOM05D001549 ORTHO05D005557 6.9e-39 163.7 87 86.2
Phvul.007G012500 Phaseolus vulgaris HOM05D001549 ORTHO05D005557 9.0e-39 163.3 87 86.2
Nn4g25180 Nelumbo nucifera HOM05D001549 ORTHO05D005557 1.2e-38 162.9 92 82.6
Lalb_Chr02g0144131 Lupinus albus HOM05D001549 ORTHO05D005557 1.5e-38 162.5 92 81.5
ClCG11G012740 Citrullus lanatus HOM05D001549 ORTHO05D005557 2.6e-38 161.8 87 86.2
Peaxi162Scf00080g01316 Petunia axillaris HOM05D004929 ORTHO05D005557 2.6e-38 161.8 87 83.9
QL01p000406 Quercus lobata HOM05D001549 ORTHO05D005557 2.6e-38 161.8 87 85.1
Solyc02g050260.2 Solanum lycopersicum HOM05D001549 ORTHO05D005557 2.6e-38 161.8 87 86.2
Sopen02g008530 Solanum pennellii HOM05D001549 ORTHO05D005557 2.6e-38 161.8 87 86.2
Aqoxy5G00260 Aquilegia oxysepala HOM05D001549 ORTHO05D005557 3.4e-38 161.4 87 85.1
Peaxi162Scf00900g00011 Petunia axillaris HOM05D001549 ORTHO05D005557 3.4e-38 161.4 87 86.2
CANSAT78G2104 Cannabis sativa HOM05D001549 ORTHO05D005557 4.5e-38 161.0 86 84.9
THA.LOC104815249 Tarenaya hassleriana HOM05D001549 ORTHO05D005557 5.8e-38 160.6 87 83.9
Lj3C845T4 Lonicera japonica HOM05D001549 ORTHO05D005557 7.6e-38 160.2 91 81.3
Atru.chr11.47 Acer truncatum HOM05D001549 ORTHO05D005557 9.9e-38 159.8 87 85.1
RcHm_v2.0_Chr4g0447131 Rosa chinensis HOM05D001549 ORTHO05D005557 9.9e-38 159.8 91 82.4
FvH4_4g37301 Fragaria vesca HOM05D001549 ORTHO05D005557 1.3e-37 159.5 87 85.1
Nitab4.5_0003448g0020 Nicotiana tabacum HOM05D001549 ORTHO05D005557 1.3e-37 159.5 87 85.1
FAN17G2050 Fragaria x ananassa HOM05D001549 ORTHO05D005557 1.7e-37 159.1 87 83.9
Gohir.D04G149700 Gossypium hirsutum HOM05D001549 ORTHO05D005557 1.7e-37 159.1 87 85.1
Gorai.012G136300 Gossypium raimondii HOM05D001549 ORTHO05D005557 1.7e-37 159.1 87 85.1
Manes.11G000600 Manihot esculenta HOM05D001549 ORTHO05D005557 1.7e-37 159.1 91 80.2
Haze_17399 Corylus avellana HOM05D001549 ORTHO05D005557 2.2e-37 158.7 91 81.3
Cfa018671 Carpinus fangiana HOM05D001549 ORTHO05D005557 2.9e-37 158.3 87 85.1
Ciclev10014380m.g Citrus clementina HOM05D001549 ORTHO05D005557 2.9e-37 158.3 87 82.8
MSTRG.425 Avicennia marina HOM05D001549 ORTHO05D005557 3.8e-37 157.9 91 82.4
QL01p000364 Quercus lobata HOM05D001549 ORTHO05D005557 3.8e-37 157.9 91 79.1
Eucgr.G02611 Eucalyptus grandis HOM05D001549 ORTHO05D005557 4.9e-37 157.5 87 80.5
Cpa.g.sc221.18 Carica papaya HOM05D001549 ORTHO05D005557 6.4e-37 157.1 87 82.8
Eucgr.G02610 Eucalyptus grandis HOM05D001549 ORTHO05D005557 6.4e-37 157.1 87 81.6
Lsat_1_v5_gn_6_17661 Lactuca sativa HOM05D001549 ORTHO05D005557 6.4e-37 157.1 87 82.8
MBI03_g13442_MAGBIO Magnolia biondii HOM05D001549 ORTHO05D005557 6.4e-37 157.1 87 82.8
Ah.01g011570 Amaranthus hybridus HOM05D001549 ORTHO05D005557 8.4e-37 156.8 87 81.6
ECA233G6260 Erigeron canadensis HOM05D001549 ORTHO05D005557 8.4e-37 156.8 91 79.1
Sed0005799 Sechium edule HOM05D001549 ORTHO05D005557 8.4e-37 156.8 87 83.9
Zm00001eb271750 Zea mays HOM05D001549 ORTHO05D005557 8.4e-37 156.8 91 79.1
MELO3C011764.2 Cucumis melo HOM05D001549 ORTHO05D005557 1.1e-36 156.4 87 83.9
ECA233G5707 Erigeron canadensis HOM05D001549 ORTHO05D005557 1.1e-36 156.4 91 79.1
FAN07G2959 Fragaria x ananassa HOM05D001549 ORTHO05D005557 1.1e-36 156.4 87 83.9
QL01p000509 Quercus lobata HOM05D001549 ORTHO05D005557 1.1e-36 156.4 91 79.1
COL.COLO4_33142 Corchorus olitorius HOM05D001549 ORTHO05D005557 1.4e-36 156.0 87 81.6
TWI53G1100 Tripterygium wilfordii HOM05D001549 ORTHO05D005557 1.4e-36 156.0 87 81.6
CsaV3_5G029120 Cucumis sativus L. HOM05D001549 ORTHO05D005557 1.9e-36 155.6 87 81.6
Os06g0730600 Oryza sativa ssp. japonica HOM05D001549 ORTHO05D005557 1.9e-36 155.6 87 81.6
GSVIVG01034359001 Vitis vinifera HOM05D001549 ORTHO05D005557 1.9e-36 155.6 91 80.2
EL10Ac9g23012 Beta vulgaris HOM05D001549 ORTHO05D005557 2.4e-36 155.2 87 80.5
Gohir.A04G109500 Gossypium hirsutum HOM05D001549 ORTHO05D005557 2.4e-36 155.2 87 82.8
Atru.chr11.52 Acer truncatum HOM05D001549 ORTHO05D005557 3.2e-36 154.8 87 85.1
CiPaw.15G000800 Carya illinoinensis HOM05D001549 ORTHO05D005557 3.2e-36 154.8 87 81.6
DCAR_026873 Daucus carota HOM05D001549 ORTHO05D005557 4.2e-36 154.5 91 76.9
Migut.L00788 Erythranthe guttata HOM05D001549 ORTHO05D005557 4.2e-36 154.5 87 82.8
Atru.chr11.49 Acer truncatum HOM05D001549 ORTHO05D005557 5.4e-36 154.1 87 85.1
Migut.L00842 Erythranthe guttata HOM05D001549 ORTHO05D005557 5.4e-36 154.1 87 81.6
A06p03180 Brassica napus HOM05D001549 ORTHO05D005557 7.1e-36 153.7 87 79.3
C06p05570 Brassica napus HOM05D001549 ORTHO05D005557 7.1e-36 153.7 87 79.3
BolC6t35663H Brassica oleracea HOM05D001549 ORTHO05D005557 7.1e-36 153.7 87 79.3
BraA06t23529Z Brassica rapa HOM05D001549 ORTHO05D005557 7.1e-36 153.7 87 79.3
CDE04G0096 Ceratophyllum demersum HOM05D001549 ORTHO05D005557 7.1e-36 153.7 87 79.3
AUR62017751 Chenopodium quinoa HOM05D001549 ORTHO05D005557 9.3e-36 153.3 87 79.3
MBI03_g13444_MAGBIO Magnolia biondii HOM05D001549 ORTHO05D005557 9.3e-36 153.3 87 79.3
A08p03180 Brassica napus HOM05D001549 ORTHO05D005557 1.2e-35 152.9 90 77.8
BraA08t32351Z Brassica rapa HOM05D001549 ORTHO05D005557 1.2e-35 152.9 90 77.8
Prupe.1G351200 Prunus persica HOM05D001549 ORTHO05D005557 1.2e-35 152.9 87 81.6
MD16G1004600 Malus domestica HOM05D001549 ORTHO05D005557 1.6e-35 152.5 87 80.5
BcaB04g17256 Brassica carinata HOM05D001549 ORTHO05D005557 2.1e-35 152.1 87 79.3
Sp1g37210 Schrenkiella parvula HOM05D001549 ORTHO05D005557 2.1e-35 152.1 87 78.2
C03p89610 Brassica napus HOM05D001549 ORTHO05D005557 2.7e-35 151.8 87 79.3
BolC3t21274H Brassica oleracea HOM05D001549 ORTHO05D005557 2.7e-35 151.8 87 79.3
CARHR040400 Cardamine hirsuta HOM05D001549 ORTHO05D005557 2.7e-35 151.8 87 79.3
HanXRQChr17g0558111 Helianthus annuus HOM05D001549 ORTHO05D005557 2.7e-35 151.8 87 80.5
Potri.007G001300 Populus trichocarpa HOM05D001549 ORTHO05D005557 2.7e-35 151.8 91 79.1
Duzib132G0881 Durio zibethinus HOM05D001549 ORTHO05D005557 3.5e-35 151.4 87 80.5
Prupe.1G351000 Prunus persica HOM05D001549 ORTHO05D005557 3.5e-35 151.4 87 80.5
AT1G50380 Arabidopsis thaliana HOM05D001549 ORTHO05D005557 4.6e-35 151.0 87 78.2
Thecc.02G152600 Theobroma cacao HOM05D001549 ORTHO05D005557 4.6e-35 151.0 87 81.6
CSS0019717 Camellia sinensis var. sinensis HOM05D001549 ORTHO05D005557 6.0e-35 150.6 87 80.5
Atru.chr11.48 Acer truncatum HOM05D001549 ORTHO05D005557 7.9e-35 150.2 87 82.8
PGR142G2256 Punica granatum HOM05D001549 ORTHO05D005557 7.9e-35 150.2 87 77.0
HPP92_022058 Vanilla planifolia HOM05D001549 ORTHO05D005557 7.9e-35 150.2 89 77.5
Aa31LG10G3900 Aethionema arabicum HOM05D001549 ORTHO05D005557 1.0e-34 149.8 87 77.0
Actinidia04366 Actinidia chinensis HOM05D001549 ORTHO05D005557 1.8e-34 149.1 91 76.9
CSS0047743 Camellia sinensis var. sinensis HOM05D001549 ORTHO05D005557 1.8e-34 149.1 87 79.3
AUR62032901 Chenopodium quinoa HOM05D001549 ORTHO05D005557 1.8e-34 149.1 87 79.3
Cc11_g04170 Coffea canephora HOM05D001549 ORTHO05D005557 1.8e-34 149.1 89 77.5
Sabra07G0001000 Salix brachista HOM05D001549 ORTHO05D005557 1.8e-34 149.1 91 75.8
AL1G58024 Arabidopsis lyrata HOM05D001549 ORTHO05D005557 2.3e-34 148.7 87 77.0
Carub.0001s3946 Capsella rubella HOM05D001549 ORTHO05D005557 2.3e-34 148.7 87 77.0
Sc25g0001420 Simmondsia chinensis HOM05D001549 ORTHO05D005557 2.3e-34 148.7 87 77.0
GSVIVG01034358001 Vitis vinifera HOM05D001549 ORTHO05D005557 2.3e-34 148.7 91 75.8
Thhalv10011253m.g Eutrema salsugineum HOM05D001549 ORTHO05D005557 3.0e-34 148.3 87 75.9
ATR0124G045 Amborella trichopoda HOM05D001549 ORTHO05D005557 3.9e-34 147.9 87 77.0
Sed0013808 Sechium edule HOM05D001549 ORTHO05D005557 6.7e-34 147.1 87 77.0
SalBow2G1760 Salvia bowleyana HOM05D001549 ORTHO05D005557 8.7e-34 146.7 87 77.0
ATR0124G037 Amborella trichopoda HOM05D001549 ORTHO05D005557 1.1e-33 146.4 87 75.9
Rhsim12G0073200 Rhododendron simsii HOM05D001549 ORTHO05D005557 3.3e-33 144.8 85 78.8
Manes.04G161300 Manihot esculenta HOM05D001549 ORTHO05D005557 4.3e-33 144.4 87 73.6
Aqoxy3G00003 Aquilegia oxysepala HOM05D001549 ORTHO05D005557 7.4e-33 143.7 87 75.9
PSO170G0691 Papaver somniferum HOM05D001549 ORTHO05D005557 1.3e-32 142.9 87 75.9
vmacro16217 Vaccinium macrocarpon HOM05D001549 ORTHO05D005557 1.3e-32 142.9 87 78.2
PSO017G4045 Papaver somniferum HOM05D001549 ORTHO05D005557 2.8e-32 141.7 87 74.7
SHI21178 Sapria himalayana HOM05D001549 ORTHO05D005557 1.1e-31 139.8 87 74.7
TAR629G1676 Trochodendron aralioides HOM05D001549 ORTHO05D005557 5.8e-30 134.0 91 71.4
Pp3c6_15290 Physcomitrium patens HOM05D001549 ORTHO05D005557 8.4e-29 130.2 87 64.4
QL01p000526 Quercus lobata HOM05D001549 ORTHO05D005557 2.5e-28 128.6 67 86.6
Hund05502 Selenicereus undatus HOM05D001549 ORTHO05D005557 2.7e-27 125.2 67 80.6
AagrBONN_evm.TU.Sc2ySwM_117.1347 Anthoceros agrestis HOM05D001549 ORTHO05D005557 3.5e-27 124.8 87 63.2
Nitab4.5_0000146g0170 Nicotiana tabacum HOM05D001549 ORTHO05D005557 6.0e-27 124.0 66 84.8
Oeu027933.1 Olea europaea HOM05D001549 ORTHO05D005557 7.9e-27 123.6 67 82.1
Mapoly0011s0194 Marchantia polymorpha HOM05D001549 ORTHO05D005557 6.7e-26 120.6 87 59.8
Cre17.g697650 Chlamydomonas reinhardtii HOM05D001549 ORTHO05D005557 8.7e-26 120.2 87 63.2
SEGI_23018 Sequoiadendron giganteum HOM05D001549 ORTHO05D005557 3.3e-25 118.2 67 76.1
SMO146G0169 Selaginella moellendorffii HOM05D001549 ORTHO05D005557 8.2e-24 113.6 87 59.8
BcaC01g01225 Brassica carinata HOM05D001549 ORTHO05D005557 3.1e-23 111.7 87 63.2
QL02p030564 Quercus lobata HOM05D001549 ORTHO05D005557 3.2e-20 101.7 65 70.8
Glyma.10G288467 Glycine max HOM05D001549 ORTHO05D005557 9.0e-15 83.6 46 82.6
MCO13G269 Micromonas commoda HOM05D001549 ORTHO05D005557 2.9e-13 78.6 90 38.9
PRCOL_00006655 Prasinoderma coloniale HOM05D001549 ORTHO05D005557 1.2e-11 73.2 92 39.1
Sc11g0002660 Simmondsia chinensis HOM05D001549 ORTHO05D003098 3.9e-10 68.2 92 32.6
PSO017G3096 Papaver somniferum HOM05D001549 ORTHO05D003098 5.1e-10 67.8 91 39.6
AUR62007871 Chenopodium quinoa HOM05D001549 ORTHO05D003098 8.8e-10 67.0 92 37.0
Mapoly0056s0087 Marchantia polymorpha HOM05D001549 ORTHO05D003098 1.1e-09 66.6 86 39.5
FvH4_4g29260 Fragaria vesca HOM05D001549 ORTHO05D003098 1.5e-09 66.2 93 35.5
CDE02G1645 Ceratophyllum demersum HOM05D001549 ORTHO05D003098 2.0e-09 65.9 93 35.5
FAN22G1819 Fragaria x ananassa HOM05D001549 ORTHO05D003098 2.0e-09 65.9 93 35.5
FAN12G2224 Fragaria x ananassa HOM05D001549 ORTHO05D003098 2.5e-09 65.5 93 35.5
FAN17G2469 Fragaria x ananassa HOM05D001549 ORTHO05D003098 3.3e-09 65.1 88 36.4
FAN07G2649 Fragaria x ananassa HOM05D001549 ORTHO05D003098 5.7e-09 64.3 92 35.9
Prupe.1G293900 Prunus persica HOM05D001549 ORTHO05D003098 7.4e-09 63.9 88 36.4
Dinv34018 Davidia involucrata HOM05D001549 ORTHO05D003098 9.7e-09 63.5 90 34.4
RcHm_v2.0_Chr4g0437311 Rosa chinensis HOM05D001549 ORTHO05D003098 1.7e-08 62.8 93 35.5
MD13G1056200 Malus domestica HOM05D001549 ORTHO05D003098 4.8e-08 61.2 88 34.1
SMO146G0052 Selaginella moellendorffii HOM05D001549 ORTHO05D003098 1.1e-07 60.1 86 34.9
DCAR_030063 Daucus carota HOM05D001549 ORTHO05D003098 1.4e-07 59.7 88 35.2
CSS0036093 Camellia sinensis var. sinensis HOM05D001549 ORTHO05D003098 9.1e-07 57.0 85 34.1
Actinidia07765 Actinidia chinensis HOM05D001549 ORTHO05D003098 5.9e-06 54.3 90 32.2


User provided reference genes

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