Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.7F4FG4 Arachis hypogaea HOM05D000261 ORTHO05D086671 7.5e-74 280.4 140 100.0
arahy.Tifrunner.gnm1.ann1.94M68K Arachis hypogaea HOM05D000261 ORTHO05D000566 6.3e-12 74.7 50 72.0
arahy.Tifrunner.gnm1.ann1.ZYK677 Arachis hypogaea HOM05D000261 ORTHO05D000566 6.3e-12 74.7 50 72.0
Cpa.g.sc47.29 Carica papaya HOM05D000261 ORTHO05D000566 1.2e-07 60.5 41 65.9
Gohir.A09G087000 Gossypium hirsutum HOM05D000261 ORTHO05D000566 1.6e-07 60.1 49 57.1
PGR119G2503 Punica granatum HOM05D000261 ORTHO05D000566 2.1e-07 59.7 47 59.6
Glyma.11G190800 Glycine max HOM05D000261 ORTHO05D000566 6.1e-07 58.2 45 57.8
Medtr4g056420 Medicago truncatula HOM05D000261 ORTHO05D000566 6.1e-07 58.2 47 53.2
Gohir.D09G086700 Gossypium hirsutum HOM05D000261 ORTHO05D000566 1.0e-06 57.4 49 53.1
Gorai.006G103200 Gossypium raimondii HOM05D000261 ORTHO05D000566 1.0e-06 57.4 49 53.1
Lalb_Chr03g0027841 Lupinus albus HOM05D000261 ORTHO05D000566 1.3e-06 57.0 45 57.8
Glyma.12G083600 Glycine max HOM05D000261 ORTHO05D000566 1.8e-06 56.6 45 55.6
Manes.04G011500 Manihot esculenta HOM05D000261 ORTHO05D000566 1.8e-06 56.6 41 61.0
Atru.chr3.3431 Acer truncatum HOM05D000261 ORTHO05D000566 2.3e-06 56.2 41 65.9
Manes.11G154800 Manihot esculenta HOM05D000261 ORTHO05D000566 2.3e-06 56.2 41 58.5
Migut.N02531 Erythranthe guttata HOM05D000261 ORTHO05D000566 3.0e-06 55.8 49 51.0
Phvul.011G088300 Phaseolus vulgaris HOM05D000261 ORTHO05D000566 3.0e-06 55.8 45 53.3
Lj2A999T40 Lonicera japonica HOM05D000261 ORTHO05D000566 3.9e-06 55.5 50 48.0
Peaxi162Scf00150g00410 Petunia axillaris HOM05D000261 ORTHO05D000566 3.9e-06 55.5 50 50.0
QL01p014190 Quercus lobata HOM05D000261 ORTHO05D000566 3.9e-06 55.5 41 58.5
Thecc.09G295100 Theobroma cacao HOM05D000261 ORTHO05D000566 3.9e-06 55.5 41 56.1
VMungo1127G1206 Vigna mungo HOM05D000261 ORTHO05D000566 3.9e-06 55.5 45 53.3
AL6G33960 Arabidopsis lyrata HOM05D000261 ORTHO05D000566 5.1e-06 55.1 41 53.7
BcaC03g13922 Brassica carinata HOM05D000261 ORTHO05D000566 5.1e-06 55.1 41 58.5
BNapus_Darmor_BZH_scaffold_38p00340 Brassica napus HOM05D000261 ORTHO05D000566 5.1e-06 55.1 41 58.5
C02p11320 Brassica napus HOM05D000261 ORTHO05D000566 5.1e-06 55.1 41 58.5
BolC2t07200H Brassica oleracea HOM05D000261 ORTHO05D000566 5.1e-06 55.1 41 58.5
BraA02t05692Z Brassica rapa HOM05D000261 ORTHO05D000566 5.1e-06 55.1 41 58.5
CANSAT80G2326 Cannabis sativa HOM05D000261 ORTHO05D000566 5.1e-06 55.1 49 51.0
Gohir.A07G106400 Gossypium hirsutum HOM05D000261 ORTHO05D000566 5.1e-06 55.1 41 56.1
Gohir.D07G110300 Gossypium hirsutum HOM05D000261 ORTHO05D000566 5.1e-06 55.1 41 56.1
Gorai.001G118500 Gossypium raimondii HOM05D000261 ORTHO05D000566 5.1e-06 55.1 41 56.1
Lj3g0004350 Lotus japonicus HOM05D000261 ORTHO05D000566 5.1e-06 55.1 45 53.3
Potri.001G213600 Populus trichocarpa HOM05D000261 ORTHO05D000566 5.1e-06 55.1 51 49.0
Sabra04G0148800 Salix brachista HOM05D000261 ORTHO05D000566 5.1e-06 55.1 51 49.0
vmacro03237 Vaccinium macrocarpon HOM05D000261 ORTHO05D000566 5.1e-06 55.1 47 48.9
BcaB08g36401 Brassica carinata HOM05D000261 ORTHO05D000566 6.7e-06 54.7 41 56.1
BcaC04g19605 Brassica carinata HOM05D000261 ORTHO05D000566 6.7e-06 54.7 41 56.1
A10p18170 Brassica napus HOM05D000261 ORTHO05D000566 6.7e-06 54.7 41 56.1
C09p53780 Brassica napus HOM05D000261 ORTHO05D000566 6.7e-06 54.7 41 56.1
BolC9t58253H Brassica oleracea HOM05D000261 ORTHO05D000566 6.7e-06 54.7 41 56.1
BraA10t43892Z Brassica rapa HOM05D000261 ORTHO05D000566 6.7e-06 54.7 41 56.1
Cfa010113 Carpinus fangiana HOM05D000261 ORTHO05D000566 6.7e-06 54.7 47 51.1
Ciclev10028299m.g Citrus clementina HOM05D000261 ORTHO05D000566 6.7e-06 54.7 41 58.5
Ciclev10028725m.g Citrus clementina HOM05D000261 ORTHO05D000566 6.7e-06 54.7 41 58.5
Gohir.D13G228500 Gossypium hirsutum HOM05D000261 ORTHO05D000566 6.7e-06 54.7 49 49.0
Gorai.013G259200 Gossypium raimondii HOM05D000261 ORTHO05D000566 6.7e-06 54.7 49 49.0
Sabra09G0000600 Salix brachista HOM05D000261 ORTHO05D000566 6.7e-06 54.7 47 51.1
TWI75G0065 Tripterygium wilfordii HOM05D000261 ORTHO05D000566 6.7e-06 54.7 41 61.0
Aa31LG1G12870 Aethionema arabicum HOM05D000261 ORTHO05D000566 8.7e-06 54.3 41 53.7
CARHR190720 Cardamine hirsuta HOM05D000261 ORTHO05D000566 8.7e-06 54.3 41 53.7
Thhalv10013365m.g Eutrema salsugineum HOM05D000261 ORTHO05D000566 8.7e-06 54.3 41 53.7
Psat0s3830g0040 Pisum sativum HOM05D000261 ORTHO05D000566 8.7e-06 54.3 45 51.1
Sp6g22570 Schrenkiella parvula HOM05D000261 ORTHO05D000566 8.7e-06 54.3 41 53.7
THA.LOC104810886 Tarenaya hassleriana HOM05D000261 ORTHO05D000566 8.7e-06 54.3 41 56.1


User provided reference genes

Program Settings